Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1776 Ceratophyllum demersum HOM05D054275 ORTHO05D000140 4.5e-135 484.6 243 100.0
CDE04G0042 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 3.3e-85 318.9 190 90.0
CDE04G3732 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 3.2e-56 222.6 188 64.4
CDE08G0001 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 3.2e-56 222.6 188 62.8
MBI02_g21882_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 2.5e-24 116.7 187 39.0
CDE04G3052 Ceratophyllum demersum HOM05D054275 ORTHO05D000140 2.8e-23 113.2 55 94.5
CiPaw.05G079800 Carya illinoinensis HOM05D000665 ORTHO05D000140 2.4e-19 100.1 191 35.1
Haze_02167 Corylus avellana HOM05D000665 ORTHO05D000140 3.5e-18 96.3 191 35.6
QL11p049281 Quercus lobata HOM05D000665 ORTHO05D000140 5.9e-18 95.5 189 33.9
Dinv04945 Davidia involucrata HOM05D000665 ORTHO05D000140 7.8e-18 95.1 187 34.8
Thecc.02G063400 Theobroma cacao HOM05D000665 ORTHO05D000140 5.0e-17 92.4 188 34.0
Dinv41959 Davidia involucrata HOM05D000665 ORTHO05D000140 6.6e-17 92.0 187 35.3
GSVIVG01024053001 Vitis vinifera HOM05D000665 ORTHO05D000140 6.6e-17 92.0 193 32.1
Ciclev10028943m.g Citrus clementina HOM05D000665 ORTHO05D000140 8.6e-17 91.7 189 31.7
Potri.004G172900 Populus trichocarpa HOM05D000665 ORTHO05D000140 1.1e-16 91.3 184 34.8
COL.COLO4_17303 Corchorus olitorius HOM05D000665 ORTHO05D000140 1.9e-16 90.5 185 33.5
Manes.11G096000 Manihot esculenta HOM05D000665 ORTHO05D000140 2.5e-16 90.1 193 32.6
Gohir.A01G166000 Gossypium hirsutum HOM05D000665 ORTHO05D000140 9.5e-16 88.2 185 33.5
CANSAT25G2307 Cannabis sativa HOM05D000665 ORTHO05D000140 1.2e-15 87.8 199 30.2
Gorai.002G195300 Gossypium raimondii HOM05D000665 ORTHO05D000140 2.1e-15 87.0 185 33.0
arahy.Tifrunner.gnm1.ann1.IV6FG9 Arachis hypogaea HOM05D000665 ORTHO05D000140 2.8e-15 86.7 183 34.4
Duzib132G1144 Durio zibethinus HOM05D000665 ORTHO05D000140 6.1e-15 85.5 188 32.4
Lj6C264T4 Lonicera japonica HOM05D000665 ORTHO05D000140 6.1e-15 85.5 180 35.0
Lj3g0017321 Lotus japonicus HOM05D000665 ORTHO05D000140 1.0e-14 84.7 182 33.0
arahy.Tifrunner.gnm1.ann1.PQJ7DP Arachis hypogaea HOM05D000665 ORTHO05D000140 1.4e-14 84.3 183 33.9
Cpa.g.sc37.168 Carica papaya HOM05D000665 ORTHO05D000140 4.0e-14 82.8 191 33.5
MBI19_g03252_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 4.0e-14 82.8 194 35.6
Sabra04G0115000 Salix brachista HOM05D000665 ORTHO05D000140 2.0e-13 80.5 178 31.5
Hma1.2p1_0026F.1_g016430 Hydrangea macrophylla HOM05D000665 ORTHO05D000140 2.6e-13 80.1 118 41.5
Nn6g33679 Nelumbo nucifera HOM05D000665 ORTHO05D000140 2.6e-13 80.1 190 32.6
Atru.chr5.3284 Acer truncatum HOM05D000665 ORTHO05D000140 4.4e-13 79.3 193 29.0
Cfa005219 Carpinus fangiana HOM05D000665 ORTHO05D000140 1.3e-12 77.8 131 37.4
ATR0776G040 Amborella trichopoda HOM05D000665 ORTHO05D000140 1.7e-12 77.4 181 29.3
Gohir.D01G157200 Gossypium hirsutum HOM05D000665 ORTHO05D000140 6.4e-12 75.5 191 30.9
MBI18_g11288_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 1.1e-11 74.7 187 30.5
ATR0815G057 Amborella trichopoda HOM05D034454 ORTHO05D031100 1.9e-11 73.9 190 32.6
MBI06_g06470_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D020847 2.4e-11 73.6 125 36.8
ATR0824G130 Amborella trichopoda HOM05D034454 ORTHO05D031100 3.2e-11 73.2 169 31.4
Hma1.2p1_0258F.1_g104230 Hydrangea macrophylla HOM05D000665 ORTHO05D000140 7.0e-11 72.0 120 36.7
ATR0585G101 Amborella trichopoda HOM05D000665 ORTHO05D000140 2.0e-10 70.5 184 27.7
COL.COLO4_14074 Corchorus olitorius HOM05D000555 ORTHO05D000646 2.7e-10 70.1 119 35.3
CDE04G2186 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 3.5e-10 69.7 209 28.2
ATR1089G093 Amborella trichopoda HOM05D000665 ORTHO05D000140 4.6e-10 69.3 197 32.5
CDE08G0696 Ceratophyllum demersum HOM05D000032 ORTHO05D007907 1.7e-09 67.4 194 25.8
ATR0693G289 Amborella trichopoda HOM05D000665 ORTHO05D000140 3.9e-09 66.2 189 28.6
ATR0776G057 Amborella trichopoda HOM05D000665 ORTHO05D000140 1.5e-08 64.3 184 25.5
CDE04G0179 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 1.5e-08 64.3 196 26.0
ATR0081G006 Amborella trichopoda HOM05D000665 ORTHO05D000140 1.9e-08 63.9 201 30.3
TWI09G0766 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 1.9e-08 63.9 188 27.7
CDE07G1043 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 2.5e-08 63.5 91 40.7
DCAR_020933 Daucus carota HOM05D000665 ORTHO05D000140 2.5e-08 63.5 56 50.0
Aqoxy6G00098 Aquilegia oxysepala HOM05D000665 ORTHO05D003147 1.2e-07 61.2 119 31.1
CDE02G1726 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 1.6e-07 60.8 185 27.0
CDE04G2523 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 1.6e-07 60.8 193 29.5
COL.COLO4_22459 Corchorus olitorius HOM05D000665 ORTHO05D003147 8.0e-07 58.5 185 24.9
Duzib147G1337 Durio zibethinus HOM05D000665 ORTHO05D003147 1.1e-06 58.2 185 25.4
Gohir.D11G180700 Gossypium hirsutum HOM05D000665 ORTHO05D003147 3.1e-06 56.6 184 29.3
QL06p051064 Quercus lobata HOM05D000665 ORTHO05D003147 3.1e-06 56.6 187 24.6
CSS0018305 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D003147 4.0e-06 56.2 188 26.1
PGR102G2926 Punica granatum HOM05D000665 ORTHO05D003147 6.8e-06 55.5 121 31.4
Cpa.g.sc6.284 Carica papaya HOM05D000665 ORTHO05D003147 8.9e-06 55.1 194 25.8
RcHm_v2.0_Chr6g0302651 Rosa chinensis HOM05D000665 ORTHO05D000140 8.9e-06 55.1 196 24.0


User provided reference genes

Program Settings