Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 3.2e-116 421.8 213 100.0
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 6.1e-75 284.6 172 83.1
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.8e-74 283.1 174 82.2
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 8.7e-74 280.8 175 82.9
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 8.7e-74 280.8 169 83.4
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 1.3e-72 276.9 170 82.4
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 3.7e-72 275.4 174 79.3
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.7e-72 275.4 167 82.6
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 6.3e-72 274.6 173 79.8
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 6.3e-72 274.6 173 79.8
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 8.2e-72 274.2 172 81.4
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 8.2e-72 274.2 167 82.6
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 8.2e-72 274.2 168 82.1
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 8.2e-72 274.2 176 81.8
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 1.4e-71 273.5 165 83.0
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.4e-71 273.5 173 79.2
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 1.8e-71 273.1 170 80.6
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 1.8e-71 273.1 168 81.0
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 2.4e-71 272.7 164 82.3
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 2.4e-71 272.7 171 81.9
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 3.1e-71 272.3 164 81.1
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 3.1e-71 272.3 175 79.4
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 3.1e-71 272.3 169 81.1
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 4.1e-71 271.9 171 81.9
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 4.1e-71 271.9 171 81.9
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 5.3e-71 271.6 168 79.8
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 5.3e-71 271.6 167 81.4
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 5.3e-71 271.6 167 81.4
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 6.9e-71 271.2 164 82.3
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 6.9e-71 271.2 173 79.2
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 9.0e-71 270.8 156 86.5
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 9.0e-71 270.8 174 78.2
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 1.2e-70 270.4 167 82.6
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.5e-70 270.0 156 85.9
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 2.0e-70 269.6 164 80.5
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 2.0e-70 269.6 157 84.7
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 2.6e-70 269.2 167 80.8
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 3.4e-70 268.9 169 81.1
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 5.9e-70 268.1 168 78.6
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 5.9e-70 268.1 174 78.7
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 5.9e-70 268.1 164 82.3
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 5.9e-70 268.1 152 86.8
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 7.7e-70 267.7 174 79.9
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 1.0e-69 267.3 175 77.1
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.3e-69 266.9 161 80.1
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 1.3e-69 266.9 179 75.4
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 1.7e-69 266.5 167 80.2
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 1.7e-69 266.5 180 74.4
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 2.2e-69 266.2 186 72.6
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 2.2e-69 266.2 168 79.8
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 2.2e-69 266.2 173 79.8
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.2e-69 266.2 172 79.7
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 2.9e-69 265.8 161 80.1
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 2.9e-69 265.8 152 86.2
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 5.0e-69 265.0 171 80.1
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 5.0e-69 265.0 167 80.8
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 8.5e-69 264.2 177 75.7
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 1.1e-68 263.8 172 77.9
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 1.4e-68 263.5 174 77.0
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 1.9e-68 263.1 165 81.2
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 1.9e-68 263.1 166 78.9
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 4.2e-68 261.9 170 77.6
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 4.2e-68 261.9 164 79.3
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 5.5e-68 261.5 174 76.4
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 7.2e-68 261.2 188 73.4
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 9.4e-68 260.8 174 77.6
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 1.2e-67 260.4 174 77.6
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 2.1e-67 259.6 167 78.4
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 4.6e-67 258.5 155 82.6
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 4.6e-67 258.5 184 73.9
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 4.6e-67 258.5 184 73.9
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 4.6e-67 258.5 169 77.5
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 6.1e-67 258.1 167 77.2
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.1e-67 258.1 188 72.9
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 6.1e-67 258.1 183 71.6
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 1.0e-66 257.3 167 76.6
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 1.0e-66 257.3 174 77.0
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 1.8e-66 256.5 175 75.4
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 1.8e-66 256.5 155 82.6
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 3.0e-66 255.8 175 74.3
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 3.0e-66 255.8 174 74.7
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 3.0e-66 255.8 174 74.7
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 5.1e-66 255.0 168 75.0
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 6.7e-66 254.6 174 74.7
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 6.7e-66 254.6 174 74.7
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 6.7e-66 254.6 174 74.7
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 1.1e-65 253.8 163 79.1
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 1.1e-65 253.8 175 74.9
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 1.5e-65 253.4 160 78.8
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 2.0e-65 253.1 171 76.0
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 4.3e-65 251.9 201 67.2
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 2.8e-64 249.2 176 71.0
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 3.7e-64 248.8 153 79.1
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 1.8e-63 246.5 157 79.0
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.2e-60 235.3 186 69.4
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 5.5e-60 235.0 136 85.3
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 2.6e-57 226.1 213 58.2
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 2.6e-57 226.1 175 67.4
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 3.7e-56 222.2 285 49.1
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 1.1e-52 210.7 123 85.4
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 1.1e-52 210.7 127 85.0
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 7.5e-49 198.0 114 87.7
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 8.2e-48 194.5 121 80.2
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 1.3e-45 187.2 134 72.4
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 5.5e-44 181.8 104 83.7
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 1.2e-43 180.6 115 77.4
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.6e-43 180.3 105 83.8
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 3.6e-43 179.1 116 75.9
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 6.1e-43 178.3 106 84.0
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 2.0e-41 173.3 104 80.8
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 2.6e-41 172.9 108 78.7
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 7.7e-30 134.8 149 46.3
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 5.0e-29 132.1 117 59.8
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 5.6e-28 128.6 148 49.3
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 5.6e-28 128.6 153 50.3
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 4.0e-26 122.5 138 47.8
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 2.7e-22 109.8 159 38.4
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 9.5e-20 101.3 220 33.2
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.2e-19 100.9 62 77.4
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 3.1e-18 96.3 162 40.7
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 1.2e-17 94.4 104 50.0
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 3.4e-09 66.2 89 43.8
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.9e-07 60.5 48 62.5
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 2.4e-07 60.1 142 31.0
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 5.4e-07 58.9 47 57.4
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 5.4e-07 58.9 34 76.5


User provided reference genes

Program Settings