Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 4.8e-140 501.1 247 100.0
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 5.7e-101 371.3 235 74.9
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 2.2e-97 359.4 242 72.7
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 2.2e-97 359.4 242 72.7
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 4.7e-95 351.7 243 70.8
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 7.5e-93 344.4 243 70.4
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 9.8e-93 344.0 240 70.4
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 1.3e-92 343.6 241 69.3
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 4.8e-92 341.7 240 69.6
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 8.3e-92 340.9 240 69.6
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 1.8e-91 339.7 235 70.2
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 9.1e-91 337.4 235 70.2
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 9.1e-91 337.4 240 65.8
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 1.2e-90 337.0 238 66.0
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 1.2e-90 337.0 240 65.8
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 2.0e-90 336.3 239 69.9
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.7e-90 335.9 240 67.9
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 2.2e-89 332.8 246 68.7
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 2.9e-89 332.4 233 70.8
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 3.8e-89 332.0 237 67.1
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 5.0e-89 331.6 246 68.3
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 8.5e-89 330.9 240 67.9
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 1.5e-88 330.1 240 64.2
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.5e-88 330.1 239 66.5
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 9.4e-88 327.4 235 68.5
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 1.6e-87 326.6 237 67.1
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 2.7e-87 325.9 240 66.2
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 3.6e-87 325.5 241 66.4
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 4.7e-87 325.1 240 67.1
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 4.7e-87 325.1 239 65.7
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 8.0e-87 324.3 235 66.0
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 1.0e-86 323.9 236 67.4
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 1.0e-86 323.9 240 64.6
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.0e-86 323.9 230 68.7
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 1.0e-86 323.9 235 65.1
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.4e-86 323.6 239 66.1
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 3.0e-86 322.4 240 68.8
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 3.0e-86 322.4 239 65.7
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 3.0e-86 322.4 240 64.6
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 5.2e-86 321.6 240 64.6
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 6.8e-86 321.2 237 64.6
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 1.2e-85 320.5 235 66.0
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 2.0e-85 319.7 233 67.0
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 4.4e-85 318.5 239 65.3
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 7.5e-85 317.8 236 68.6
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 9.8e-85 317.4 240 63.8
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 1.3e-84 317.0 237 66.2
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 1.3e-84 317.0 237 65.4
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 1.3e-84 317.0 236 66.1
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 2.2e-84 316.2 241 62.7
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 2.2e-84 316.2 241 62.7
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 2.8e-84 315.8 241 65.1
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 3.7e-84 315.5 235 65.1
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 3.7e-84 315.5 240 64.2
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 8.3e-84 314.3 235 66.8
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 8.3e-84 314.3 230 66.5
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 4.1e-83 312.0 246 65.4
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 4.1e-83 312.0 244 63.1
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 2.0e-82 309.7 239 62.3
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 2.7e-82 309.3 240 61.7
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 2.7e-82 309.3 235 64.7
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 3.5e-82 308.9 240 61.2
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 1.7e-81 306.6 241 61.8
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 5.0e-81 305.1 236 63.6
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 3.3e-80 302.4 240 60.8
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 3.3e-80 302.4 240 62.1
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 5.5e-80 301.6 240 60.8
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 7.2e-80 301.2 241 61.8
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 4.7e-79 298.5 250 60.4
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 1.4e-78 297.0 242 59.1
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 1.4e-78 297.0 276 56.5
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 2.3e-78 296.2 236 62.3
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 4.0e-78 295.4 231 62.8
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 1.2e-77 293.9 236 60.2
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 1.2e-77 293.9 242 59.5
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 2.6e-77 292.7 242 58.7
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 2.6e-77 292.7 226 63.3
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 2.6e-77 292.7 242 61.2
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 3.4e-77 292.4 236 58.9
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 4.4e-77 292.0 240 59.6
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 4.4e-77 292.0 240 59.2
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 7.5e-77 291.2 242 58.3
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 7.5e-77 291.2 242 58.3
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 7.5e-77 291.2 242 58.3
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 9.8e-77 290.8 236 59.7
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 1.7e-76 290.0 242 57.9
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 1.7e-76 290.0 242 58.3
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 2.2e-76 289.7 242 58.3
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 2.2e-76 289.7 230 63.0
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 6.3e-76 288.1 236 58.5
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 8.3e-76 287.7 231 61.0
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 1.1e-75 287.3 236 58.5
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.1e-75 287.3 236 58.5
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 1.8e-75 286.6 185 73.5
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 2.4e-75 286.2 242 56.6
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 2.4e-75 286.2 242 56.6
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 2.7e-74 282.7 311 51.4
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 5.9e-74 281.6 239 57.3
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 1.7e-73 280.0 246 54.1
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 2.9e-73 279.3 223 61.0
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 1.9e-72 276.6 204 69.1
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 4.7e-71 271.9 232 56.5
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 8.9e-70 267.7 240 58.8
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 3.2e-67 259.2 238 57.1
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 9.2e-67 257.7 240 57.1
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 1.6e-66 256.9 191 67.5
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 1.1e-64 250.8 187 65.2
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 1.6e-63 246.9 237 55.7
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.1e-63 246.5 237 55.7
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 4.7e-63 245.4 237 55.3
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 4.7e-63 245.4 245 53.5
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 2.3e-62 243.0 242 53.7
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.2e-58 230.7 163 66.3
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 2.8e-55 219.5 221 52.0
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 5.2e-54 215.3 183 60.7
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 1.5e-53 213.8 158 65.8
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 2.2e-52 209.9 225 43.1
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 1.7e-49 200.3 137 70.1
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 8.6e-49 198.0 131 71.0
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 3.6e-47 192.6 137 70.1
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 2.7e-42 176.4 134 64.9
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 1.7e-36 157.1 195 42.1
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 3.3e-32 142.9 241 36.5
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 5.8e-21 105.5 78 65.4
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 6.5e-20 102.1 79 58.2
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 1.1e-19 101.3 78 62.8
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 7.1e-19 98.6 79 58.2
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 7.1e-19 98.6 79 58.2
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 2.1e-15 87.0 65 70.8
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 3.5e-10 69.7 58 50.0
Pp3c15_21980 Physcomitrium patens HOM05D002209 ORTHO05D312687 6.9e-06 55.5 42 57.1


User provided reference genes

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