Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0023 Ceratophyllum demersum HOM05D007562 ORTHO05D009721 3.4e-234 814.7 427 100.0
TAR629G1307 Trochodendron aralioides HOM05D007562 ORTHO05D009721 3.7e-55 219.9 430 37.9
Nn4g24611 Nelumbo nucifera HOM05D007562 ORTHO05D009721 2.6e-53 213.8 340 42.4
MBI10_g06724_MAGBIO Magnolia biondii HOM05D007562 ORTHO05D009721 3.2e-51 206.8 377 37.9
Aqoxy1G01241 Aquilegia oxysepala HOM05D007562 ORTHO05D009721 2.5e-48 197.2 335 39.7
PSO063G7346 Papaver somniferum HOM05D007562 ORTHO05D009721 1.5e-40 171.4 339 38.6
PSO339G1903 Papaver somniferum HOM05D007562 ORTHO05D009721 1.5e-37 161.4 339 36.3
Dinv11774 Davidia involucrata HOM05D007562 ORTHO05D009721 6.1e-34 149.4 323 33.7
QL08p056015 Quercus lobata HOM05D007562 ORTHO05D009721 6.1e-34 149.4 443 31.8
Thecc.10G073300 Theobroma cacao HOM05D007562 ORTHO05D009721 1.0e-33 148.7 323 35.0
GSVIVG01016281001 Vitis vinifera HOM05D007562 ORTHO05D009721 1.4e-33 148.3 422 32.9
TWI63G1657 Tripterygium wilfordii HOM05D007562 ORTHO05D009721 4.4e-32 143.3 338 32.2
CiPaw.01G273100 Carya illinoinensis HOM05D007562 ORTHO05D009721 5.7e-32 142.9 342 33.0
ClCG05G020990 Citrullus lanatus HOM05D007562 ORTHO05D009721 9.7e-32 142.1 381 31.5
Haze_16895 Corylus avellana HOM05D007562 ORTHO05D009721 2.2e-31 141.0 276 35.5
CsaV3_5G036330 Cucumis sativus L. HOM05D007562 ORTHO05D009721 2.8e-31 140.6 383 31.9
Cfa021509 Carpinus fangiana HOM05D007562 ORTHO05D009721 6.3e-31 139.4 323 34.4
Ciclev10033298m.g Citrus clementina HOM05D007562 ORTHO05D009721 2.4e-30 137.5 399 29.6
Duzib114G0316 Durio zibethinus HOM05D007562 ORTHO05D009721 4.1e-30 136.7 396 31.1
MELO3C012431.2 Cucumis melo HOM05D007562 ORTHO05D009721 1.6e-29 134.8 413 30.5
Potri.010G222200 Populus trichocarpa HOM05D007562 ORTHO05D009721 4.5e-29 133.3 309 34.6
Manes.07G100520 Manihot esculenta HOM05D007562 ORTHO05D009721 7.7e-29 132.5 311 34.1
Ciclev10033649m.g Citrus clementina HOM05D007562 ORTHO05D009721 1.0e-28 132.1 316 33.9
COL.COLO4_23667 Corchorus olitorius HOM05D007562 ORTHO05D009721 1.7e-28 131.3 303 35.3
Ciclev10033616m.g Citrus clementina HOM05D007562 ORTHO05D009721 8.5e-28 129.0 316 32.3
Cpa.g.sc53.80 Carica papaya HOM05D007562 ORTHO05D009721 1.9e-27 127.9 317 31.2
Ciclev10033636m.g Citrus clementina HOM05D007562 ORTHO05D009721 1.9e-27 127.9 316 31.0
Prupe.2G214000 Prunus persica HOM05D007562 ORTHO05D009721 2.5e-27 127.5 379 30.3
Ciclev10033468m.g Citrus clementina HOM05D007562 ORTHO05D009721 5.5e-27 126.3 313 31.6
Sc20g0001880 Simmondsia chinensis HOM05D007562 ORTHO05D009721 2.7e-26 124.0 506 27.7
Eucgr.G02827 Eucalyptus grandis HOM05D007562 ORTHO05D009721 8.0e-26 122.5 326 31.6
Ciclev10033702m.g Citrus clementina HOM05D007562 ORTHO05D009721 1.0e-25 122.1 273 33.7
Sed0018277 Sechium edule HOM05D007562 ORTHO05D009721 1.5e-24 118.2 304 31.9
Atru.chr12.774 Acer truncatum HOM05D007562 ORTHO05D009721 4.4e-24 116.7 339 31.9
FvH4_7g19620 Fragaria vesca HOM05D007562 ORTHO05D009721 4.4e-24 116.7 319 28.8
CDE08G0264 Ceratophyllum demersum HOM05D007562 ORTHO05D009721 5.7e-24 116.3 74 81.1
Atru.chr12.749 Acer truncatum HOM05D007562 ORTHO05D009721 9.8e-24 115.5 339 32.2
FAN10G0414 Fragaria x ananassa HOM05D007562 ORTHO05D009721 2.2e-23 114.4 319 28.8
Lalb_Chr19g0129691 Lupinus albus HOM05D007562 ORTHO05D009721 2.2e-23 114.4 310 30.0
Gohir.A06G167500 Gossypium hirsutum HOM05D007562 ORTHO05D009721 8.3e-23 112.5 309 29.8
Gohir.D06G174900 Gossypium hirsutum HOM05D007562 ORTHO05D009721 5.4e-22 109.8 309 29.1
Gorai.010G205300 Gossypium raimondii HOM05D007562 ORTHO05D009721 5.4e-22 109.8 312 29.2
RcHm_v2.0_Chr1g0363431 Rosa chinensis HOM05D007562 ORTHO05D009721 1.2e-21 108.6 319 31.0
FAN01G2123 Fragaria x ananassa HOM05D007562 ORTHO05D009721 2.7e-21 107.5 319 28.5
MD07G1174900 Malus domestica HOM05D007562 ORTHO05D009721 2.7e-21 107.5 332 31.6
Nitab4.5_0000575g0170 Nicotiana tabacum HOM05D007562 ORTHO05D009721 1.3e-20 105.1 310 30.3
Rhsim09G0152200 Rhododendron simsii HOM05D007562 ORTHO05D009721 1.7e-20 104.8 323 29.1
Glyma.16G154800 Glycine max HOM05D007562 ORTHO05D009721 2.9e-20 104.0 308 30.5
VMungo0464G0183 Vigna mungo HOM05D007562 ORTHO05D009721 5.0e-20 103.2 315 30.2
FAN03G1079 Fragaria x ananassa HOM05D007562 ORTHO05D009721 6.5e-20 102.8 319 28.5
Nitab4.5_0010206g0020 Nicotiana tabacum HOM05D007562 ORTHO05D009721 1.1e-19 102.1 326 29.8
Peaxi162Scf00072g00627 Petunia axillaris HOM05D007562 ORTHO05D009721 1.1e-19 102.1 383 27.2
PGR142G4136 Punica granatum HOM05D007562 ORTHO05D009721 1.5e-19 101.7 310 31.9
Carub.0006s1315 Capsella rubella HOM05D007562 ORTHO05D009721 5.5e-19 99.8 420 25.2
Phvul.004G082400 Phaseolus vulgaris HOM05D007562 ORTHO05D009721 5.5e-19 99.8 314 29.3
Zm00001eb077110 Zea mays HOM05D007562 ORTHO05D009721 5.5e-19 99.8 291 30.2
Sp6g29050 Schrenkiella parvula HOM05D007562 ORTHO05D009721 9.4e-19 99.0 308 29.2
CSS0037048 Camellia sinensis var. sinensis HOM05D007562 ORTHO05D009721 1.2e-18 98.6 338 27.8
Ca_04680_v3 Cicer arietinum L. HOM05D007562 ORTHO05D009721 2.7e-18 97.4 388 26.5
TPR.G20136 Trifolium pratense HOM05D007562 ORTHO05D009721 2.7e-18 97.4 406 26.4
arahy.Tifrunner.gnm1.ann1.264L58 Arachis hypogaea HOM05D007562 ORTHO05D009721 3.6e-18 97.1 318 28.0
BolC2t06675H Brassica oleracea HOM05D000286 ORTHO05D009721 3.6e-18 97.1 278 29.9
Thhalv10015291m.g Eutrema salsugineum HOM05D007562 ORTHO05D009721 4.7e-18 96.7 308 28.6
Lj2g0025537 Lotus japonicus HOM05D007562 ORTHO05D009721 4.7e-18 96.7 376 25.5
Medtr6g060178 Medicago truncatula HOM05D007562 ORTHO05D009721 4.7e-18 96.7 432 25.9
Os04g0521600 Oryza sativa ssp. japonica HOM05D007562 ORTHO05D004736 6.1e-18 96.3 281 29.9
CARHR198320 Cardamine hirsuta HOM05D007562 ORTHO05D009721 1.0e-17 95.5 278 29.9
BcaC03g13438 Brassica carinata HOM05D007562 ORTHO05D009721 5.2e-17 93.2 427 26.0
C02p07440 Brassica napus HOM05D007562 ORTHO05D009721 5.2e-17 93.2 447 24.8
DCAR_004783 Daucus carota HOM05D007562 ORTHO05D009721 8.8e-17 92.4 281 26.0
AT5G14990 Arabidopsis thaliana HOM05D007562 ORTHO05D009721 1.2e-16 92.0 338 27.5
A02p02820 Brassica napus HOM05D007562 ORTHO05D009721 2.6e-16 90.9 427 25.8
AL6G25790 Arabidopsis lyrata HOM05D007562 ORTHO05D009721 3.4e-16 90.5 391 26.1
Cc09_g02120 Coffea canephora HOM05D007562 ORTHO05D009721 4.4e-16 90.1 328 26.8
Oeu043937.1 Olea europaea HOM05D007562 ORTHO05D009721 5.7e-16 89.7 283 26.1
Solyc04g049440.2 Solanum lycopersicum HOM05D007562 ORTHO05D009721 5.7e-16 89.7 280 28.9
BraA02t05255Z Brassica rapa HOM05D007562 ORTHO05D009721 7.5e-16 89.4 428 25.7
Aa31LG11G14520 Aethionema arabicum HOM05D007562 ORTHO05D009721 1.1e-11 75.5 309 25.6
Cc09_g02140 Coffea canephora HOM05D007562 ORTHO05D009721 1.4e-09 68.6 197 31.5
ECA233G5285 Erigeron canadensis HOM05D007562 ORTHO05D009721 3.0e-09 67.4 160 33.1
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 2.2e-07 61.2 177 26.0
FAN06G4675 Fragaria x ananassa HOM05D007562 ORTHO05D009721 2.2e-07 61.2 177 26.0
SalBow3G0440 Salvia bowleyana HOM05D007562 ORTHO05D009721 1.4e-06 58.5 202 25.7


User provided reference genes

Program Settings