Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1819 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 3.1e-78 295.0 146 100.0
PSO210G6830 Papaver somniferum HOM05D005482 ORTHO05D006502 4.7e-18 95.1 82 52.4
PSO170G0154 Papaver somniferum HOM05D005482 ORTHO05D006502 1.4e-17 93.6 82 51.2
CSS0030560 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 6.7e-17 91.3 136 36.8
Atru.chr3.678 Acer truncatum HOM05D005482 ORTHO05D006502 1.5e-16 90.1 89 50.6
Atru.chr3.724 Acer truncatum HOM05D005482 ORTHO05D006502 1.5e-16 90.1 89 50.6
Dinv13587 Davidia involucrata HOM05D005482 ORTHO05D006502 2.6e-16 89.4 130 40.8
Prupe.6G203300 Prunus persica HOM05D005482 ORTHO05D006502 3.3e-16 89.0 79 53.2
GSVIVG01002523001 Vitis vinifera HOM05D005482 ORTHO05D006502 1.3e-15 87.0 78 48.7
Gohir.A12G084900 Gossypium hirsutum HOM05D005482 ORTHO05D006502 1.7e-15 86.7 80 46.2
Cpa.g.sc55.13 Carica papaya HOM05D005482 ORTHO05D006502 2.8e-15 85.9 131 39.7
Dinv36943 Davidia involucrata HOM05D005482 ORTHO05D006502 3.7e-15 85.5 143 37.1
Nitab4.5_0007769g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 3.7e-15 85.5 69 55.1
CiPaw.07G046300 Carya illinoinensis HOM05D005482 ORTHO05D006502 4.8e-15 85.1 80 50.0
Gohir.D12G079700 Gossypium hirsutum HOM05D005482 ORTHO05D006502 4.8e-15 85.1 80 45.0
PGSC0003DMG400014586 Solanum tuberosum HOM05D005482 ORTHO05D006502 4.8e-15 85.1 149 34.9
TWI77G0993 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 4.8e-15 85.1 79 49.4
Nitab4.5_0000128g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 6.3e-15 84.7 69 55.1
Cc07_g13970 Coffea canephora HOM05D005482 ORTHO05D006502 8.2e-15 84.3 71 54.9
COL.COLO4_27370 Corchorus olitorius HOM05D005482 ORTHO05D006502 8.2e-15 84.3 89 44.9
Gorai.008G093000 Gossypium raimondii HOM05D005482 ORTHO05D006502 8.2e-15 84.3 80 45.0
MBI16_g31257_MAGBIO Magnolia biondii HOM05D005482 ORTHO05D006502 8.2e-15 84.3 124 40.3
Lj2A532G30 Lonicera japonica HOM05D005482 ORTHO05D006502 1.1e-14 84.0 85 45.9
Thecc.01G089100 Theobroma cacao HOM05D005482 ORTHO05D006502 1.1e-14 84.0 89 44.9
TWI74G1080 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 1.1e-14 84.0 77 49.4
CAN.G581.10 Capsicum annuum HOM05D005482 ORTHO05D006502 1.4e-14 83.6 90 44.4
Hma1.2p1_0369F.1_g137390 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 1.4e-14 83.6 65 52.3
Hma1.2p1_0369F.1_g137400 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 1.4e-14 83.6 65 52.3
CiPaw.08G141000 Carya illinoinensis HOM05D005482 ORTHO05D006502 2.4e-14 82.8 80 48.8
Sopen05g029760 Solanum pennellii HOM05D005482 ORTHO05D006502 3.1e-14 82.4 128 37.5
Aqoxy5G01366 Aquilegia oxysepala HOM05D005482 ORTHO05D006502 4.1e-14 82.0 90 46.7
Haze_03890 Corylus avellana HOM05D005482 ORTHO05D006502 4.1e-14 82.0 80 47.5
MD15G1310400 Malus domestica HOM05D005482 ORTHO05D006502 9.1e-14 80.9 79 49.4
QL06p035944 Quercus lobata HOM05D005482 ORTHO05D006502 9.1e-14 80.9 80 47.5
Solyc05g051370.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 9.1e-14 80.9 128 37.5
Cfa006872 Carpinus fangiana HOM05D005482 ORTHO05D006502 1.2e-13 80.5 131 37.4
TAR625G0934 Trochodendron aralioides HOM05D005482 ORTHO05D006502 1.2e-13 80.5 142 38.0
Nn1g05603 Nelumbo nucifera HOM05D005482 ORTHO05D006502 2.0e-13 79.7 80 47.5
Oeu042113.2 Olea europaea HOM05D005482 ORTHO05D006502 2.0e-13 79.7 67 52.2
SalBow3G1020 Salvia bowleyana HOM05D005482 ORTHO05D006502 2.0e-13 79.7 85 44.7
MD01G1040900 Malus domestica HOM05D005482 ORTHO05D006502 2.6e-13 79.3 79 48.1
DCAR_003442 Daucus carota HOM05D005482 ORTHO05D006502 4.5e-13 78.6 75 48.0
Peaxi162Scf01142g00001 Petunia axillaris HOM05D005482 ORTHO05D006502 5.9e-13 78.2 71 47.9
RcHm_v2.0_Chr2g0110941 Rosa chinensis HOM05D005482 ORTHO05D006502 5.9e-13 78.2 93 40.9
Duzib264G1263 Durio zibethinus HOM05D005482 ORTHO05D006502 7.7e-13 77.8 129 37.2
FAN26G3253 Fragaria x ananassa HOM05D005482 ORTHO05D006502 1.0e-12 77.4 79 45.6
FvH4_1g19490 Fragaria vesca HOM05D005482 ORTHO05D006502 2.2e-12 76.3 79 44.3
FAN19G3176 Fragaria x ananassa HOM05D005482 ORTHO05D006502 2.2e-12 76.3 79 44.3
Oeu017109.1 Olea europaea HOM05D005482 ORTHO05D006502 2.9e-12 75.9 67 49.3
Migut.H02285 Erythranthe guttata HOM05D005482 ORTHO05D006502 5.0e-12 75.1 84 42.9
RcHm_v2.0_Chr2g0110871 Rosa chinensis HOM05D005482 ORTHO05D006502 5.0e-12 75.1 93 41.9
FAN23G0007 Fragaria x ananassa HOM05D005482 ORTHO05D006502 6.5e-12 74.7 79 44.3
SGA_v2.0_scaffold108G30927 Striga asiatica HOM05D005482 ORTHO05D006502 6.5e-12 74.7 63 52.4
MSTRG.23386 Avicennia marina HOM05D005482 ORTHO05D006502 8.5e-12 74.3 63 52.4
CANSAT01G3178 Cannabis sativa HOM05D005482 ORTHO05D006502 1.1e-11 73.9 79 41.8
unitig_736.g22591 Utricularia gibba HOM05D005482 ORTHO05D006502 1.1e-11 73.9 72 47.2
PGR102G1704 Punica granatum HOM05D005482 ORTHO05D006502 1.5e-11 73.6 79 44.3
vmacro18548 Vaccinium macrocarpon HOM05D005482 ORTHO05D006502 1.5e-11 73.6 77 45.5
Sed0012268 Sechium edule HOM05D005482 ORTHO05D006502 1.9e-11 73.2 79 44.3
EL10Ac6g15187 Beta vulgaris HOM05D005482 ORTHO05D006502 2.5e-11 72.8 84 42.9
Rhsim08G0017200 Rhododendron simsii HOM05D005482 ORTHO05D006502 2.5e-11 72.8 79 43.0
FAN28G0477 Fragaria x ananassa HOM05D005482 ORTHO05D006502 3.2e-11 72.4 79 43.0
Lalb_Chr16g0381591 Lupinus albus HOM05D005482 ORTHO05D006502 3.2e-11 72.4 72 48.6
THA.LOC104798625 Tarenaya hassleriana HOM05D005482 ORTHO05D006502 4.2e-11 72.0 74 48.6
AUR62017985 Chenopodium quinoa HOM05D005482 ORTHO05D006502 5.5e-11 71.6 84 40.5
CARHR279520 Cardamine hirsuta HOM05D005482 ORTHO05D006502 2.7e-10 69.3 72 50.0
CsaV3_6G044940 Cucumis sativus L. HOM05D005482 ORTHO05D006502 2.7e-10 69.3 131 34.4
Hund16521 Selenicereus undatus HOM05D005482 ORTHO05D006502 4.7e-10 68.6 78 39.7
Ciclev10025202m.g Citrus clementina HOM05D005482 ORTHO05D006502 8.0e-10 67.8 111 39.6
C03p60440 Brassica napus HOM05D005482 ORTHO05D006502 1.4e-09 67.0 98 43.9
BolC3t18305H Brassica oleracea HOM05D005482 ORTHO05D006502 1.4e-09 67.0 98 43.9
Carub.0008s2640 Capsella rubella HOM05D005482 ORTHO05D006502 1.4e-09 67.0 72 48.6
Eucgr.H02447 Eucalyptus grandis HOM05D005482 ORTHO05D006502 1.4e-09 67.0 143 32.2
Sp2g28640 Schrenkiella parvula HOM05D005482 ORTHO05D006502 1.4e-09 67.0 72 48.6
CSS0020800 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 1.8e-09 66.6 136 30.9
AL8G43140 Arabidopsis lyrata HOM05D005482 ORTHO05D006502 2.3e-09 66.2 69 49.3
AT5G65540 Arabidopsis thaliana HOM05D005482 ORTHO05D006502 2.3e-09 66.2 69 49.3
BraA06t26164Z Brassica rapa HOM05D005482 ORTHO05D006502 5.2e-09 65.1 84 45.2
Sabra07G0009200 Salix brachista HOM05D005482 ORTHO05D006502 5.2e-09 65.1 57 52.6
ClCG01G018310 Citrullus lanatus HOM05D005482 ORTHO05D006502 6.7e-09 64.7 131 34.4
Lsat_1_v5_gn_3_62981 Lactuca sativa HOM05D005482 ORTHO05D006502 6.7e-09 64.7 75 41.3
MELO3C007709.2 Cucumis melo HOM05D005482 ORTHO05D006502 8.8e-09 64.3 131 34.4
Potri.007G011800 Populus trichocarpa HOM05D005482 ORTHO05D006502 8.8e-09 64.3 57 50.9
Thhalv10003865m.g Eutrema salsugineum HOM05D005482 ORTHO05D006502 1.5e-08 63.5 68 50.0
Sabra15G0071300 Salix brachista HOM05D005482 ORTHO05D006502 1.5e-08 63.5 57 50.9
HanXRQChr12g0368991 Helianthus annuus HOM05D005482 ORTHO05D006502 2.6e-08 62.8 68 38.2
Zm00001eb061260 Zea mays HOM05D005482 ORTHO05D006502 2.6e-08 62.8 79 44.3
A06p32390 Brassica napus HOM05D005482 ORTHO05D006502 4.4e-08 62.0 84 44.0
ECA246G0291 Erigeron canadensis HOM05D005482 ORTHO05D006502 5.7e-08 61.6 131 30.5
ATR0767G089 Amborella trichopoda HOM05D005482 ORTHO05D006502 1.3e-07 60.5 102 36.3
Aa31LG3G16620 Aethionema arabicum HOM05D005482 ORTHO05D006502 2.8e-07 59.3 140 32.1
HPP92_017563 Vanilla planifolia HOM05D005482 ORTHO05D006502 4.8e-07 58.5 119 33.6
Ah.03g139850 Amaranthus hybridus HOM05D005482 ORTHO05D006502 6.3e-07 58.2 81 35.8
Solyc11g016980.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 6.3e-07 58.2 103 35.9
Lj2g0006088 Lotus japonicus HOM05D005482 ORTHO05D006502 8.2e-07 57.8 66 43.9
Manes.12G125300 Manihot esculenta HOM05D005482 ORTHO05D006502 1.8e-06 56.6 85 37.6
arahy.Tifrunner.gnm1.ann1.52LQAS Arachis hypogaea HOM05D005482 ORTHO05D006502 4.1e-06 55.5 66 40.9
arahy.Tifrunner.gnm1.ann1.HVQN9F Arachis hypogaea HOM05D005482 ORTHO05D006502 4.1e-06 55.5 66 40.9
Os03g0802300 Oryza sativa ssp. japonica HOM05D005482 ORTHO05D006502 5.3e-06 55.1 103 33.0
Solyc02g062815.1 Solanum lycopersicum HOM05D005482 ORTHO05D006502 5.3e-06 55.1 76 39.5
TPR.G7258 Trifolium pratense HOM05D005482 ORTHO05D006502 9.1e-06 54.3 78 41.0


User provided reference genes

Program Settings