Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 4.7e-255 884.0 447 100.0
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 8.0e-154 547.7 455 64.0
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 1.9e-150 536.6 459 63.8
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 8.6e-148 527.7 455 62.4
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 8.9e-145 517.7 456 63.4
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 4.4e-144 515.4 456 62.7
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 3.7e-143 512.3 451 59.6
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 1.9e-142 510.0 448 59.6
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 5.4e-142 508.4 454 61.0
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 6.0e-141 505.0 428 61.7
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 1.7e-140 503.4 455 60.2
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 4.3e-139 498.8 452 60.2
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 2.1e-138 496.5 464 58.6
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 3.4e-136 489.2 454 58.8
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 4.4e-136 488.8 443 60.3
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 6.4e-135 485.0 453 58.7
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 6.4e-135 485.0 455 58.2
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 8.4e-135 484.6 454 58.1
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 8.4e-135 484.6 457 59.1
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 4.2e-134 482.3 459 59.3
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 1.2e-133 480.7 478 58.8
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 3.5e-133 479.2 459 58.8
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 7.8e-133 478.0 449 60.4
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 7.8e-133 478.0 457 58.9
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 1.0e-132 477.6 452 58.6
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 1.7e-132 476.9 458 58.1
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 6.6e-132 474.9 459 58.0
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 3.3e-131 472.6 455 57.1
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 3.3e-131 472.6 442 57.2
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 3.6e-130 469.2 455 57.1
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 1.1e-129 467.6 458 57.6
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 1.1e-129 467.6 456 58.3
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 1.8e-129 466.8 451 57.2
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 2.4e-129 466.5 451 57.2
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 5.8e-128 461.8 395 63.8
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 1.1e-126 457.6 419 59.7
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 5.4e-126 455.3 451 57.0
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 1.6e-125 453.8 469 55.2
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 2.7e-125 453.0 484 54.1
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 3.5e-125 452.6 459 55.6
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 3.5e-125 452.6 459 56.0
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 6.0e-125 451.8 452 56.4
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 1.0e-124 451.1 459 55.6
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 2.3e-124 449.9 471 55.8
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 1.5e-123 447.2 457 56.5
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 2.5e-123 446.4 311 70.7
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 5.6e-123 445.3 462 56.1
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 7.3e-123 444.9 454 56.6
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 7.3e-123 444.9 456 56.8
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 4.8e-122 442.2 459 55.8
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 6.2e-122 441.8 519 51.3
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 1.4e-121 440.7 399 60.7
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 3.4e-120 436.0 321 67.9
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 9.9e-120 434.5 459 51.6
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 2.2e-119 433.3 475 55.2
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 2.9e-119 433.0 465 55.1
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 1.4e-118 430.6 439 55.6
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 1.4e-118 430.6 454 55.1
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 1.9e-118 430.3 455 53.6
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 3.5e-117 426.0 457 54.3
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 3.0e-116 422.9 466 54.7
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.3e-115 419.5 477 52.0
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.3e-115 419.5 478 52.3
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 3.3e-115 419.5 449 53.5
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 8.1e-114 414.8 482 51.9
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 1.8e-113 413.7 450 52.7
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 2.4e-113 413.3 381 58.0
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 7.6e-112 408.3 388 58.2
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 9.9e-112 407.9 335 61.8
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 9.9e-112 407.9 475 52.4
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 1.7e-111 407.1 461 54.7
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 2.1e-109 400.2 462 52.8
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 4.6e-109 399.1 469 52.5
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 7.9e-109 398.3 465 52.7
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 1.3e-108 397.5 463 51.6
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 1.3e-108 397.5 447 52.3
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 3.0e-108 396.4 463 51.6
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 8.7e-108 394.8 467 51.8
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 4.3e-107 392.5 458 51.5
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 4.3e-107 392.5 344 61.0
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 6.9e-105 385.2 438 50.5
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 5.8e-104 382.1 446 50.2
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.4e-102 377.5 358 58.4
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 3.5e-101 372.9 394 54.1
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 2.2e-98 363.6 374 55.1
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 3.1e-97 359.8 247 73.3
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 5.3e-97 359.0 518 43.8
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 6.5e-95 352.1 352 56.0
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.7e-93 346.7 409 49.9
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.8e-89 334.0 414 48.1
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 1.2e-88 331.3 391 48.8
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 1.4e-84 317.8 481 44.1
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 3.9e-84 316.2 434 47.2
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 6.7e-84 315.5 458 41.7
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 7.0e-81 305.4 482 42.1
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 1.7e-79 300.8 277 59.6
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 2.9e-79 300.1 375 48.8
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.4e-76 291.2 474 40.7
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 5.3e-73 279.3 434 43.1
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 2.2e-66 257.3 181 70.7
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 3.4e-59 233.4 370 40.8
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 6.1e-53 212.6 328 39.9
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 5.7e-51 206.1 218 53.2
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 3.1e-44 183.7 389 36.8
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 7.5e-43 179.1 197 52.3
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.7e-34 151.4 179 45.8
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 9.2e-25 119.0 179 42.5
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 6.6e-15 86.3 160 38.1
Aa31LG1G6410 Aethionema arabicum HOM05D007103 ORTHO05D008948 9.6e-14 82.4 103 45.6
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 2.2e-10 71.2 59 61.0
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 8.4e-10 69.3 46 73.9
Ciclev10006333m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.3e-07 62.0 67 55.2
CAN.G166.15 Capsicum annuum HOM05D007103 ORTHO05D008948 1.7e-07 61.6 84 42.9


User provided reference genes

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