Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 0.0e+00 1255.0 685 100.0
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 1.4e-303 1045.8 687 83.7
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 1.5e-87 328.2 789 34.2
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 2.1e-76 291.2 704 34.7
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 6.9e-72 276.2 801 35.7
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 6.1e-68 263.1 765 32.3
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 1.1e-64 252.3 583 34.6
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 2.4e-64 251.1 785 30.4
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 4.1e-64 250.4 725 31.4
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 3.8e-62 243.8 787 30.6
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 1.9e-61 241.5 772 31.1
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 9.4e-61 239.2 789 29.5
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 1.2e-60 238.8 782 30.1
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 6.1e-60 236.5 758 30.6
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 3.9e-59 233.8 735 30.2
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 8.8e-59 232.6 756 32.7
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 1.5e-58 231.9 762 30.1
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 2.6e-58 231.1 769 31.5
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 3.3e-58 230.7 707 31.1
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 1.3e-57 228.8 741 31.2
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 2.2e-57 228.0 711 33.1
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.8e-57 227.6 740 31.1
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 3.7e-57 227.3 740 31.1
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 1.4e-56 225.3 752 29.8
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 1.8e-56 224.9 783 28.7
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 4.1e-56 223.8 757 29.6
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 5.3e-56 223.4 779 29.7
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 9.1e-56 222.6 721 31.5
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 9.1e-56 222.6 733 31.5
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 3.5e-55 220.7 776 30.3
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 5.9e-55 219.9 721 31.2
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.9e-54 217.6 743 29.7
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 7.2e-53 213.0 736 31.4
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 1.6e-52 211.8 735 31.0
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 4.7e-52 210.3 764 29.6
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 4.7e-52 210.3 778 30.2
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.0e-51 209.1 738 30.5
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 1.0e-51 209.1 794 29.1
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 1.4e-51 208.8 738 31.8
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 9.7e-50 202.6 760 30.7
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.7e-49 201.8 766 29.5
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 2.2e-49 201.4 785 29.6
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 4.8e-49 200.3 788 31.5
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 4.8e-49 200.3 761 32.5
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 6.3e-49 199.9 747 30.1
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 8.2e-49 199.5 727 29.6
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.4e-48 198.7 638 30.1
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 1.4e-48 198.7 744 29.6
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.4e-48 198.0 710 29.0
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 3.5e-47 194.1 742 28.8
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 5.9e-47 193.4 757 29.6
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 7.7e-47 193.0 698 29.9
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 1.0e-46 192.6 735 28.0
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 1.3e-46 192.2 741 27.8
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 1.7e-46 191.8 701 29.8
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 2.9e-46 191.0 734 31.2
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 3.8e-46 190.7 693 29.9
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 3.8e-46 190.7 696 29.7
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 5.0e-46 190.3 698 30.1
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 5.0e-46 190.3 703 28.9
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 5.0e-46 190.3 766 29.8
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 2.5e-45 188.0 740 28.0
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 3.2e-45 187.6 650 28.8
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 7.2e-45 186.4 755 27.9
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 9.4e-45 186.0 776 28.9
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 9.4e-45 186.0 710 29.9
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 1.6e-44 185.3 723 28.6
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 2.1e-44 184.9 761 28.0
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 8.0e-44 183.0 702 29.1
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 8.0e-44 183.0 710 28.6
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 1.0e-43 182.6 713 28.9
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 1.4e-43 182.2 734 29.2
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 4.0e-43 180.6 738 28.2
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 5.2e-43 180.3 702 28.8
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 6.8e-43 179.9 718 27.9
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 3.4e-42 177.6 746 27.6
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 1.7e-41 175.3 586 30.4
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 2.8e-41 174.5 601 29.5
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 2.8e-41 174.5 763 28.4
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 4.8e-41 173.7 725 27.7
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 1.1e-40 172.6 731 28.6
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 5.4e-40 170.2 689 29.9
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 7.0e-40 169.9 722 28.0
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 7.0e-40 169.9 711 29.4
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 1.6e-39 168.7 754 26.0
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 2.0e-39 168.3 709 27.9
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 7.7e-39 166.4 506 33.8
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 7.7e-39 166.4 708 26.7
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 2.9e-38 164.5 493 32.7
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 3.8e-38 164.1 705 26.7
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 3.8e-38 164.1 733 26.5
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 5.0e-38 163.7 769 29.4
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 4.2e-37 160.6 733 26.9
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 7.2e-37 159.8 742 27.2
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 2.7e-36 157.9 752 27.4
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 3.6e-36 157.5 754 26.3
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 8.0e-36 156.4 633 28.1
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 1.0e-35 156.0 793 29.1
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 5.2e-35 153.7 751 25.8
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 6.3e-33 146.7 701 27.1
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 6.3e-33 146.7 766 26.2
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 4.1e-32 144.1 706 26.1
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 5.4e-32 143.7 760 26.1
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 5.4e-32 143.7 744 25.8
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 3.5e-31 141.0 722 26.6
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 3.5e-31 141.0 706 28.3
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 1.9e-29 135.2 685 26.7
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.1e-28 131.7 655 26.1
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.3e-27 128.3 723 25.7
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 1.2e-26 125.9 642 27.1
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 1.5e-26 125.6 729 24.6
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 2.6e-26 124.8 698 25.2
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 1.3e-25 122.5 690 24.5
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 2.9e-25 121.3 691 23.7
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 7.0e-24 116.7 743 23.8
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 4.6e-23 114.0 660 26.2
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 3.9e-22 110.9 701 25.1
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 1.5e-21 109.0 759 26.1
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 3.3e-21 107.8 695 23.9
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 7.3e-21 106.7 308 32.8
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 1.2e-20 105.9 683 24.7
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 2.1e-20 105.1 663 24.0
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 3.6e-20 104.4 703 25.2
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 4.0e-19 100.9 334 30.5
SEGI_17592 Sequoiadendron giganteum HOM05D003765 ORTHO05D004561 1.1e-16 92.8 187 28.9
unitig_22.g5225 Utricularia gibba HOM05D003765 ORTHO05D004561 4.1e-16 90.9 188 35.1
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 1.6e-15 89.0 722 24.2
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 3.5e-15 87.8 284 32.7
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 3.5e-15 87.8 170 36.5
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 4.6e-15 87.4 284 32.7
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 7.8e-15 86.7 338 30.5
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 7.8e-15 86.7 280 35.0
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 7.8e-15 86.7 315 29.2
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.7e-14 85.5 301 28.9
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 3.0e-14 84.7 327 29.1
HPP92_022139 Vanilla planifolia HOM05D003765 ORTHO05D004561 3.0e-14 84.7 244 29.5
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 5.0e-14 84.0 196 37.8
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 6.6e-14 83.6 308 27.9
HPP92_022144 Vanilla planifolia HOM05D003765 ORTHO05D004561 1.9e-13 82.0 244 29.1
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 2.5e-13 81.6 289 30.1
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 3.3e-13 81.3 327 28.1
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 5.6e-13 80.5 683 24.0
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 5.6e-13 80.5 327 28.7
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 7.3e-13 80.1 191 35.6
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 1.6e-12 79.0 327 28.4
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 4.7e-12 77.4 318 27.7
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 8.1e-12 76.6 325 28.6
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 8.1e-12 76.6 201 34.3
Zm00001eb418620 Zea mays HOM05D003765 ORTHO05D004561 8.1e-12 76.6 162 34.6
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 1.1e-11 76.3 320 25.9
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 8.9e-11 73.2 562 22.8
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 4.4e-10 70.9 321 26.5
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 4.4e-10 70.9 321 26.5
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 7.5e-10 70.1 465 25.2
SEGI_23141 Sequoiadendron giganteum HOM05D002769 ORTHO05D001913 3.7e-09 67.8 176 26.7
Os04g0106500 Oryza sativa ssp. japonica HOM05D003765 ORTHO05D004561 6.4e-09 67.0 159 34.0
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 8.3e-09 66.6 330 28.2
AagrBONN_evm.TU.Sc2ySwM_228.4044 Anthoceros agrestis HOM05D002515 ORTHO05D005796 1.1e-08 66.2 194 29.9
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 1.1e-08 66.2 238 30.3
VMungo0100G0003 Vigna mungo HOM05D003765 ORTHO05D004561 4.1e-08 64.3 103 41.7
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 7.1e-08 63.5 116 34.5
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 9.2e-08 63.2 205 28.3
SEGI_29651 Sequoiadendron giganteum HOM05D002769 ORTHO05D003160 2.1e-07 62.0 176 25.0
Mapoly0151s0019 Marchantia polymorpha HOM05D002515 ORTHO05D002722 3.5e-07 61.2 190 26.3
SEGI_41162 Sequoiadendron giganteum HOM05D001693 ORTHO05D001588 4.6e-07 60.8 187 27.8
VMungo0251G2630 Vigna mungo HOM05D003765 ORTHO05D004561 4.6e-07 60.8 103 39.8
BcaC04g23427 Brassica carinata HOM05D003765 ORTHO05D004561 7.8e-07 60.1 165 30.3
C09p08430 Brassica napus HOM05D003765 ORTHO05D004561 7.8e-07 60.1 165 30.3
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 6.6e-06 57.0 703 26.7


User provided reference genes

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