Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0048 Ceratophyllum demersum HOM05D005760 ORTHO05D007113 1.6e-88 329.3 157 100.0
CDE02G0175 Ceratophyllum demersum HOM05D003774 ORTHO05D009174 5.2e-31 138.3 81 82.7
Hund27088 Selenicereus undatus HOM05D005760 ORTHO05D007113 2.0e-22 109.8 84 58.3
EL10Ac1g00088 Beta vulgaris HOM05D005760 ORTHO05D007113 3.4e-22 109.0 73 65.8
AUR62004640 Chenopodium quinoa HOM05D005760 ORTHO05D007113 3.4e-22 109.0 102 56.9
AUR62022696 Chenopodium quinoa HOM05D005760 ORTHO05D007113 4.4e-22 108.6 102 55.9
COL.COLO4_04233 Corchorus olitorius HOM05D005760 ORTHO05D007113 4.4e-22 108.6 75 68.0
Prupe.8G057200 Prunus persica HOM05D005760 ORTHO05D007113 5.7e-22 108.2 71 69.0
RcHm_v2.0_Chr6g0272031 Rosa chinensis HOM05D005760 ORTHO05D007113 5.7e-22 108.2 68 69.1
Hma1.2p1_0004F.1_g004040 Hydrangea macrophylla HOM05D005760 ORTHO05D007113 7.5e-22 107.8 73 64.4
Hma1.2p1_0004F.1_g004045 Hydrangea macrophylla HOM05D005760 ORTHO05D007113 7.5e-22 107.8 73 64.4
Sc23g0001270 Simmondsia chinensis HOM05D005760 ORTHO05D007113 1.7e-21 106.7 68 67.6
MD05G1041500 Malus domestica HOM05D005760 ORTHO05D007113 2.2e-21 106.3 69 68.1
TWI34G1956 Tripterygium wilfordii HOM05D005760 ORTHO05D007113 2.2e-21 106.3 69 63.8
Ciclev10000028m.g Citrus clementina HOM05D005760 ORTHO05D007113 3.7e-21 105.5 70 70.0
CAN.G199.9 Capsicum annuum HOM05D005760 ORTHO05D007113 4.8e-21 105.1 113 49.6
ClCG11G008140 Citrullus lanatus HOM05D005760 ORTHO05D007113 6.3e-21 104.8 76 67.1
CsaV3_2G033490 Cucumis sativus L. HOM05D005760 ORTHO05D007113 6.3e-21 104.8 76 67.1
Dinv41715 Davidia involucrata HOM05D005760 ORTHO05D007113 6.3e-21 104.8 76 64.5
Nn1g08372 Nelumbo nucifera HOM05D005760 ORTHO05D007113 6.3e-21 104.8 71 69.0
Thecc.08G184000 Theobroma cacao HOM05D005760 ORTHO05D007113 6.3e-21 104.8 70 68.6
Gohir.A05G250551 Gossypium hirsutum HOM05D005760 ORTHO05D007113 8.3e-21 104.4 75 65.3
Gohir.D05G253200 Gossypium hirsutum HOM05D005760 ORTHO05D007113 8.3e-21 104.4 75 65.3
Gorai.009G263800 Gossypium raimondii HOM05D005760 ORTHO05D007113 8.3e-21 104.4 75 65.3
TAR628G1581 Trochodendron aralioides HOM05D005760 ORTHO05D007113 8.3e-21 104.4 66 71.2
Duzib116G0663 Durio zibethinus HOM05D005760 ORTHO05D007113 1.1e-20 104.0 70 67.1
CANSAT78G0610 Cannabis sativa HOM05D005760 ORTHO05D007113 1.4e-20 103.6 68 67.6
Manes.18G101200 Manihot esculenta HOM05D005760 ORTHO05D007113 1.4e-20 103.6 69 65.2
Sopen06g023840 Solanum pennellii HOM05D005760 ORTHO05D007113 1.8e-20 103.2 113 48.7
Ah.05g178160 Amaranthus hybridus HOM05D005760 ORTHO05D007113 2.4e-20 102.8 68 67.6
Atru.chr13.1758 Acer truncatum HOM05D005760 ORTHO05D007113 3.1e-20 102.4 74 66.2
Actinidia23335 Actinidia chinensis HOM05D005760 ORTHO05D007113 4.1e-20 102.1 66 65.2
CSS0014231 Camellia sinensis var. sinensis HOM05D005760 ORTHO05D007113 4.1e-20 102.1 68 67.6
vmacro12489 Vaccinium macrocarpon HOM05D005760 ORTHO05D007113 7.0e-20 101.3 66 65.2
MD10G1047900 Malus domestica HOM05D005760 ORTHO05D007113 9.1e-20 100.9 65 67.7
GSVIVG01034473001 Vitis vinifera HOM05D005760 ORTHO05D007113 1.2e-19 100.5 67 64.2
Peaxi162Scf00268g01128 Petunia axillaris HOM05D005760 ORTHO05D007113 2.0e-19 99.8 108 48.1
Ca_11749_v3 Cicer arietinum L. HOM05D005760 ORTHO05D007113 3.5e-19 99.0 90 54.4
Lj4C496G3 Lonicera japonica HOM05D005760 ORTHO05D007113 3.5e-19 99.0 76 63.2
Cfa013846 Carpinus fangiana HOM05D005760 ORTHO05D007113 4.5e-19 98.6 65 66.2
PSO170G3854 Papaver somniferum HOM05D005760 ORTHO05D007113 4.5e-19 98.6 102 55.9
Lj4C503G3 Lonicera japonica HOM05D005760 ORTHO05D007113 7.7e-19 97.8 68 67.6
Nitab4.5_0000303g0150 Nicotiana tabacum HOM05D005760 ORTHO05D007113 7.7e-19 97.8 74 60.8
PSO782G3241 Papaver somniferum HOM05D005760 ORTHO05D007113 7.7e-19 97.8 102 54.9
SalBow7G4130 Salvia bowleyana HOM05D005760 ORTHO05D007113 7.7e-19 97.8 74 62.2
MSTRG.25441 Avicennia marina HOM05D005760 ORTHO05D007113 1.0e-18 97.4 74 62.2
arahy.Tifrunner.gnm1.ann1.BNJ0D6 Arachis hypogaea HOM05D005760 ORTHO05D007113 1.3e-18 97.1 69 62.3
arahy.Tifrunner.gnm1.ann1.H1JXTH Arachis hypogaea HOM05D005760 ORTHO05D007113 1.3e-18 97.1 73 58.9
Psat6g094080 Pisum sativum HOM05D005760 ORTHO05D007113 1.3e-18 97.1 73 60.3
Rhsim06G0094000 Rhododendron simsii HOM05D005760 ORTHO05D007113 1.3e-18 97.1 68 64.7
QL02p033685 Quercus lobata HOM05D005760 ORTHO05D007113 1.7e-18 96.7 73 64.4
TPR.G22709 Trifolium pratense HOM05D005760 ORTHO05D007113 1.7e-18 96.7 78 59.0
CiPaw.08G058900 Carya illinoinensis HOM05D005760 ORTHO05D007113 3.8e-18 95.5 65 64.6
Sabra19G0094600 Salix brachista HOM05D005760 ORTHO05D007113 3.8e-18 95.5 75 61.3
Cc10_g10690 Coffea canephora HOM05D005760 ORTHO05D007113 1.1e-17 94.0 67 61.2
Haze_22520 Corylus avellana HOM05D005760 ORTHO05D007113 1.1e-17 94.0 66 65.2
DCAR_001048 Daucus carota HOM05D005760 ORTHO05D007113 1.1e-17 94.0 68 60.3
PGR102G0553 Punica granatum HOM05D005760 ORTHO05D007113 2.5e-17 92.8 76 57.9
VMungo0720G0756 Vigna mungo HOM05D005760 ORTHO05D007113 3.3e-17 92.4 99 51.5
Glyma.02G158100 Glycine max HOM05D005760 ORTHO05D007113 4.2e-17 92.0 79 57.0
Carub.0001s3325 Capsella rubella HOM05D005760 ORTHO05D007113 7.2e-17 91.3 68 60.3
Lj5g0008525 Lotus japonicus HOM05D005760 ORTHO05D007113 1.2e-16 90.5 70 62.9
Aa31LG6G8840 Aethionema arabicum HOM05D005760 ORTHO05D007113 1.6e-16 90.1 73 56.2
Sp1g30370 Schrenkiella parvula HOM05D005760 ORTHO05D007113 1.6e-16 90.1 69 59.4
SpUn0216_0010 Schrenkiella parvula HOM05D005760 ORTHO05D007113 1.6e-16 90.1 69 59.4
Phvul.007G245600 Phaseolus vulgaris HOM05D005760 ORTHO05D007113 2.1e-16 89.7 86 55.8
FvH4_2g11773 Fragaria vesca HOM05D005760 ORTHO05D007113 3.6e-16 89.0 78 59.0
FAN02G3326 Fragaria x ananassa HOM05D005760 ORTHO05D007113 3.6e-16 89.0 73 60.3
FAN24G1577 Fragaria x ananassa HOM05D005760 ORTHO05D007113 3.6e-16 89.0 78 59.0
CARHR034440 Cardamine hirsuta HOM05D005760 ORTHO05D007113 4.7e-16 88.6 73 54.8
unitig_0.g276 Utricularia gibba HOM05D005760 ORTHO05D007113 4.7e-16 88.6 82 52.4
Thhalv10001809m.g Eutrema salsugineum HOM05D005760 ORTHO05D007113 6.1e-16 88.2 69 56.5
BcaB07g33624 Brassica carinata HOM05D005760 ORTHO05D007113 8.0e-16 87.8 69 55.1
BcaC08g43328 Brassica carinata HOM05D005760 ORTHO05D007113 8.0e-16 87.8 67 56.7
A06p02320 Brassica napus HOM05D005760 ORTHO05D007113 8.0e-16 87.8 69 55.1
C06p06800 Brassica napus HOM05D005760 ORTHO05D007113 8.0e-16 87.8 69 55.1
C06p06840 Brassica napus HOM05D005760 ORTHO05D007113 8.0e-16 87.8 69 55.1
BolC6t35790H Brassica oleracea HOM05D005760 ORTHO05D007113 8.0e-16 87.8 69 55.1
BraA06t23439Z Brassica rapa HOM05D005760 ORTHO05D007113 8.0e-16 87.8 69 55.1
ATR0003G024 Amborella trichopoda HOM05D005760 ORTHO05D007113 3.0e-15 85.9 74 56.8
FAN15G1969 Fragaria x ananassa HOM05D005760 ORTHO05D007113 3.0e-15 85.9 73 58.9
Medtr1g050670 Medicago truncatula HOM05D005760 ORTHO05D007113 5.2e-15 85.1 73 56.2
Lalb_Chr03g0036141 Lupinus albus HOM05D005760 ORTHO05D007113 1.5e-14 83.6 69 59.4
AL1G50540 Arabidopsis lyrata HOM05D005760 ORTHO05D007113 2.6e-14 82.8 71 59.2
THA.LOC104806788 Tarenaya hassleriana HOM05D005760 ORTHO05D007113 4.4e-14 82.0 57 64.9
AT1G35660 Arabidopsis thaliana HOM05D005760 ORTHO05D007113 5.7e-14 81.6 70 60.0
Migut.C01256 Erythranthe guttata HOM05D005760 ORTHO05D007113 5.7e-14 81.6 75 52.0
Aqoxy6G00127 Aquilegia oxysepala HOM05D005760 ORTHO05D007113 7.5e-14 81.3 91 49.5
Lsat_1_v5_gn_1_10440 Lactuca sativa HOM05D005760 ORTHO05D007113 9.8e-14 80.9 103 45.6
HanXRQChr04g0107521 Helianthus annuus HOM05D005760 ORTHO05D007113 1.1e-12 77.4 88 50.0
MELO3C008121.2 Cucumis melo HOM05D005760 ORTHO05D007113 8.6e-10 67.8 56 55.4
SEGI_08751 Sequoiadendron giganteum HOM05D005760 ORTHO05D007113 1.1e-09 67.4 65 53.8
SEGI_16135 Sequoiadendron giganteum HOM05D005760 ORTHO05D007113 1.1e-09 67.4 65 53.8
Pp3c15_6360 Physcomitrium patens HOM05D005760 ORTHO05D007113 1.4e-07 60.5 112 34.8
Pp3c15_6380 Physcomitrium patens HOM05D005760 ORTHO05D007113 1.4e-07 60.5 112 34.8
Zm00001eb146280 Zea mays HOM05D005760 ORTHO05D007113 1.4e-07 60.5 110 36.4
AagrBONN_evm.TU.Sc2ySwM_117.2253 Anthoceros agrestis HOM05D005760 ORTHO05D007113 1.2e-06 57.4 66 39.4
SHI09014 Sapria himalayana HOM05D005760 ORTHO05D007113 2.6e-06 56.2 41 56.1


User provided reference genes

Program Settings