Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0025 Ceratophyllum demersum HOM05D007509 ORTHO05D009525 2.5e-37 158.3 83 100.0
CDE02G4326 Ceratophyllum demersum HOM05D007509 ORTHO05D009525 7.9e-31 136.7 85 90.6
arahy.Tifrunner.gnm1.ann1.KQD9UV Arachis hypogaea HOM05D007509 ORTHO05D009525 1.4e-22 109.4 66 80.3
arahy.Tifrunner.gnm1.ann1.M25UX0 Arachis hypogaea HOM05D007509 ORTHO05D009525 1.8e-22 109.0 66 78.8
arahy.Tifrunner.gnm1.ann1.Z0MF7F Arachis hypogaea HOM05D007509 ORTHO05D009525 1.8e-22 109.0 66 78.8
Nn6g35255 Nelumbo nucifera HOM05D007509 ORTHO05D009525 1.3e-20 102.8 80 65.0
Nn2g13827 Nelumbo nucifera HOM05D007509 ORTHO05D009525 1.7e-20 102.4 82 64.6
Manes.07G043500 Manihot esculenta HOM05D007509 ORTHO05D009525 6.3e-20 100.5 87 63.2
CiPaw.09G170600 Carya illinoinensis HOM05D007509 ORTHO05D009525 1.4e-19 99.4 87 65.5
MD12G1108800 Malus domestica HOM05D007509 ORTHO05D009525 1.4e-19 99.4 71 73.2
Thecc.05G069500 Theobroma cacao HOM05D007509 ORTHO05D009525 3.1e-19 98.2 88 59.1
TAR633G0343 Trochodendron aralioides HOM05D007509 ORTHO05D009525 3.1e-19 98.2 57 78.9
Cc06_g04400 Coffea canephora HOM05D007509 ORTHO05D009525 5.3e-19 97.4 56 85.7
TWI74G1449 Tripterygium wilfordii HOM05D007509 ORTHO05D009525 7.0e-19 97.1 57 80.7
Os02g0823600 Oryza sativa ssp. japonica HOM05D007509 ORTHO05D009525 1.2e-18 96.3 86 61.6
Duzib093G1616 Durio zibethinus HOM05D007509 ORTHO05D009525 1.6e-18 95.9 87 60.9
Zm00001eb190910 Zea mays HOM05D007509 ORTHO05D009525 1.6e-18 95.9 88 58.0
TAR369G0282 Trochodendron aralioides HOM05D007509 ORTHO05D009525 2.0e-18 95.5 62 74.2
Actinidia32487 Actinidia chinensis HOM05D007509 ORTHO05D009525 2.7e-18 95.1 86 59.3
Lj5g0013352 Lotus japonicus HOM05D007509 ORTHO05D009525 2.7e-18 95.1 82 58.5
Gohir.A04G071200 Gossypium hirsutum HOM05D007509 ORTHO05D009525 3.5e-18 94.7 87 60.9
Gorai.009G414000 Gossypium raimondii HOM05D007509 ORTHO05D009525 3.5e-18 94.7 87 60.9
GSVIVG01033662001 Vitis vinifera HOM05D007509 ORTHO05D009525 3.5e-18 94.7 57 80.7
Gohir.D04G109900 Gossypium hirsutum HOM05D007509 ORTHO05D009525 4.5e-18 94.4 87 59.8
CANSAT80G0537 Cannabis sativa HOM05D007509 ORTHO05D009525 5.9e-18 94.0 85 60.0
TWI53G0287 Tripterygium wilfordii HOM05D007509 ORTHO05D009525 5.9e-18 94.0 57 80.7
Cpa.g.sc92.105 Carica papaya HOM05D007509 ORTHO05D009525 7.7e-18 93.6 82 57.3
Phvul.007G148600 Phaseolus vulgaris HOM05D007509 ORTHO05D009525 7.7e-18 93.6 52 84.6
Ciclev10013275m.g Citrus clementina HOM05D007509 ORTHO05D009525 1.0e-17 93.2 57 77.2
Dinv35801 Davidia involucrata HOM05D007509 ORTHO05D009525 1.0e-17 93.2 86 61.6
EL10Ac4g08317 Beta vulgaris HOM05D007509 ORTHO05D009525 1.3e-17 92.8 82 53.7
Gohir.A09G145100 Gossypium hirsutum HOM05D007509 ORTHO05D009525 1.3e-17 92.8 87 59.8
Gorai.006G162100 Gossypium raimondii HOM05D007509 ORTHO05D009525 1.3e-17 92.8 87 60.9
PGR004G0585 Punica granatum HOM05D007509 ORTHO05D009525 1.3e-17 92.8 82 58.5
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 1.7e-17 92.4 84 61.9
Prupe.7G127400 Prunus persica HOM05D007509 ORTHO05D009525 1.7e-17 92.4 57 80.7
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 1.7e-17 92.4 57 75.4
ATR0723G032 Amborella trichopoda HOM05D007509 ORTHO05D009525 2.2e-17 92.0 57 80.7
Glyma.10G054000 Glycine max HOM05D007509 ORTHO05D009525 2.2e-17 92.0 56 78.6
FAN02G1612 Fragaria x ananassa HOM05D007509 ORTHO05D009525 3.8e-17 91.3 57 75.4
Lalb_Chr02g0155761 Lupinus albus HOM05D007509 ORTHO05D009525 3.8e-17 91.3 69 71.0
Medtr7g102320 Medicago truncatula HOM05D007509 ORTHO05D009525 3.8e-17 91.3 65 70.8
Migut.L01714 Erythranthe guttata HOM05D007509 ORTHO05D009525 5.0e-17 90.9 88 58.0
ECA246G0714 Erigeron canadensis HOM05D007509 ORTHO05D009525 6.5e-17 90.5 54 75.9
FAN09G1001 Fragaria x ananassa HOM05D007509 ORTHO05D009525 6.5e-17 90.5 57 73.7
Gohir.D09G141225 Gossypium hirsutum HOM05D007509 ORTHO05D009525 6.5e-17 90.5 87 58.6
QL07p042864 Quercus lobata HOM05D007509 ORTHO05D009525 6.5e-17 90.5 83 62.7
Psat3g041640 Pisum sativum HOM05D007509 ORTHO05D009525 8.5e-17 90.1 57 75.4
Sed0001231 Sechium edule HOM05D007509 ORTHO05D009525 8.5e-17 90.1 57 71.9
HanXRQChr14g0432941 Helianthus annuus HOM05D007509 ORTHO05D009525 1.1e-16 89.7 87 52.9
Rhsim03G0090000 Rhododendron simsii HOM05D007509 ORTHO05D009525 1.9e-16 89.0 56 73.2
MELO3C009368.2 Cucumis melo HOM05D007509 ORTHO05D009525 2.5e-16 88.6 57 73.7
CsaV3_3G036080 Cucumis sativus L. HOM05D007509 ORTHO05D009525 2.5e-16 88.6 57 73.7
Glyma.13G141100 Glycine max HOM05D007509 ORTHO05D009525 2.5e-16 88.6 52 80.8
Atru.chr8.1768 Acer truncatum HOM05D007509 ORTHO05D009525 3.2e-16 88.2 75 61.3
FAN05G4600 Fragaria x ananassa HOM05D007509 ORTHO05D009525 3.2e-16 88.2 57 70.2
FAN05G4982 Fragaria x ananassa HOM05D007509 ORTHO05D009525 3.2e-16 88.2 57 70.2
PSO339G5046 Papaver somniferum HOM05D007509 ORTHO05D009525 3.2e-16 88.2 63 68.3
Psat6g074800 Pisum sativum HOM05D007509 ORTHO05D009525 4.2e-16 87.8 76 64.5
Aqoxy2G01711 Aquilegia oxysepala HOM05D007509 ORTHO05D009525 5.5e-16 87.4 89 55.1
RcHm_v2.0_Chr3g0470531 Rosa chinensis HOM05D007509 ORTHO05D009525 5.5e-16 87.4 55 74.5
Medtr1g063000 Medicago truncatula HOM05D007509 ORTHO05D009525 7.2e-16 87.0 78 59.0
Potri.006G122600 Populus trichocarpa HOM05D007509 ORTHO05D009525 7.2e-16 87.0 68 67.6
TPR.G32808 Trifolium pratense HOM05D001446 ORTHO05D001360 7.2e-16 87.0 65 69.2
vmacro07305 Vaccinium macrocarpon HOM05D007509 ORTHO05D009525 7.2e-16 87.0 65 67.7
Actinidia31324 Actinidia chinensis HOM05D007509 ORTHO05D009525 1.6e-15 85.9 88 55.7
TPR.G31192 Trifolium pratense HOM05D007509 ORTHO05D009525 1.6e-15 85.9 64 68.8
FvH4_6g16590 Fragaria vesca HOM05D007509 ORTHO05D009525 2.1e-15 85.5 57 70.2
FAN14G0331 Fragaria x ananassa HOM05D007509 ORTHO05D009525 2.1e-15 85.5 57 70.2
AUR62019539 Chenopodium quinoa HOM05D007509 ORTHO05D009525 2.7e-15 85.1 66 59.1
AUR62036098 Chenopodium quinoa HOM05D007509 ORTHO05D009525 4.7e-15 84.3 71 54.9
Peaxi162Scf00722g00034 Petunia axillaris HOM05D007509 ORTHO05D009525 1.8e-14 82.4 56 71.4
Aa31LG1G21690 Aethionema arabicum HOM05D007509 ORTHO05D009525 5.2e-14 80.9 75 50.7
CARHR209880 Cardamine hirsuta HOM05D007509 ORTHO05D009525 1.5e-13 79.3 82 48.8
Nitab4.5_0004476g0020 Nicotiana tabacum HOM05D007509 ORTHO05D009525 2.0e-13 79.0 86 50.0
Sp6g39270 Schrenkiella parvula HOM05D007509 ORTHO05D009525 2.0e-13 79.0 69 55.1
Carub.0006s0228 Capsella rubella HOM05D007509 ORTHO05D009525 3.4e-13 78.2 75 50.7
AT5G03460 Arabidopsis thaliana HOM05D007509 ORTHO05D009525 4.4e-13 77.8 75 49.3
Thhalv10015146m.g Eutrema salsugineum HOM05D007509 ORTHO05D009525 1.7e-12 75.9 69 53.6
THA.LOC104816357 Tarenaya hassleriana HOM05D007509 ORTHO05D009525 2.2e-12 75.5 68 54.4
AL6G12840 Arabidopsis lyrata HOM05D007509 ORTHO05D009525 2.8e-12 75.1 69 52.2
PGSC0003DMG400003867 Solanum tuberosum HOM05D007509 ORTHO05D009525 4.8e-12 74.3 87 47.1
Sopen09g003160 Solanum pennellii HOM05D007509 ORTHO05D009525 1.1e-11 73.2 87 46.0
Solyc09g008335.1 Solanum lycopersicum HOM05D007509 ORTHO05D009525 1.8e-11 72.4 87 46.0
C02p01090 Brassica napus HOM05D007509 ORTHO05D009525 3.1e-11 71.6 51 60.8
BolC2t06099H Brassica oleracea HOM05D007509 ORTHO05D009525 3.1e-11 71.6 51 60.8
BraA02t04762Z Brassica rapa HOM05D007509 ORTHO05D009525 3.1e-11 71.6 51 60.8
BolC9t60072H Brassica oleracea HOM05D007509 ORTHO05D009525 5.4e-11 70.9 61 52.5
Sed0008520 Sechium edule HOM05D007509 ORTHO05D009525 3.5e-10 68.2 50 60.0
BcaC06g32063 Brassica carinata HOM05D007509 ORTHO05D009525 1.0e-09 66.6 69 44.9
A10p32560 Brassica napus HOM05D007509 ORTHO05D009525 1.7e-09 65.9 62 50.0
BraA10t45291Z Brassica rapa HOM05D007509 ORTHO05D009525 1.7e-09 65.9 62 50.0
C09p73360 Brassica napus HOM05D007509 ORTHO05D009525 2.2e-09 65.5 69 43.5
unitig_0.g681 Utricularia gibba HOM05D007509 ORTHO05D009525 4.2e-08 61.2 46 65.2
SMO147G0160 Selaginella moellendorffii HOM05D007509 ORTHO05D009525 7.2e-08 60.5 54 51.9
CiPaw.03G172600 Carya illinoinensis HOM05D007509 ORTHO05D009525 2.3e-06 55.5 57 59.6
HPP92_026749 Vanilla planifolia HOM05D007509 ORTHO05D009525 5.2e-06 54.3 58 44.8
Aa31LG3G2340 Aethionema arabicum HOM05D007509 ORTHO05D009525 8.8e-06 53.5 48 50.0


User provided reference genes

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