Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1839 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 2.6e-107 392.1 202 100.0
CDE04G2379 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 9.1e-89 330.5 189 91.0
MBI11_g04278_MAGBIO Magnolia biondii HOM05D007619 ORTHO05D009522 1.1e-60 237.3 188 67.0
PSO017G6303 Papaver somniferum HOM05D007619 ORTHO05D009522 1.2e-59 233.8 187 64.2
RcHm_v2.0_Chr3g0448201 Rosa chinensis HOM05D007619 ORTHO05D009522 3.2e-57 225.7 189 63.5
Nn7g37654 Nelumbo nucifera HOM05D007619 ORTHO05D009522 7.1e-57 224.6 200 60.0
TAR633G2353 Trochodendron aralioides HOM05D007619 ORTHO05D009522 2.1e-56 223.0 187 62.6
Aqoxy2G03954 Aquilegia oxysepala HOM05D007619 ORTHO05D009522 3.5e-56 222.2 192 62.5
Gorai.004G260400 Gossypium raimondii HOM05D007619 ORTHO05D009522 4.6e-56 221.9 188 63.3
Gohir.1Z049672 Gossypium hirsutum HOM05D007619 ORTHO05D009522 6.0e-56 221.5 188 63.3
Gohir.D08G244101 Gossypium hirsutum HOM05D007619 ORTHO05D009522 6.0e-56 221.5 188 63.3
GSVIVG01019143001 Vitis vinifera HOM05D007619 ORTHO05D009522 5.1e-55 218.4 187 62.0
Thecc.05G206200 Theobroma cacao HOM05D007619 ORTHO05D009522 5.6e-54 214.9 188 62.2
Manes.09G184300 Manihot esculenta HOM05D007619 ORTHO05D009522 9.5e-54 214.2 198 59.1
Psat4g220960 Pisum sativum HOM05D007619 ORTHO05D009522 2.8e-53 212.6 188 61.7
EL10Ac4g09950 Beta vulgaris HOM05D007619 ORTHO05D009522 1.1e-52 210.7 187 59.4
Atru.chr12.2107 Acer truncatum HOM05D007619 ORTHO05D009522 1.4e-52 210.3 187 62.6
Glyma.10G170300 Glycine max HOM05D007619 ORTHO05D009522 3.1e-52 209.1 189 61.9
Eucgr.C02023 Eucalyptus grandis HOM05D007619 ORTHO05D009522 4.0e-52 208.8 188 60.1
Ciclev10012185m.g Citrus clementina HOM05D007619 ORTHO05D009522 6.8e-52 208.0 187 61.0
Phvul.010G077712 Phaseolus vulgaris HOM05D007619 ORTHO05D009522 6.8e-52 208.0 189 60.8
MD04G1241800 Malus domestica HOM05D007619 ORTHO05D009522 8.9e-52 207.6 196 59.2
Hund27507 Selenicereus undatus HOM05D007619 ORTHO05D009522 1.2e-51 207.2 194 58.2
Hund21888 Selenicereus undatus HOM05D007619 ORTHO05D009522 1.5e-51 206.8 194 58.2
arahy.Tifrunner.gnm1.ann1.P2W93U Arachis hypogaea HOM05D007619 ORTHO05D009522 2.0e-51 206.5 189 61.9
Ca_09970_v3 Cicer arietinum L. HOM05D007619 ORTHO05D009522 2.6e-51 206.1 189 59.8
arahy.Tifrunner.gnm1.ann1.YK6SIT Arachis hypogaea HOM05D007619 ORTHO05D009522 4.4e-51 205.3 189 61.9
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 9.9e-51 204.1 180 60.0
ClCG11G010990 Citrullus lanatus HOM05D007619 ORTHO05D009522 2.2e-50 203.0 187 59.4
Glyma.20G219700 Glycine max HOM05D007619 ORTHO05D009522 2.2e-50 203.0 203 56.7
Cfa006282 Carpinus fangiana HOM05D007619 ORTHO05D009522 3.7e-50 202.2 182 59.3
Lalb_Chr21g0311391 Lupinus albus HOM05D007619 ORTHO05D009522 3.7e-50 202.2 187 60.4
TPR.G14653 Trifolium pratense HOM05D007619 ORTHO05D009522 6.4e-50 201.4 188 59.6
CsaV3_2G009500 Cucumis sativus L. HOM05D007619 ORTHO05D009522 8.3e-50 201.1 187 58.3
Hma1.2p1_0220F.1_g093010 Hydrangea macrophylla HOM05D007619 ORTHO05D009522 1.1e-49 200.7 180 59.4
Haze_04528 Corylus avellana HOM05D007619 ORTHO05D009522 7.1e-49 198.0 182 58.8
Sc09g0001560 Simmondsia chinensis HOM05D007619 ORTHO05D009522 7.1e-49 198.0 191 59.2
MELO3C008758.2 Cucumis melo HOM05D007619 ORTHO05D009522 9.2e-49 197.6 187 57.8
Peaxi162Scf00156g00417 Petunia axillaris HOM05D007619 ORTHO05D009522 1.6e-48 196.8 195 54.9
Lalb_Chr02g0149381 Lupinus albus HOM05D007619 ORTHO05D009522 2.7e-48 196.1 186 59.1
Solyc05g055830.3 Solanum lycopersicum HOM05D007619 ORTHO05D009522 4.6e-48 195.3 194 52.6
Sopen05g034230 Solanum pennellii HOM05D007619 ORTHO05D009522 4.6e-48 195.3 194 52.6
PGSC0003DMG400023471 Solanum tuberosum HOM05D007619 ORTHO05D009522 4.6e-48 195.3 195 53.3
HanXRQChr07g0190091 Helianthus annuus HOM05D007619 ORTHO05D009522 6.0e-48 194.9 187 56.1
HPP92_024640 Vanilla planifolia HOM05D001334 ORTHO05D001119 6.0e-48 194.9 162 59.9
AUR62000347 Chenopodium quinoa HOM05D000031 ORTHO05D009522 7.8e-48 194.5 183 56.3
Cc09_g03420 Coffea canephora HOM05D007619 ORTHO05D009522 1.3e-47 193.7 189 55.0
VMungo0720G2770 Vigna mungo HOM05D007619 ORTHO05D009522 1.7e-47 193.4 215 52.1
Gohir.A08G223800 Gossypium hirsutum HOM05D007619 ORTHO05D009522 5.1e-47 191.8 185 58.9
Medtr1g078380 Medicago truncatula HOM05D007619 ORTHO05D009522 6.6e-47 191.4 191 56.0
Zm00001eb394570 Zea mays HOM05D007619 ORTHO05D009522 1.1e-46 190.7 217 53.0
Ah.06g195590 Amaranthus hybridus HOM05D000031 ORTHO05D000030 3.3e-46 189.1 185 55.7
Lsat_1_v5_gn_2_17180 Lactuca sativa HOM05D007619 ORTHO05D009522 5.6e-46 188.3 182 56.0
FAN14G0392 Fragaria x ananassa HOM05D007619 ORTHO05D009522 7.3e-46 188.0 240 49.2
FAN09G3963 Fragaria x ananassa HOM05D007619 ORTHO05D009522 1.6e-45 186.8 256 46.1
Potri.013G087300 Populus trichocarpa HOM05D007619 ORTHO05D009522 3.6e-45 185.7 186 58.6
CAN.G694.14 Capsicum annuum HOM05D007619 ORTHO05D009522 6.2e-45 184.9 185 54.1
vmacro10399 Vaccinium macrocarpon HOM05D007619 ORTHO05D009522 1.8e-44 183.3 208 51.9
Os01g0100600 Oryza sativa ssp. japonica HOM05D007619 ORTHO05D009522 5.2e-44 181.8 221 51.6
TPR.G14659 Trifolium pratense HOM05D007619 ORTHO05D009522 5.2e-44 181.8 193 53.9
FAN05G3312 Fragaria x ananassa HOM05D007619 ORTHO05D009522 6.8e-44 181.4 269 44.2
Zm00001eb017060 Zea mays HOM05D007619 ORTHO05D009522 4.4e-43 178.7 223 49.8
ECA238G3388 Erigeron canadensis HOM05D000092 ORTHO05D000042 5.8e-43 178.3 188 52.7
SGA_v2.0_scaffold340G49291 Striga asiatica HOM05D007619 ORTHO05D009522 5.8e-43 178.3 186 53.2
Actinidia34778 Actinidia chinensis HOM05D007619 ORTHO05D009522 1.7e-42 176.8 159 56.6
PSO675G7165 Papaver somniferum HOM05D007619 ORTHO05D009522 4.9e-42 175.3 136 64.0
MSTRG.27407 Avicennia marina HOM05D007619 ORTHO05D009522 5.4e-41 171.8 186 52.7
Duzib128G0301 Durio zibethinus HOM05D007619 ORTHO05D009522 2.1e-40 169.9 151 60.3
CiPaw.08G116400 Carya illinoinensis HOM05D007619 ORTHO05D009522 1.0e-39 167.5 147 59.2
Migut.F01883 Erythranthe guttata HOM05D007619 ORTHO05D009522 2.5e-38 162.9 185 49.7
Lj5g0000048 Lotus japonicus HOM05D007619 ORTHO05D009522 4.3e-38 162.2 148 58.1
Sed0001247 Sechium edule HOM05D007619 ORTHO05D009522 1.6e-37 160.2 146 58.2
AUR62006691 Chenopodium quinoa HOM05D007619 ORTHO05D009522 3.6e-37 159.1 187 49.7
FAN02G4130 Fragaria x ananassa HOM05D007619 ORTHO05D009522 1.1e-36 157.5 193 50.3
Mapoly0093s0084 Marchantia polymorpha HOM05D007619 ORTHO05D009522 5.3e-36 155.2 198 49.5
Prupe.6G359200 Prunus persica HOM05D007619 ORTHO05D009522 5.3e-36 155.2 138 59.4
Pp3c8_1020 Physcomitrium patens HOM05D007619 ORTHO05D009522 2.6e-35 152.9 193 46.1
AagrBONN_evm.TU.Sc2ySwM_117.3969 Anthoceros agrestis HOM05D007619 ORTHO05D009522 1.2e-32 144.1 188 47.9
Nitab4.5_0009285g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 4.3e-30 135.6 186 45.7
Nitab4.5_0005183g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 1.1e-28 131.0 180 43.9
Oeu010149.1 Olea europaea HOM05D007619 ORTHO05D009522 1.4e-28 130.6 170 42.4
Rhsim09G0130800 Rhododendron simsii HOM05D003215 ORTHO05D003735 1.7e-26 123.6 258 37.2
SEGI_00786 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 3.8e-26 122.5 116 54.3
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 4.2e-25 119.0 95 62.1
Sabra18G0055400 Salix brachista HOM05D007619 ORTHO05D009522 3.5e-24 115.9 88 68.2
Oeu040489.1 Olea europaea HOM05D007619 ORTHO05D009522 1.3e-23 114.0 78 61.5
MD12G1258700 Malus domestica HOM05D007619 ORTHO05D009522 1.9e-22 110.2 83 59.0
SalBow6G3661 Salvia bowleyana HOM05D007619 ORTHO05D009522 3.3e-22 109.4 190 41.6
Dinv29118 Davidia involucrata HOM05D007619 ORTHO05D009522 1.6e-21 107.1 102 55.9
SMO230G0088 Selaginella moellendorffii HOM05D007619 ORTHO05D009522 1.4e-20 104.0 187 40.1
SHI13735 Sapria himalayana HOM05D007619 ORTHO05D009522 7.1e-17 91.7 168 38.1
Cpa.g.c37388 Carica papaya HOM05D007619 ORTHO05D009522 9.6e-14 81.3 45 75.6
Actinidia38907 Actinidia chinensis HOM05D003215 ORTHO05D003735 2.4e-12 76.6 127 44.1
ATR0609G094 Amborella trichopoda HOM05D007619 ORTHO05D009522 3.1e-12 76.3 66 65.2
MD12G1258600 Malus domestica HOM05D007619 ORTHO05D009522 5.0e-10 68.9 53 71.7
SEGI_37386 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 1.2e-08 64.3 98 44.9
Cpa.g.sc1371.1 Carica papaya HOM05D007619 ORTHO05D009522 6.1e-08 62.0 61 54.1
FvH4_6g00730 Fragaria vesca HOM05D007619 ORTHO05D009522 1.1e-06 57.8 41 75.6


User provided reference genes

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