Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G2010 Ceratophyllum demersum HOM05D005853 ORTHO05D007308 1.5e-44 183.0 127 100.0
CDE04G2734 Ceratophyllum demersum HOM05D005853 ORTHO05D007308 4.3e-36 154.8 98 86.7
MBI13_g01620_MAGBIO Magnolia biondii HOM05D005853 ORTHO05D007308 1.7e-16 89.7 57 78.9
Manes.03G020200 Manihot esculenta HOM05D005853 ORTHO05D007308 1.7e-16 89.7 45 84.4
Thecc.06G089900 Theobroma cacao HOM05D005853 ORTHO05D007308 1.7e-16 89.7 67 91.0
Eucgr.J02982 Eucalyptus grandis HOM05D005853 ORTHO05D007308 2.2e-16 89.4 94 66.0
Gohir.A08G241100 Gossypium hirsutum HOM05D005853 ORTHO05D007308 5.0e-16 88.2 88 53.4
TAR636G2025 Trochodendron aralioides HOM05D005853 ORTHO05D007308 5.0e-16 88.2 46 82.6
VMungo0331G1451 Vigna mungo HOM05D005853 ORTHO05D007308 5.0e-16 88.2 63 68.3
Ah.01g021430 Amaranthus hybridus HOM05D005853 ORTHO05D007308 6.5e-16 87.8 84 79.8
CSS0027693 Camellia sinensis var. sinensis HOM05D005853 ORTHO05D007308 6.5e-16 87.8 67 64.2
Duzib187G1793 Durio zibethinus HOM05D005853 ORTHO05D007308 6.5e-16 87.8 86 52.3
TAR624G1380 Trochodendron aralioides HOM05D005853 ORTHO05D007308 8.5e-16 87.4 62 75.8
Gohir.A05G022900 Gossypium hirsutum HOM05D005853 ORTHO05D007308 1.1e-15 87.0 86 55.8
PGR102G0312 Punica granatum HOM05D005853 ORTHO05D007308 1.1e-15 87.0 70 75.7
Thecc.09G110800 Theobroma cacao HOM05D005853 ORTHO05D007308 1.4e-15 86.7 115 60.9
ECA240G1876 Erigeron canadensis HOM05D005853 ORTHO05D007308 1.9e-15 86.3 58 65.5
Gohir.D06G060700 Gossypium hirsutum HOM05D005853 ORTHO05D007308 2.5e-15 85.9 43 83.7
Gorai.009G024500 Gossypium raimondii HOM05D005853 ORTHO05D007308 2.5e-15 85.9 88 53.4
Gorai.010G070700 Gossypium raimondii HOM05D005853 ORTHO05D007308 2.5e-15 85.9 43 83.7
Phvul.010G149900 Phaseolus vulgaris HOM05D005853 ORTHO05D007308 2.5e-15 85.9 63 65.1
Cpa.g.sc23.111 Carica papaya HOM05D005853 ORTHO05D007308 3.2e-15 85.5 57 71.9
Gohir.A05G022800 Gossypium hirsutum HOM05D005853 ORTHO05D007308 3.2e-15 85.5 117 55.6
Gohir.D05G024300 Gossypium hirsutum HOM05D005853 ORTHO05D007308 3.2e-15 85.5 113 58.4
HanXRQChr09g0239771 Helianthus annuus HOM05D005853 ORTHO05D007308 4.2e-15 85.1 80 53.8
Gorai.009G024400 Gossypium raimondii HOM05D005853 ORTHO05D007308 5.5e-15 84.7 116 57.8
Nn2g11754 Nelumbo nucifera HOM05D005853 ORTHO05D007308 5.5e-15 84.7 57 87.7
CSS0003127 Camellia sinensis var. sinensis HOM05D005853 ORTHO05D007308 7.2e-15 84.3 119 50.4
CSS0011641 Camellia sinensis var. sinensis HOM05D005853 ORTHO05D007308 7.2e-15 84.3 116 49.1
Glyma.08G205900 Glycine max HOM05D005853 ORTHO05D007308 7.2e-15 84.3 98 51.0
Gohir.D05G024400 Gossypium hirsutum HOM05D005853 ORTHO05D007308 7.2e-15 84.3 88 52.3
Gohir.A06G062400 Gossypium hirsutum HOM05D005853 ORTHO05D007308 9.4e-15 84.0 43 81.4
Manes.16G116400 Manihot esculenta HOM05D005853 ORTHO05D007308 9.4e-15 84.0 45 77.8
Nitab4.5_0001983g0030 Nicotiana tabacum HOM05D005853 ORTHO05D007308 9.4e-15 84.0 59 86.4
ATR0724G055 Amborella trichopoda HOM05D005853 ORTHO05D007308 1.2e-14 83.6 39 89.7
Lalb_Chr22g0351311 Lupinus albus HOM05D005853 ORTHO05D007308 1.2e-14 83.6 55 90.9
Prupe.7G230800 Prunus persica HOM05D005853 ORTHO05D007308 1.2e-14 83.6 43 79.1
RcHm_v2.0_Chr2g0090481 Rosa chinensis HOM05D005853 ORTHO05D007308 1.2e-14 83.6 43 79.1
MSTRG.22678 Avicennia marina HOM05D005853 ORTHO05D007308 1.6e-14 83.2 98 53.1
Glyma.07G005500 Glycine max HOM05D005853 ORTHO05D007308 1.6e-14 83.2 56 83.9
Peaxi162Scf00329g00432 Petunia axillaris HOM05D005853 ORTHO05D007308 1.6e-14 83.2 57 87.7
Lsat_1_v5_gn_7_40661 Lactuca sativa HOM05D005853 ORTHO05D007308 2.1e-14 82.8 39 87.2
GSVIVG01017090001 Vitis vinifera HOM05D005853 ORTHO05D007308 2.7e-14 82.4 50 94.0
Nitab4.5_0000129g0220 Nicotiana tabacum HOM05D005853 ORTHO05D007308 3.6e-14 82.0 44 84.1
THA.LOC104808760 Tarenaya hassleriana HOM05D005853 ORTHO05D007308 3.6e-14 82.0 43 81.4
Aa31LG8G14610 Aethionema arabicum HOM05D005853 ORTHO05D007308 4.6e-14 81.6 75 53.3
AL3G39990 Arabidopsis lyrata HOM05D005853 ORTHO05D007308 4.6e-14 81.6 44 77.3
Migut.I00880 Erythranthe guttata HOM05D005853 ORTHO05D007308 4.6e-14 81.6 57 64.9
Lj3g0010943 Lotus japonicus HOM05D005853 ORTHO05D007308 4.6e-14 81.6 49 77.6
Medtr4g012810 Medicago truncatula HOM05D005853 ORTHO05D007308 4.6e-14 81.6 47 74.5
BcaC01g02942 Brassica carinata HOM05D005853 ORTHO05D007308 6.1e-14 81.3 45 77.8
C03p58060 Brassica napus HOM05D005853 ORTHO05D007308 6.1e-14 81.3 45 77.8
BolC3t18080H Brassica oleracea HOM05D005853 ORTHO05D007308 6.1e-14 81.3 45 77.8
Cc04_g03260 Coffea canephora HOM05D005853 ORTHO05D007308 6.1e-14 81.3 85 55.3
Potri.018G079700 Populus trichocarpa HOM05D005853 ORTHO05D007308 6.1e-14 81.3 43 81.4
Sc12g0009330 Simmondsia chinensis HOM05D005853 ORTHO05D007308 6.1e-14 81.3 40 87.5
ClCG06G008520 Citrullus lanatus HOM05D005853 ORTHO05D007308 7.9e-14 80.9 55 81.8
PGR102G2925 Punica granatum HOM05D005853 ORTHO05D007308 7.9e-14 80.9 42 85.7
MSTRG.11072 Avicennia marina HOM05D005853 ORTHO05D007308 1.0e-13 80.5 39 89.7
BcaB08g34716 Brassica carinata HOM05D005853 ORTHO05D007308 1.0e-13 80.5 42 81.0
THA.LOC104804586 Tarenaya hassleriana HOM05D005853 ORTHO05D007308 1.0e-13 80.5 43 81.4
AT3G24506 Arabidopsis thaliana HOM05D005853 ORTHO05D007308 1.4e-13 80.1 42 81.0
A06p34130 Brassica napus HOM05D005853 ORTHO05D007308 1.4e-13 80.1 42 81.0
A07p03810 Brassica napus HOM05D005853 ORTHO05D007308 1.4e-13 80.1 45 73.3
BraA06t26346Z Brassica rapa HOM05D005853 ORTHO05D007308 1.4e-13 80.1 42 81.0
BraA07t28175Z Brassica rapa HOM05D005853 ORTHO05D007308 1.4e-13 80.1 45 73.3
Carub.0003s3118 Capsella rubella HOM05D005853 ORTHO05D007308 1.4e-13 80.1 42 81.0
FvH4_1g04830 Fragaria vesca HOM05D000050 ORTHO05D009634 1.4e-13 80.1 43 79.1
FAN19G0481 Fragaria x ananassa HOM05D000050 ORTHO05D009634 1.4e-13 80.1 43 79.1
FAN26G1381 Fragaria x ananassa HOM05D000050 ORTHO05D009634 1.4e-13 80.1 43 79.1
MD02G1047200 Malus domestica HOM05D005853 ORTHO05D007308 1.4e-13 80.1 91 50.5
AT2G17240 Arabidopsis thaliana HOM05D005853 ORTHO05D007308 1.8e-13 79.7 42 81.0
Carub.0003s2483 Capsella rubella HOM05D005853 ORTHO05D007308 1.8e-13 79.7 42 81.0
COL.COLO4_34918 Corchorus olitorius HOM05D005853 ORTHO05D007308 1.8e-13 79.7 89 44.9
Oeu033499.2 Olea europaea HOM05D005853 ORTHO05D007308 1.8e-13 79.7 50 82.0
Sp3g30580 Schrenkiella parvula HOM05D005853 ORTHO05D007308 1.8e-13 79.7 42 81.0
BcaB03g16471 Brassica carinata HOM05D005853 ORTHO05D007308 2.3e-13 79.3 41 80.5
CiPaw.04G164300 Carya illinoinensis HOM05D005853 ORTHO05D007308 2.3e-13 79.3 43 79.1
Haze_25712 Corylus avellana HOM05D005853 ORTHO05D007308 2.3e-13 79.3 42 78.6
Duzib150G0727 Durio zibethinus HOM05D005853 ORTHO05D007308 2.3e-13 79.3 41 80.5
QL02p085450 Quercus lobata HOM05D005853 ORTHO05D007308 2.3e-13 79.3 42 78.6
Dinv41601 Davidia involucrata HOM05D005853 ORTHO05D007308 3.0e-13 79.0 41 80.5
Prupe.3G069800 Prunus persica HOM05D005853 ORTHO05D007308 3.0e-13 79.0 57 66.7
AL3G50100 Arabidopsis lyrata HOM05D005853 ORTHO05D007308 3.9e-13 78.6 39 84.6
BcaC06g36242 Brassica carinata HOM05D005853 ORTHO05D007308 3.9e-13 78.6 79 50.6
C07p06090 Brassica napus HOM05D005853 ORTHO05D007308 3.9e-13 78.6 79 50.6
BolC7t41022H Brassica oleracea HOM05D005853 ORTHO05D007308 3.9e-13 78.6 79 50.6
Hma1.2p1_1455F.1_g284500 Hydrangea macrophylla HOM05D005853 ORTHO05D007308 3.9e-13 78.6 38 89.5
Zm00001eb247070 Zea mays HOM05D005853 ORTHO05D007308 3.9e-13 78.6 53 67.9
Ciclev10009718m.g Citrus clementina HOM05D005853 ORTHO05D007308 5.1e-13 78.2 107 49.5
Lsat_1_v5_gn_8_95440 Lactuca sativa HOM05D005853 ORTHO05D007308 5.1e-13 78.2 37 83.8
PSO210G6545 Papaver somniferum HOM05D005853 ORTHO05D007308 6.7e-13 77.8 39 82.1
Atru.chr7.1347 Acer truncatum HOM05D005853 ORTHO05D007308 8.8e-13 77.4 94 44.7
unitig_22.g5469 Utricularia gibba HOM05D005853 ORTHO05D007308 8.8e-13 77.4 71 57.7
Solyc04g008710.4 Solanum lycopersicum HOM05D005853 ORTHO05D007308 1.1e-12 77.0 45 77.8
Sopen04g003890 Solanum pennellii HOM05D005853 ORTHO05D007308 1.1e-12 77.0 45 77.8
arahy.Tifrunner.gnm1.ann1.84WEKL Arachis hypogaea HOM05D005853 ORTHO05D007308 1.5e-12 76.6 51 70.6
arahy.Tifrunner.gnm1.ann1.JCT5CV Arachis hypogaea HOM05D005853 ORTHO05D007308 1.5e-12 76.6 51 70.6
Os02g0614200 Oryza sativa ssp. japonica HOM05D005853 ORTHO05D007308 1.5e-12 76.6 38 81.6
PSO210G7285 Papaver somniferum HOM05D005853 ORTHO05D007308 1.5e-12 76.6 42 78.6
Zm00001eb184630 Zea mays HOM05D005853 ORTHO05D007308 1.5e-12 76.6 38 81.6
Pp3c1_36270 Physcomitrium patens HOM05D005853 ORTHO05D007308 2.5e-12 75.9 50 70.0
Pp3c2_3480 Physcomitrium patens HOM05D005853 ORTHO05D007308 2.5e-12 75.9 50 70.0
Sed0019935 Sechium edule HOM05D005853 ORTHO05D007308 2.5e-12 75.9 53 84.9
GSVIVG01015393001 Vitis vinifera HOM05D005853 ORTHO05D007308 2.5e-12 75.9 36 91.7
CiPaw.03G232300 Carya illinoinensis HOM05D005853 ORTHO05D007308 3.3e-12 75.5 36 88.9
DCAR_028712 Daucus carota HOM05D005181 ORTHO05D006086 5.7e-12 74.7 94 44.7
MD09G1211800 Malus domestica HOM05D005853 ORTHO05D007308 5.7e-12 74.7 40 82.5
Psat7g250480 Pisum sativum HOM05D005853 ORTHO05D007308 5.7e-12 74.7 41 78.0
SalBow2G1576 Salvia bowleyana HOM05D005853 ORTHO05D007308 5.7e-12 74.7 40 82.5
TWI34G0492 Tripterygium wilfordii HOM05D005853 ORTHO05D007308 5.7e-12 74.7 56 55.4
Aqoxy7G03791 Aquilegia oxysepala HOM05D005853 ORTHO05D007308 7.4e-12 74.3 55 61.8
CANSAT56G2684 Cannabis sativa HOM05D005853 ORTHO05D007308 7.4e-12 74.3 36 88.9
Mapoly0029s0025 Marchantia polymorpha HOM05D005853 ORTHO05D007308 9.7e-12 73.9 38 84.2
Thhalv10022893m.g Eutrema salsugineum HOM05D005853 ORTHO05D007308 1.7e-11 73.2 42 78.6
Sed0009205 Sechium edule HOM05D005853 ORTHO05D007308 1.7e-11 73.2 50 88.0
SMO347G0073 Selaginella moellendorffii HOM05D005853 ORTHO05D007308 2.2e-11 72.8 35 88.6
SGA_v2.0_scaffold5G02572 Striga asiatica HOM05D005853 ORTHO05D007308 3.7e-11 72.0 53 66.0
FvH4_6g31380 Fragaria vesca HOM05D005853 ORTHO05D007308 4.8e-11 71.6 38 78.9
RcHm_v2.0_Chr2g0138141 Rosa chinensis HOM05D005853 ORTHO05D007308 4.8e-11 71.6 38 78.9
PGSC0003DMG400025300 Solanum tuberosum HOM05D005853 ORTHO05D007308 4.8e-11 71.6 41 78.0
TPR.G17682 Trifolium pratense HOM05D005853 ORTHO05D007308 1.1e-10 70.5 44 65.9
MELO3C025336.2 Cucumis melo HOM05D005853 ORTHO05D007308 3.1e-10 68.9 72 62.5
CsaV3_1G030480 Cucumis sativus L. HOM05D005853 ORTHO05D007308 6.9e-10 67.8 78 47.4
CBR_g48216 Chara braunii HOM05D005853 ORTHO05D007308 9.1e-10 67.4 50 76.0
SEGI_01601 Sequoiadendron giganteum HOM05D005853 ORTHO05D007308 1.7e-08 63.2 43 58.1
Oeu024066.2 Olea europaea HOM05D005853 ORTHO05D007308 8.5e-08 60.8 111 38.7


User provided reference genes

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