Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G2080 Ceratophyllum demersum HOM05D007513 ORTHO05D008148 3.5e-33 144.4 76 100.0
CsaV3_3G041080 Cucumis sativus L. HOM05D007513 ORTHO05D008148 9.2e-18 93.2 77 63.6
TAR381G0870 Trochodendron aralioides HOM05D001879 ORTHO05D007648 1.3e-16 89.4 66 65.2
CiPaw.02G003300 Carya illinoinensis HOM05D007513 ORTHO05D008148 2.3e-16 88.6 72 65.3
Manes.13G112700 Manihot esculenta HOM05D007513 ORTHO05D008148 3.0e-16 88.2 71 64.8
ClCG10G015420 Citrullus lanatus HOM05D007513 ORTHO05D008148 6.6e-16 87.0 63 66.7
Aqoxy7G03437 Aquilegia oxysepala HOM05D007513 ORTHO05D008148 2.5e-15 85.1 62 69.4
Dinv04064 Davidia involucrata HOM05D007513 ORTHO05D008148 7.3e-15 83.6 60 66.7
Hma1.2p1_0730F.1_g209790 Hydrangea macrophylla HOM05D007513 ORTHO05D008148 9.5e-15 83.2 63 66.7
CSS0045444 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 1.2e-14 82.8 73 54.8
Eucgr.A01208 Eucalyptus grandis HOM05D007513 ORTHO05D008148 1.2e-14 82.8 58 69.0
CANSAT01G0833 Cannabis sativa HOM05D007513 ORTHO05D008148 1.6e-14 82.4 57 70.2
Dinv26918 Davidia involucrata HOM05D007513 ORTHO05D008148 1.6e-14 82.4 58 69.0
Actinidia03699 Actinidia chinensis HOM05D007513 ORTHO05D008148 2.1e-14 82.0 73 54.8
TWI73G0368 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 2.8e-14 81.6 60 66.7
CSS0003656 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 3.6e-14 81.3 73 54.8
TWI09G0373 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 3.6e-14 81.3 68 58.8
HanXRQChr08g0219071 Helianthus annuus HOM05D007513 ORTHO05D008148 6.2e-14 80.5 72 59.7
HPP92_010626 Vanilla planifolia HOM05D007513 ORTHO05D008148 6.2e-14 80.5 60 65.0
HPP92_010652 Vanilla planifolia HOM05D007513 ORTHO05D008148 6.2e-14 80.5 60 65.0
unitig_0.g544 Utricularia gibba HOM05D007513 ORTHO05D008148 8.1e-14 80.1 73 53.4
Atru.chr3.182 Acer truncatum HOM05D007513 ORTHO05D008148 1.1e-13 79.7 70 57.1
HanXRQChr08g0219141 Helianthus annuus HOM05D007513 ORTHO05D008148 1.1e-13 79.7 72 58.3
vmacro14398 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 1.4e-13 79.3 73 56.2
ECA233G3995 Erigeron canadensis HOM05D007513 ORTHO05D008148 1.8e-13 79.0 71 57.7
TPR.G24448 Trifolium pratense HOM05D007513 ORTHO05D008148 1.8e-13 79.0 59 67.8
Atru.chr3.153 Acer truncatum HOM05D007513 ORTHO05D008148 2.4e-13 78.6 70 55.7
Lsat_1_v5_gn_8_17020 Lactuca sativa HOM05D007513 ORTHO05D008148 3.1e-13 78.2 63 60.3
CSS0005454 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 4.0e-13 77.8 73 52.1
CSS0011696 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 4.0e-13 77.8 73 52.1
Lsat_1_v5_gn_8_19701 Lactuca sativa HOM05D007513 ORTHO05D008148 4.0e-13 77.8 63 60.3
Potri.009G004400 Populus trichocarpa HOM05D007513 ORTHO05D008148 4.0e-13 77.8 72 56.9
Rhsim11G0028000 Rhododendron simsii HOM05D007513 ORTHO05D008148 4.0e-13 77.8 61 62.3
Ciclev10023109m.g Citrus clementina HOM05D007513 ORTHO05D008148 5.2e-13 77.4 58 67.2
Cc04_g16170 Coffea canephora HOM05D007513 ORTHO05D008148 5.2e-13 77.4 60 61.7
MELO3C030975.2 Cucumis melo HOM05D007513 ORTHO05D008148 5.2e-13 77.4 55 65.5
SGA_v2.0_scaffold486G52374 Striga asiatica HOM05D007513 ORTHO05D008148 5.2e-13 77.4 57 64.9
DCAR_017173 Daucus carota HOM05D007513 ORTHO05D008148 6.8e-13 77.0 57 70.2
Sed0010624 Sechium edule HOM05D007513 ORTHO05D008148 6.8e-13 77.0 58 63.8
Duzib264G1124 Durio zibethinus HOM05D007513 ORTHO05D008148 8.9e-13 76.6 58 67.2
Thecc.01G071100 Theobroma cacao HOM05D007513 ORTHO05D008148 1.5e-12 75.9 70 54.3
Ca_18552_v3 Cicer arietinum L. HOM05D007513 ORTHO05D008148 2.0e-12 75.5 59 64.4
Medtr4g088715 Medicago truncatula HOM05D007513 ORTHO05D008148 2.6e-12 75.1 57 64.9
GSVIVG01023476001 Vitis vinifera HOM05D007513 ORTHO05D008148 2.6e-12 75.1 69 56.5
Os03g0205150 Oryza sativa ssp. japonica HOM05D007513 ORTHO05D008148 3.4e-12 74.7 73 52.1
Glyma.06G321800 Glycine max HOM05D007513 ORTHO05D008148 4.4e-12 74.3 67 62.7
Gohir.D03G027900 Gossypium hirsutum HOM05D007513 ORTHO05D008148 4.4e-12 74.3 58 63.8
PGR102G1378 Punica granatum HOM05D007513 ORTHO05D008148 4.4e-12 74.3 71 53.5
AUR62016920 Chenopodium quinoa HOM05D007513 ORTHO05D008148 7.6e-12 73.6 72 54.2
SalBow6G0964 Salvia bowleyana HOM05D007513 ORTHO05D008148 7.6e-12 73.6 62 61.3
vmacro07203 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 7.6e-12 73.6 57 63.2
MD15G1295400 Malus domestica HOM05D007513 ORTHO05D008148 9.9e-12 73.2 60 61.7
Psat6g076840 Pisum sativum HOM05D007513 ORTHO05D008148 1.3e-11 72.8 56 64.3
DCAR_013160 Daucus carota HOM05D007513 ORTHO05D008148 1.7e-11 72.4 57 64.9
Lalb_Chr08g0235081 Lupinus albus HOM05D007513 ORTHO05D008148 1.7e-11 72.4 72 55.6
Psat6g024240 Pisum sativum HOM05D007513 ORTHO05D008148 1.7e-11 72.4 62 59.7
Sc16g0003000 Simmondsia chinensis HOM05D007513 ORTHO05D008148 1.7e-11 72.4 71 50.7
MD02G1183800 Malus domestica HOM05D007513 ORTHO05D008148 3.8e-11 71.2 58 62.1
arahy.Tifrunner.gnm1.ann1.P2RW0X Arachis hypogaea HOM05D007513 ORTHO05D008148 4.9e-11 70.9 72 52.8
arahy.Tifrunner.gnm1.ann1.QIRY5C Arachis hypogaea HOM05D007513 ORTHO05D008148 4.9e-11 70.9 72 52.8
Nitab4.5_0000714g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 4.9e-11 70.9 66 56.1
arahy.Tifrunner.gnm1.ann1.8F1CK2 Arachis hypogaea HOM05D007513 ORTHO05D008148 6.4e-11 70.5 57 61.4
arahy.Tifrunner.gnm1.ann1.LDCV9W Arachis hypogaea HOM05D007513 ORTHO05D008148 6.4e-11 70.5 57 61.4
Lalb_Chr24g0403261 Lupinus albus HOM05D007513 ORTHO05D008148 6.4e-11 70.5 72 54.2
Ah.14g088990 Amaranthus hybridus HOM05D007513 ORTHO05D008148 1.4e-10 69.3 71 52.1
Nitab4.5_0001417g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 1.4e-10 69.3 58 56.9
Prupe.6G222400 Prunus persica HOM05D007513 ORTHO05D008148 1.4e-10 69.3 57 61.4
Phvul.005G004100 Phaseolus vulgaris HOM05D007513 ORTHO05D008148 1.9e-10 68.9 67 56.7
Glyma.04G112900 Glycine max HOM05D007513 ORTHO05D008148 3.2e-10 68.2 67 58.2
VMungo1080G1633 Vigna mungo HOM05D007513 ORTHO05D008148 4.1e-10 67.8 67 58.2
Cpa.g.sc6.31 Carica papaya HOM05D007513 ORTHO05D008148 3.5e-09 64.7 49 63.3
Peaxi162Scf00118g02024 Petunia axillaris HOM05D007513 ORTHO05D008148 4.6e-09 64.3 60 51.7
Aa31LG6G14500 Aethionema arabicum HOM05D007513 ORTHO05D008148 6.0e-09 63.9 68 48.5
arahy.Tifrunner.gnm1.ann1.S3QGNL Arachis hypogaea HOM05D000640 ORTHO05D008148 7.8e-09 63.5 46 67.4
EL10Ac8g20627 Beta vulgaris HOM05D007513 ORTHO05D008148 7.8e-09 63.5 71 45.1
Carub.0004s0224 Capsella rubella HOM05D007513 ORTHO05D008148 1.7e-08 62.4 66 50.0
COL.COLO4_11560 Corchorus olitorius HOM05D007513 ORTHO05D008148 3.0e-08 61.6 70 48.6
THA.LOC104807627 Tarenaya hassleriana HOM05D007513 ORTHO05D008148 3.0e-08 61.6 64 51.6
Thhalv10027185m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 3.9e-08 61.2 69 42.0
Solyc03g044080.4 Solanum lycopersicum HOM05D007513 ORTHO05D008148 3.9e-08 61.2 71 45.1
C07p62480 Brassica napus HOM05D014277 ORTHO05D008148 5.1e-08 60.8 50 58.0
A08p22690 Brassica napus HOM05D007513 ORTHO05D008148 6.6e-08 60.5 51 54.9
BcaNung02934 Brassica carinata HOM05D014277 ORTHO05D008148 8.7e-08 60.1 69 44.9
SEGI_38697 Sequoiadendron giganteum HOM05D007513 ORTHO05D008148 8.7e-08 60.1 63 49.2
arahy.Tifrunner.gnm1.ann1.X3Z0KH Arachis hypogaea HOM05D003009 ORTHO05D008148 1.1e-07 59.7 65 50.8
PGSC0003DMG400014868 Solanum tuberosum HOM05D007513 ORTHO05D008148 1.1e-07 59.7 69 46.4
BcaC01g00397 Brassica carinata HOM05D007513 ORTHO05D008148 1.9e-07 58.9 50 54.0
C03p79260 Brassica napus HOM05D007513 ORTHO05D008148 1.9e-07 58.9 50 54.0
BolC3t20170H Brassica oleracea HOM05D007513 ORTHO05D008148 1.9e-07 58.9 50 54.0
BraA08t34236Z Brassica rapa HOM05D007513 ORTHO05D008148 1.9e-07 58.9 50 54.0
PSO170G3772 Papaver somniferum HOM05D007513 ORTHO05D008148 1.9e-07 58.9 62 51.6
Thhalv10000379m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 2.5e-07 58.5 63 46.0
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 3.3e-07 58.2 55 52.7
arahy.Tifrunner.gnm1.ann1.N7EVBW Arachis hypogaea HOM05D007513 ORTHO05D008148 4.3e-07 57.8 44 63.6
BcaB03g12338 Brassica carinata HOM05D007513 ORTHO05D008148 5.6e-07 57.4 50 52.0
BcaNung02064 Brassica carinata HOM05D014277 ORTHO05D008148 5.6e-07 57.4 50 54.0
arahy.Tifrunner.gnm1.ann1.QIF42D Arachis hypogaea HOM05D007513 ORTHO05D008148 7.3e-07 57.0 61 49.2
arahy.Tifrunner.gnm1.ann1.NLBN4J Arachis hypogaea HOM05D007513 ORTHO05D008148 3.6e-06 54.7 62 50.0
TPR.G16351 Trifolium pratense HOM05D007513 ORTHO05D008148 3.6e-06 54.7 130 34.6


User provided reference genes

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