Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0022 Ceratophyllum demersum HOM05D004131 ORTHO05D004778 4.1e-81 305.1 203 100.0
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 1.7e-50 203.4 203 69.5
Potri.007G139900 Populus trichocarpa HOM05D004131 ORTHO05D004778 1.3e-47 193.7 203 73.4
Sabra07G0117600 Salix brachista HOM05D004131 ORTHO05D004778 5.1e-47 191.8 203 71.9
Sabra07G0113200 Salix brachista HOM05D004131 ORTHO05D004778 6.6e-47 191.4 203 73.4
Dinv18309 Davidia involucrata HOM05D004131 ORTHO05D004778 3.3e-46 189.1 114 82.5
MSTRG.24561 Avicennia marina HOM05D004131 ORTHO05D004778 5.6e-46 188.3 203 73.9
Potri.017G010100 Populus trichocarpa HOM05D004131 ORTHO05D004778 5.6e-46 188.3 203 69.0
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 9.6e-46 187.6 210 61.9
GSVIVG01038193001 Vitis vinifera HOM05D004131 ORTHO05D004778 4.8e-45 185.3 114 81.6
Dinv33225 Davidia involucrata HOM05D004131 ORTHO05D004778 6.2e-45 184.9 113 81.4
ATR0743G176 Amborella trichopoda HOM05D004131 ORTHO05D004778 1.1e-44 184.1 110 87.3
Actinidia18408 Actinidia chinensis HOM05D004131 ORTHO05D004778 1.4e-44 183.7 206 64.6
Nn7g37517 Nelumbo nucifera HOM05D004131 ORTHO05D004778 1.8e-44 183.3 205 72.2
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 3.1e-44 182.6 114 79.8
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 4.0e-44 182.2 216 64.4
Ciclev10022332m.g Citrus clementina HOM05D004131 ORTHO05D004778 4.0e-44 182.2 203 69.0
Lj6C265T11 Lonicera japonica HOM05D004131 ORTHO05D004778 4.0e-44 182.2 114 79.8
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 5.3e-44 181.8 203 64.5
PGSC0003DMG400005367 Solanum tuberosum HOM05D004131 ORTHO05D004778 6.9e-44 181.4 107 85.0
Manes.01G017500 Manihot esculenta HOM05D004131 ORTHO05D004778 9.0e-44 181.0 112 83.0
Cc03_g14990 Coffea canephora HOM05D004131 ORTHO05D004778 1.2e-43 180.6 111 82.0
CsaV3_5G040580 Cucumis sativus L. HOM05D004131 ORTHO05D004778 1.5e-43 180.3 204 71.1
Lalb_Chr16g0384341 Lupinus albus HOM05D004131 ORTHO05D004778 1.5e-43 180.3 114 78.9
Cfa021469 Carpinus fangiana HOM05D004131 ORTHO05D004778 2.0e-43 179.9 111 81.1
Lalb_Chr05g0218801 Lupinus albus HOM05D004131 ORTHO05D004778 2.0e-43 179.9 114 78.1
PSO675G2278 Papaver somniferum HOM05D004131 ORTHO05D004778 2.0e-43 179.9 114 79.8
Solyc12g019470.2 Solanum lycopersicum HOM05D004131 ORTHO05D004778 2.0e-43 179.9 203 70.9
TPR.G23549 Trifolium pratense HOM05D004131 ORTHO05D004778 2.0e-43 179.9 201 73.1
Gorai.011G132700 Gossypium raimondii HOM05D004131 ORTHO05D004778 2.6e-43 179.5 113 79.6
Peaxi162Scf00483g00111 Petunia axillaris HOM05D004131 ORTHO05D004778 3.4e-43 179.1 103 85.4
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 5.8e-43 178.3 114 78.9
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 5.8e-43 178.3 114 78.9
Gohir.A10G146200 Gossypium hirsutum HOM05D004131 ORTHO05D004778 5.8e-43 178.3 113 78.8
Gohir.D10G120800 Gossypium hirsutum HOM05D004131 ORTHO05D004778 5.8e-43 178.3 113 78.8
TWI38G2196 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 5.8e-43 178.3 111 80.2
unitig_8.g3637 Utricularia gibba HOM05D004131 ORTHO05D004778 5.8e-43 178.3 111 82.0
HanXRQChr02g0059071 Helianthus annuus HOM05D004131 ORTHO05D004778 7.6e-43 177.9 102 86.3
Psat7g119160 Pisum sativum HOM05D004131 ORTHO05D004778 7.6e-43 177.9 106 84.9
FAN28G1052 Fragaria x ananassa HOM05D004131 ORTHO05D004778 9.9e-43 177.6 111 80.2
CAN.G448.4 Capsicum annuum HOM05D004131 ORTHO05D004778 1.3e-42 177.2 103 84.5
Lsat_1_v5_gn_7_67880 Lactuca sativa HOM05D004131 ORTHO05D004778 1.3e-42 177.2 208 69.2
MBI07_g36705_MAGBIO Magnolia biondii HOM05D004131 ORTHO05D004778 1.3e-42 177.2 106 85.8
Phvul.003G059400 Phaseolus vulgaris HOM05D004131 ORTHO05D004778 1.3e-42 177.2 106 84.0
Sopen12g009750 Solanum pennellii HOM05D004131 ORTHO05D004778 1.3e-42 177.2 107 83.2
CSS0004184 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 1.7e-42 176.8 203 70.4
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 1.7e-42 176.8 114 78.1
CSS0028329 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.2e-42 176.4 112 79.5
Glyma.02G138900 Glycine max HOM05D004131 ORTHO05D004778 2.2e-42 176.4 114 78.1
Glyma.07G206100 Glycine max HOM05D004131 ORTHO05D004778 2.2e-42 176.4 112 82.1
HPP92_023727 Vanilla planifolia HOM05D004131 ORTHO05D004778 2.9e-42 176.0 114 80.7
Medtr4g087630 Medicago truncatula HOM05D004131 ORTHO05D004778 3.8e-42 175.6 201 71.6
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 4.9e-42 175.3 114 76.3
FvH4_1g00470 Fragaria vesca HOM05D004131 ORTHO05D004778 4.9e-42 175.3 111 79.3
Nitab4.5_0000064g0030 Nicotiana tabacum HOM05D004131 ORTHO05D004778 4.9e-42 175.3 103 83.5
Nitab4.5_0005089g0010 Nicotiana tabacum HOM05D004131 ORTHO05D004778 4.9e-42 175.3 103 83.5
COL.COLO4_04655 Corchorus olitorius HOM05D004131 ORTHO05D004778 8.4e-42 174.5 110 79.1
FAN26G1335 Fragaria x ananassa HOM05D004131 ORTHO05D004778 8.4e-42 174.5 109 80.7
PSO017G4173 Papaver somniferum HOM05D004131 ORTHO05D004778 8.4e-42 174.5 228 65.4
Hund12374 Selenicereus undatus HOM05D004131 ORTHO05D004778 1.1e-41 174.1 103 83.5
Haze_11173 Corylus avellana HOM05D004131 ORTHO05D004778 1.4e-41 173.7 113 78.8
Haze_11178 Corylus avellana HOM05D004131 ORTHO05D004778 1.4e-41 173.7 113 78.8
Aqoxy2G04165 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 1.9e-41 173.3 113 76.1
FAN23G0024 Fragaria x ananassa HOM05D004131 ORTHO05D004778 1.9e-41 173.3 107 81.3
ECA130G0002 Erigeron canadensis HOM05D004131 ORTHO05D004778 2.4e-41 172.9 114 75.4
RcHm_v2.0_Chr2g0084981 Rosa chinensis HOM05D004131 ORTHO05D004778 3.2e-41 172.6 107 81.3
Duzib212G0438 Durio zibethinus HOM05D004131 ORTHO05D004778 4.2e-41 172.2 112 75.9
CiPaw.01G198800 Carya illinoinensis HOM05D004131 ORTHO05D004778 5.5e-41 171.8 103 84.5
MD02G1003900 Malus domestica HOM05D004131 ORTHO05D004778 5.5e-41 171.8 113 77.9
MELO3C022231.2 Cucumis melo HOM05D004131 ORTHO05D004778 7.1e-41 171.4 114 78.1
Actinidia28972 Actinidia chinensis HOM05D004131 ORTHO05D004778 9.3e-41 171.0 103 82.5
CSS0000211 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 9.3e-41 171.0 103 82.5
CSS0046112 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 9.3e-41 171.0 103 82.5
ECA233G3286 Erigeron canadensis HOM05D004131 ORTHO05D004778 9.3e-41 171.0 102 82.4
MD15G1147200 Malus domestica HOM05D004131 ORTHO05D004778 1.2e-40 170.6 107 80.4
CiPaw.02G123300 Carya illinoinensis HOM05D004131 ORTHO05D004778 1.6e-40 170.2 102 83.3
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.6e-40 170.2 106 81.1
TAR362G1052 Trochodendron aralioides HOM05D004131 ORTHO05D004778 1.6e-40 170.2 111 78.4
SalBow3G2571 Salvia bowleyana HOM05D004131 ORTHO05D004778 2.1e-40 169.9 103 81.6
CANSAT56G2001 Cannabis sativa HOM05D004131 ORTHO05D004778 2.7e-40 169.5 102 82.4
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 3.5e-40 169.1 106 80.2
Eucgr.G01598 Eucalyptus grandis HOM05D004131 ORTHO05D004778 4.6e-40 168.7 101 81.2
Eucgr.L00027 Eucalyptus grandis HOM05D004131 ORTHO05D004778 4.6e-40 168.7 101 81.2
Sc13g0007290 Simmondsia chinensis HOM05D004131 ORTHO05D004778 7.9e-40 167.9 101 81.2
Prupe.7G267400 Prunus persica HOM05D004131 ORTHO05D004778 1.0e-39 167.5 121 72.7
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 3.0e-39 166.0 113 75.2
Sabra17G0009400 Salix brachista HOM05D004131 ORTHO05D004778 3.0e-39 166.0 138 64.5
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 3.0e-39 166.0 106 78.3
SalBow6G7192 Salvia bowleyana HOM05D004131 ORTHO05D004778 1.1e-38 164.1 112 77.7
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 1.1e-38 164.1 106 75.5
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.5e-38 163.7 103 78.6
Zm00001eb425720 Zea mays HOM05D004131 ORTHO05D004778 1.5e-38 163.7 105 80.0
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 1.9e-38 163.3 106 76.4
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.9e-38 163.3 113 73.5
Ah.13g073340 Amaranthus hybridus HOM05D004131 ORTHO05D004778 3.3e-38 162.5 112 73.2
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 4.3e-38 162.2 211 58.3
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 5.6e-38 161.8 204 59.8
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 7.4e-38 161.4 106 74.5
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 9.6e-38 161.0 106 75.5
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 9.6e-38 161.0 114 71.1
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 1.3e-37 160.6 114 71.9
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 1.3e-37 160.6 114 71.1
AUR62002422 Chenopodium quinoa HOM05D004131 ORTHO05D004778 1.3e-37 160.6 115 73.0
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea HOM05D004131 ORTHO05D004778 1.6e-37 160.2 138 65.9
EL10Ac3g06119 Beta vulgaris HOM05D004131 ORTHO05D004778 1.6e-37 160.2 103 74.8
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 1.6e-37 160.2 107 74.8
AUR62023766 Chenopodium quinoa HOM05D004131 ORTHO05D004778 1.6e-37 160.2 115 73.0
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 2.8e-37 159.5 207 65.2
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 2.4e-36 156.4 108 72.2
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 2.4e-36 156.4 108 72.2
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 2.4e-36 156.4 108 72.2
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 2.4e-36 156.4 108 72.2
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 9.0e-36 154.5 105 72.4
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 9.0e-36 154.5 105 72.4
Ah.07g202990 Amaranthus hybridus HOM05D004131 ORTHO05D004778 1.5e-35 153.7 102 73.5
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis HOM05D004131 ORTHO05D004778 4.5e-35 152.1 112 67.0
Mapoly0055s0100 Marchantia polymorpha HOM05D004131 ORTHO05D004778 5.8e-35 151.8 113 67.3
SMO364G0381 Selaginella moellendorffii HOM05D004131 ORTHO05D004778 2.5e-33 146.4 116 69.0
Pp3c3_18840 Physcomitrium patens HOM05D004131 ORTHO05D004778 5.5e-33 145.2 118 66.1
vmacro15701 Vaccinium macrocarpon HOM05D004131 ORTHO05D004778 4.6e-32 142.1 164 51.2
Lju470A13T20 Lonicera japonica HOM05D004131 ORTHO05D004778 8.7e-31 137.9 188 46.8
PGR042G3815 Punica granatum HOM05D004131 ORTHO05D004778 7.4e-30 134.8 78 87.2
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 2.8e-29 132.9 85 78.8
Rhsim02G0086100 Rhododendron simsii HOM05D004131 ORTHO05D004778 1.4e-28 130.6 191 43.5
Sed0002263 Sechium edule HOM05D004131 ORTHO05D004778 1.2e-27 127.5 84 78.6
Lju470A13G17 Lonicera japonica HOM05D004131 ORTHO05D004778 2.6e-27 126.3 80 80.0
Aqoxy604s001 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 5.9e-27 125.2 124 58.9
Actinidia11437 Actinidia chinensis HOM05D004131 ORTHO05D004778 4.2e-25 119.0 71 77.5
SEGI_19170 Sequoiadendron giganteum HOM05D004131 ORTHO05D004778 5.5e-25 118.6 85 70.6
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 9.3e-25 117.9 85 69.4
RhsimUnG0015600 Rhododendron simsii HOM05D004131 ORTHO05D004778 1.2e-24 117.5 225 36.9
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 2.7e-24 116.3 85 68.2
QL10p058548 Quercus lobata HOM05D004131 ORTHO05D004778 1.5e-22 110.5 65 83.1
QL10p059325 Quercus lobata HOM05D004131 ORTHO05D004778 1.5e-22 110.5 65 83.1
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.8e-20 103.6 68 76.5
Lj6C255T9 Lonicera japonica HOM05D004131 ORTHO05D004778 2.0e-19 100.1 78 69.2
Oeu050314.3 Olea europaea HOM05D004131 ORTHO05D004778 7.7e-19 98.2 225 55.1
CBR_g6538 Chara braunii HOM05D004131 ORTHO05D004778 1.0e-18 97.8 79 63.3
Cre16.g660850 Chlamydomonas reinhardtii HOM05D004131 ORTHO05D004778 2.5e-17 93.2 114 49.1
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 4.2e-17 92.4 81 61.7
BraA09t40640Z Brassica rapa HOM05D004131 ORTHO05D004778 4.2e-17 92.4 80 62.5
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 1.2e-16 90.9 158 50.6
ClCG08G000030 Citrullus lanatus HOM05D004131 ORTHO05D004778 2.3e-15 86.7 104 54.8
SGA_v2.0_scaffold37G14924 Striga asiatica HOM05D004131 ORTHO05D004778 1.5e-14 84.0 256 39.8
BcaC07g40508 Brassica carinata HOM05D004131 ORTHO05D004778 1.8e-12 77.0 77 55.8
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 1.8e-12 77.0 77 55.8
BolC8t51078H Brassica oleracea HOM05D004131 ORTHO05D004778 1.8e-12 77.0 77 55.8
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 1.7e-10 70.5 51 72.5
Thecc.04G162100 Theobroma cacao HOM05D004131 ORTHO05D004778 2.9e-10 69.7 54 72.2
Sed0017538 Sechium edule HOM05D004131 ORTHO05D004778 5.0e-10 68.9 34 88.2
Lju470A13T22 Lonicera japonica HOM05D004131 ORTHO05D004778 7.2e-09 65.1 51 68.6
QL10p059329 Quercus lobata HOM05D004131 ORTHO05D004778 9.4e-09 64.7 44 77.3
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 1.2e-08 64.3 93 45.2
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 2.3e-07 60.1 45 73.3
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 3.3e-06 56.2 40 75.0
Zm00001eb027620 Zea mays HOM05D002020 ORTHO05D002046 4.4e-06 55.8 41 70.7
MCO01G557 Micromonas commoda HOM05D004131 ORTHO05D004778 9.7e-06 54.7 75 45.3


User provided reference genes

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