Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 5.7e-86 320.9 159 100.0
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 3.1e-76 288.5 159 88.7
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 1.1e-36 157.1 145 54.5
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 1.4e-36 156.8 142 57.7
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 6.6e-34 147.9 151 55.0
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 6.6e-34 147.9 134 59.0
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 2.8e-32 142.5 148 54.1
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 3.6e-32 142.1 130 57.7
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 3.6e-32 142.1 149 50.3
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 1.4e-31 140.2 148 48.6
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 1.8e-31 139.8 143 55.2
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 5.2e-31 138.3 155 48.4
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 5.2e-31 138.3 157 49.0
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 8.9e-31 137.5 142 54.2
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 7.6e-30 134.4 140 54.3
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 7.6e-30 134.4 155 47.7
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 7.6e-30 134.4 147 48.3
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 6.4e-29 131.3 155 49.7
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 8.4e-29 131.0 159 48.4
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 8.4e-29 131.0 159 48.4
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.1e-28 130.6 151 51.0
CDE06G0073 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 1.4e-28 130.2 73 87.7
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 1.4e-28 130.2 132 52.3
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 2.4e-28 129.4 144 50.7
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 5.4e-28 128.3 159 43.4
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 5.4e-28 128.3 155 48.4
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 7.1e-28 127.9 155 48.4
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.2e-27 127.1 150 49.3
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 2.1e-27 126.3 160 46.9
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 2.1e-27 126.3 153 47.7
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 2.1e-27 126.3 132 50.8
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 2.1e-27 126.3 153 47.1
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 2.7e-27 125.9 155 47.7
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 2.7e-27 125.9 147 47.6
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 7.8e-27 124.4 173 43.4
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 1.0e-26 124.0 154 46.8
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 1.0e-26 124.0 156 46.8
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 3.9e-26 122.1 126 53.2
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 5.1e-26 121.7 157 45.2
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 1.5e-25 120.2 153 45.8
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 1.5e-25 120.2 153 47.1
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 1.5e-25 120.2 156 43.6
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.5e-25 120.2 173 42.2
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.9e-25 119.8 173 42.8
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 5.6e-25 118.2 169 42.0
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 9.6e-25 117.5 156 45.5
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 1.2e-24 117.1 145 46.9
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 1.2e-24 117.1 159 45.3
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 2.1e-24 116.3 139 42.4
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 3.6e-24 115.5 157 43.9
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 3.6e-24 115.5 152 44.7
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 3.6e-24 115.5 152 44.7
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 3.6e-24 115.5 152 44.7
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 8.1e-24 114.4 127 45.7
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.1e-23 114.0 117 52.1
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 1.1e-23 114.0 125 47.2
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 1.8e-23 113.2 162 42.6
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 4.0e-23 112.1 171 41.5
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 6.8e-23 111.3 149 44.3
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 8.9e-23 110.9 151 45.0
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 1.2e-22 110.5 159 43.4
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 1.5e-22 110.2 157 43.9
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 2.6e-22 109.4 146 45.2
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 3.4e-22 109.0 147 44.2
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 5.8e-22 108.2 146 43.8
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 7.6e-22 107.8 142 45.8
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 1.3e-21 107.1 123 43.9
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 4.9e-21 105.1 157 41.4
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 4.9e-21 105.1 136 44.1
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 1.1e-20 104.0 153 43.8
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 1.4e-20 103.6 115 48.7
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 1.9e-20 103.2 85 63.5
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 2.4e-20 102.8 127 46.5
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 5.4e-20 101.7 144 43.8
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 9.3e-20 100.9 157 44.6
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.2e-19 100.5 157 44.6
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 2.1e-19 99.8 152 42.1
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 2.1e-19 99.8 132 45.5
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 2.7e-19 99.4 127 43.3
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 7.8e-19 97.8 107 47.7
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 1.7e-18 96.7 129 40.3
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 2.3e-18 96.3 156 39.1
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 3.0e-18 95.9 149 43.6
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 3.9e-18 95.5 157 39.5
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 5.1e-18 95.1 126 44.4
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 1.1e-17 94.0 147 40.8
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 1.5e-17 93.6 148 40.5
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 7.3e-17 91.3 148 40.5
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 1.3e-16 90.5 148 40.5
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 2.8e-16 89.4 110 43.6
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 1.8e-15 86.7 113 45.1
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 6.9e-15 84.7 164 36.6
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 2.0e-14 83.2 106 45.3
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 2.6e-14 82.8 123 39.0
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 4.4e-14 82.0 121 40.5
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 1.3e-13 80.5 106 42.5
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 2.9e-13 79.3 142 40.1
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 1.4e-12 77.0 148 40.5
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 4.2e-12 75.5 142 35.2
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 9.3e-12 74.3 121 38.8
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 9.3e-12 74.3 194 30.9
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 2.7e-11 72.8 131 37.4
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 3.3e-09 65.9 131 34.4
C05p59720 Brassica napus HOM05D005992 ORTHO05D007476 9.6e-09 64.3 121 37.2
BolC5t34626H Brassica oleracea HOM05D005992 ORTHO05D007476 9.6e-09 64.3 121 37.2
BcaC05g29553 Brassica carinata HOM05D005992 ORTHO05D007476 1.6e-08 63.5 108 38.0
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 4.8e-08 62.0 97 37.1
AL3G18940 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 6.2e-08 61.6 58 46.6
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 6.2e-08 61.6 63 44.4
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 1.4e-07 60.5 82 42.7
Carub.0003s0715 Capsella rubella HOM05D005992 ORTHO05D007476 1.8e-07 60.1 86 40.7
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 1.2e-06 57.4 88 43.2
Aqoxy4G02934 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 2.0e-06 56.6 104 33.7
AT3G07580 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 9.9e-06 54.3 59 39.0
CARHR082280 Cardamine hirsuta HOM05D005992 ORTHO05D007476 9.9e-06 54.3 104 34.6


User provided reference genes

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