Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G2034 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 1.0e-51 206.5 102 100.0
CANSAT01G3178 Cannabis sativa HOM05D005482 ORTHO05D006502 7.7e-36 153.7 98 76.5
GSVIVG01002523001 Vitis vinifera HOM05D005482 ORTHO05D006502 8.0e-33 143.7 99 69.7
Hund16521 Selenicereus undatus HOM05D005482 ORTHO05D006502 1.0e-32 143.3 98 73.5
PGSC0003DMG400014586 Solanum tuberosum HOM05D005482 ORTHO05D006502 1.8e-32 142.5 102 68.6
Manes.12G125300 Manihot esculenta HOM05D005482 ORTHO05D006502 6.8e-32 140.6 101 69.3
CSS0020800 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 8.8e-32 140.2 100 73.0
Lj2A532G30 Lonicera japonica HOM05D005482 ORTHO05D006502 2.6e-31 138.7 102 65.7
Nitab4.5_0000128g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 2.6e-31 138.7 102 67.6
Thecc.01G089100 Theobroma cacao HOM05D005482 ORTHO05D006502 2.6e-31 138.7 105 65.7
Ciclev10025202m.g Citrus clementina HOM05D005482 ORTHO05D006502 3.4e-31 138.3 98 66.3
Nitab4.5_0007769g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 3.4e-31 138.3 102 66.7
Dinv36943 Davidia involucrata HOM05D005482 ORTHO05D006502 5.7e-31 137.5 106 67.0
FvH4_1g19490 Fragaria vesca HOM05D005482 ORTHO05D006502 9.8e-31 136.7 98 67.3
FAN19G3176 Fragaria x ananassa HOM05D005482 ORTHO05D006502 9.8e-31 136.7 98 67.3
FAN26G3253 Fragaria x ananassa HOM05D005482 ORTHO05D006502 9.8e-31 136.7 98 67.3
FAN28G0477 Fragaria x ananassa HOM05D005482 ORTHO05D006502 9.8e-31 136.7 98 67.3
vmacro18548 Vaccinium macrocarpon HOM05D005482 ORTHO05D006502 9.8e-31 136.7 98 71.4
FAN23G0007 Fragaria x ananassa HOM05D005482 ORTHO05D006502 1.7e-30 136.0 98 67.3
COL.COLO4_27370 Corchorus olitorius HOM05D005482 ORTHO05D006502 3.7e-30 134.8 107 62.6
CAN.G581.10 Capsicum annuum HOM05D005482 ORTHO05D006502 4.8e-30 134.4 98 69.4
CiPaw.10G105100 Carya illinoinensis HOM05D005482 ORTHO05D006502 4.8e-30 134.4 104 64.4
Sed0012268 Sechium edule HOM05D005482 ORTHO05D006502 4.8e-30 134.4 104 65.4
Gohir.A12G084900 Gossypium hirsutum HOM05D005482 ORTHO05D006502 6.3e-30 134.0 103 65.0
Sopen05g029760 Solanum pennellii HOM05D005482 ORTHO05D006502 6.3e-30 134.0 102 66.7
QL06p035944 Quercus lobata HOM05D005482 ORTHO05D006502 1.4e-29 132.9 100 69.0
DCAR_003442 Daucus carota HOM05D005482 ORTHO05D006502 1.8e-29 132.5 102 65.7
Gorai.008G093000 Gossypium raimondii HOM05D005482 ORTHO05D006502 1.8e-29 132.5 103 64.1
PSO210G6830 Papaver somniferum HOM05D005482 ORTHO05D006502 1.8e-29 132.5 98 67.3
Solyc05g051370.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 1.8e-29 132.5 102 65.7
TWI74G1080 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 1.8e-29 132.5 99 67.7
HanXRQChr12g0368991 Helianthus annuus HOM05D005482 ORTHO05D006502 2.4e-29 132.1 99 69.7
Peaxi162Scf01142g00001 Petunia axillaris HOM05D005482 ORTHO05D006502 4.1e-29 131.3 99 67.7
PSO170G0154 Papaver somniferum HOM05D005482 ORTHO05D006502 5.4e-29 131.0 98 66.3
MBI16_g31257_MAGBIO Magnolia biondii HOM05D005482 ORTHO05D006502 1.6e-28 129.4 96 69.8
TAR625G0934 Trochodendron aralioides HOM05D005482 ORTHO05D006502 1.6e-28 129.4 100 65.0
Cfa006872 Carpinus fangiana HOM05D005482 ORTHO05D006502 2.0e-28 129.0 108 60.2
PGR102G1704 Punica granatum HOM05D005482 ORTHO05D006502 3.5e-28 128.3 98 65.3
Atru.chr3.678 Acer truncatum HOM05D005482 ORTHO05D006502 4.5e-28 127.9 95 64.2
Atru.chr3.724 Acer truncatum HOM05D005482 ORTHO05D006502 4.5e-28 127.9 95 64.2
CiPaw.01G172300 Carya illinoinensis HOM05D005482 ORTHO05D006502 4.5e-28 127.9 103 63.1
ClCG01G018310 Citrullus lanatus HOM05D005482 ORTHO05D006502 4.5e-28 127.9 111 62.2
Thhalv10003865m.g Eutrema salsugineum HOM05D005482 ORTHO05D006502 4.5e-28 127.9 105 62.9
Gohir.D12G079700 Gossypium hirsutum HOM05D005482 ORTHO05D006502 4.5e-28 127.9 103 63.1
CARHR279520 Cardamine hirsuta HOM05D005482 ORTHO05D006502 7.7e-28 127.1 107 63.6
Haze_03887 Corylus avellana HOM05D005482 ORTHO05D006502 1.0e-27 126.7 104 60.6
ECA246G0291 Erigeron canadensis HOM05D005482 ORTHO05D006502 1.0e-27 126.7 99 65.7
SGA_v2.0_scaffold108G30927 Striga asiatica HOM05D005482 ORTHO05D006502 1.0e-27 126.7 98 64.3
Medtr5g031750 Medicago truncatula HOM05D005482 ORTHO05D006502 1.3e-27 126.3 98 65.3
TWI77G0993 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 1.3e-27 126.3 98 64.3
Sp2g28640 Schrenkiella parvula HOM05D005482 ORTHO05D006502 1.7e-27 125.9 109 62.4
Aa31LG3G16620 Aethionema arabicum HOM05D005482 ORTHO05D006502 2.3e-27 125.6 109 58.7
Sc03g0000430 Simmondsia chinensis HOM05D005482 ORTHO05D006502 2.3e-27 125.6 98 62.2
AT5G65540 Arabidopsis thaliana HOM05D005482 ORTHO05D006502 2.9e-27 125.2 110 60.9
arahy.Tifrunner.gnm1.ann1.52LQAS Arachis hypogaea HOM05D005482 ORTHO05D006502 2.9e-27 125.2 106 62.3
arahy.Tifrunner.gnm1.ann1.HVQN9F Arachis hypogaea HOM05D005482 ORTHO05D006502 2.9e-27 125.2 106 62.3
Lsat_1_v5_gn_3_62981 Lactuca sativa HOM05D005482 ORTHO05D006502 2.9e-27 125.2 99 66.7
MD01G1040900 Malus domestica HOM05D005482 ORTHO05D006502 6.5e-27 124.0 102 64.7
CiPaw.08G141000 Carya illinoinensis HOM05D005482 ORTHO05D006502 8.6e-27 123.6 104 64.4
Sabra15G0071300 Salix brachista HOM05D005482 ORTHO05D006502 8.6e-27 123.6 98 60.2
BcaC01g02786 Brassica carinata HOM05D005482 ORTHO05D006502 1.5e-26 122.9 97 64.9
C03p60440 Brassica napus HOM05D005482 ORTHO05D006502 1.5e-26 122.9 97 64.9
BolC3t18305H Brassica oleracea HOM05D005482 ORTHO05D006502 1.5e-26 122.9 97 64.9
Eucgr.H02447 Eucalyptus grandis HOM05D005482 ORTHO05D006502 1.5e-26 122.9 85 69.4
Lj2g0006088 Lotus japonicus HOM05D005482 ORTHO05D006502 1.5e-26 122.9 98 61.2
Sabra07G0009200 Salix brachista HOM05D005482 ORTHO05D006502 1.5e-26 122.9 98 59.2
Prupe.6G203300 Prunus persica HOM05D005482 ORTHO05D006502 1.9e-26 122.5 108 61.1
MSTRG.23386 Avicennia marina HOM05D005482 ORTHO05D006502 2.5e-26 122.1 98 61.2
Carub.0008s2640 Capsella rubella HOM05D005482 ORTHO05D006502 3.3e-26 121.7 109 59.6
CsaV3_6G044940 Cucumis sativus L. HOM05D005482 ORTHO05D006502 4.2e-26 121.3 96 62.5
Duzib264G1263 Durio zibethinus HOM05D005482 ORTHO05D006502 5.5e-26 120.9 104 59.6
TPR.G7258 Trifolium pratense HOM05D005482 ORTHO05D006502 5.5e-26 120.9 99 61.6
AL8G43140 Arabidopsis lyrata HOM05D005482 ORTHO05D006502 7.2e-26 120.6 110 58.2
MELO3C007709.2 Cucumis melo HOM05D005482 ORTHO05D006502 7.2e-26 120.6 111 58.6
Lalb_Chr16g0381591 Lupinus albus HOM05D005482 ORTHO05D006502 9.5e-26 120.2 98 63.3
Nn1g05603 Nelumbo nucifera HOM05D005482 ORTHO05D006502 1.2e-25 119.8 73 75.3
unitig_736.g22591 Utricularia gibba HOM05D005482 ORTHO05D006502 1.6e-25 119.4 98 61.2
Potri.007G011800 Populus trichocarpa HOM05D005482 ORTHO05D006502 2.1e-25 119.0 98 58.2
MD15G1310400 Malus domestica HOM05D005482 ORTHO05D006502 2.8e-25 118.6 104 60.6
Oeu042113.2 Olea europaea HOM05D005482 ORTHO05D006502 4.7e-25 117.9 99 60.6
Psat3g169840 Pisum sativum HOM05D005482 ORTHO05D006502 4.7e-25 117.9 98 62.2
Cc07_g13970 Coffea canephora HOM05D005482 ORTHO05D006502 6.1e-25 117.5 111 55.0
Ah.03g139850 Amaranthus hybridus HOM05D005482 ORTHO05D006502 8.0e-25 117.1 108 54.6
THA.LOC104798625 Tarenaya hassleriana HOM05D005482 ORTHO05D006502 8.0e-25 117.1 103 57.3
Oeu017109.1 Olea europaea HOM05D005482 ORTHO05D006502 1.0e-24 116.7 99 59.6
Ca_25228_v3 Cicer arietinum L. HOM05D005482 ORTHO05D006502 1.8e-24 115.9 96 63.5
HPP92_017563 Vanilla planifolia HOM05D005482 ORTHO05D006502 1.8e-24 115.9 97 57.7
CiPaw.03G215800 Carya illinoinensis HOM05D005482 ORTHO05D006502 2.3e-24 115.5 75 70.7
AUR62017985 Chenopodium quinoa HOM05D005482 ORTHO05D006502 2.3e-24 115.5 103 59.2
VMungo1215G0139 Vigna mungo HOM05D005482 ORTHO05D006502 4.0e-24 114.8 98 59.2
Migut.H02285 Erythranthe guttata HOM05D005482 ORTHO05D006502 5.2e-24 114.4 98 58.2
EL10Ac6g15187 Beta vulgaris HOM05D005482 ORTHO05D006502 8.9e-24 113.6 101 59.4
Glyma.01G021600 Glycine max HOM05D005482 ORTHO05D006502 8.9e-24 113.6 98 57.1
Hma1.2p1_0369F.1_g137400 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 1.3e-22 109.8 102 54.9
Hma1.2p1_0369F.1_g137390 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 1.7e-22 109.4 100 56.0
Glyma.09G200000 Glycine max HOM05D005482 ORTHO05D006502 3.7e-22 108.2 99 56.6
Phvul.002G145800 Phaseolus vulgaris HOM05D005482 ORTHO05D006502 3.7e-22 108.2 98 56.1
RcHm_v2.0_Chr2g0110941 Rosa chinensis HOM05D005482 ORTHO05D006502 9.2e-21 103.6 106 51.9
A06p32390 Brassica napus HOM05D005482 ORTHO05D006502 7.8e-20 100.5 92 55.4
BraA06t26164Z Brassica rapa HOM05D005482 ORTHO05D006502 7.8e-20 100.5 92 55.4
Cpa.g.sc55.13 Carica papaya HOM05D005482 ORTHO05D006502 2.9e-19 98.6 75 62.7
Solyc01g056590.2 Solanum lycopersicum HOM05D005482 ORTHO05D006502 1.5e-18 96.3 80 58.8
Rhsim08G0017200 Rhododendron simsii HOM05D005482 ORTHO05D006502 7.3e-18 94.0 58 75.9
AagrBONN_evm.TU.Sc2ySwM_117.475 Anthoceros agrestis HOM05D005482 ORTHO05D006502 1.2e-15 86.7 82 54.9
Aqoxy5G01366 Aquilegia oxysepala HOM05D005482 ORTHO05D006502 1.2e-15 86.7 49 77.6
Zm00001eb061260 Zea mays HOM05D005482 ORTHO05D006502 9.8e-15 83.6 94 50.0
Os03g0802300 Oryza sativa ssp. japonica HOM05D005482 ORTHO05D006502 6.4e-14 80.9 82 51.2
Sabra15G0079600 Salix brachista HOM05D005482 ORTHO05D006502 1.4e-13 79.7 83 51.8
Pp3c20_16050 Physcomitrium patens HOM05D005482 ORTHO05D006502 2.0e-12 75.9 91 45.1
Mapoly0105s0033 Marchantia polymorpha HOM05D005482 ORTHO05D006502 6.0e-12 74.3 98 38.8
Solyc11g016980.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 2.3e-11 72.4 73 53.4
SMO203G0252 Selaginella moellendorffii HOM05D005482 ORTHO05D006502 4.3e-10 68.2 65 47.7
CSS0030560 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 8.9e-08 60.5 52 65.4
CiPaw.07G046300 Carya illinoinensis HOM05D005482 ORTHO05D006502 1.2e-07 60.1 56 58.9


User provided reference genes

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