Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1701 Ceratophyllum demersum HOM05D003461 ORTHO05D004386 6.1e-310 1066.6 535 100.0
TAR383G0906 Trochodendron aralioides HOM05D003461 ORTHO05D004386 3.8e-227 791.6 522 73.8
Nn2g11834 Nelumbo nucifera HOM05D003461 ORTHO05D004386 3.2e-226 788.5 514 73.9
Aqoxy7G01835 Aquilegia oxysepala HOM05D003461 ORTHO05D004386 1.1e-221 773.5 522 72.6
CiPaw.07G217600 Carya illinoinensis HOM05D003461 ORTHO05D004386 6.5e-219 764.2 530 70.2
Ciclev10007226m.g Citrus clementina HOM05D003461 ORTHO05D004386 1.2e-217 760.0 521 70.6
Manes.13G069700 Manihot esculenta HOM05D003461 ORTHO05D004386 2.1e-217 759.2 518 70.5
Atru.chr7.2323 Acer truncatum HOM05D003461 ORTHO05D004386 8.0e-217 757.3 518 70.5
Thecc.09G143900 Theobroma cacao HOM05D003461 ORTHO05D004386 4.4e-215 751.5 521 69.9
RcHm_v2.0_Chr6g0312731 Rosa chinensis HOM05D003461 ORTHO05D004386 5.4e-213 744.6 521 69.1
Duzib168G0147 Durio zibethinus HOM05D003461 ORTHO05D004386 7.0e-213 744.2 522 69.0
Sc09g0008870 Simmondsia chinensis HOM05D003461 ORTHO05D004386 2.0e-212 742.7 523 68.3
Prupe.1G466400 Prunus persica HOM05D003461 ORTHO05D004386 2.7e-212 742.3 520 69.0
Haze_21625 Corylus avellana HOM05D003461 ORTHO05D004386 4.5e-212 741.5 521 70.4
PSO063G5065 Papaver somniferum HOM05D003461 ORTHO05D004386 4.5e-212 741.5 522 70.3
Phvul.001G055800 Phaseolus vulgaris HOM05D003461 ORTHO05D004386 1.3e-211 740.0 523 69.4
COL.COLO4_24068 Corchorus olitorius HOM05D003461 ORTHO05D004386 1.7e-211 739.6 516 69.6
FAN27G2808 Fragaria x ananassa HOM05D003461 ORTHO05D004386 2.3e-211 739.2 521 68.9
Lj7C712G4 Lonicera japonica HOM05D003461 ORTHO05D004386 2.3e-211 739.2 513 69.8
FvH4_2g30180 Fragaria vesca HOM05D003461 ORTHO05D004386 3.8e-211 738.4 521 68.9
PSO782G2185 Papaver somniferum HOM05D003461 ORTHO05D004386 3.8e-211 738.4 522 70.3
Dinv30215 Davidia involucrata HOM05D003461 ORTHO05D004386 5.0e-211 738.0 514 69.6
PGR044G2079 Punica granatum HOM05D003461 ORTHO05D004386 5.0e-211 738.0 523 67.9
FAN15G0070 Fragaria x ananassa HOM05D003461 ORTHO05D004386 6.6e-211 737.6 521 68.7
FAN20G1067 Fragaria x ananassa HOM05D003461 ORTHO05D004386 6.6e-211 737.6 521 68.7
Gorai.010G053900 Gossypium raimondii HOM05D003461 ORTHO05D004386 6.6e-211 737.6 522 69.2
vmacro05447 Vaccinium macrocarpon HOM05D003461 ORTHO05D004386 8.6e-211 737.3 511 69.3
Gohir.D05G011400 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.1e-210 736.9 521 68.1
GSVIVG01035727001 Vitis vinifera HOM05D003461 ORTHO05D004386 1.5e-210 736.5 522 69.0
Gohir.D06G048050 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.9e-210 736.1 522 69.0
Gorai.009G011800 Gossypium raimondii HOM05D003461 ORTHO05D004386 1.9e-210 736.1 521 68.1
Cpa.g.sc91.7 Carica papaya HOM05D003461 ORTHO05D004386 2.5e-210 735.7 518 69.3
MD08G1135800 Malus domestica HOM05D003461 ORTHO05D004386 2.5e-210 735.7 516 68.4
Ah.12g063310 Amaranthus hybridus HOM05D003461 ORTHO05D004386 4.3e-210 734.9 527 68.9
Gohir.A06G048100 Gossypium hirsutum HOM05D003461 ORTHO05D004386 4.3e-210 734.9 522 69.0
Gohir.A05G010700 Gossypium hirsutum HOM05D003461 ORTHO05D004386 7.3e-210 734.2 521 68.5
Lj5g0000879 Lotus japonicus HOM05D003461 ORTHO05D004386 7.3e-210 734.2 523 69.4
VMungo0647G2469 Vigna mungo HOM05D003461 ORTHO05D004386 9.5e-210 733.8 508 69.7
AUR62032384 Chenopodium quinoa HOM05D003461 ORTHO05D004386 2.8e-209 732.3 517 68.9
Lalb_Chr11g0063991 Lupinus albus HOM05D003461 ORTHO05D004386 2.8e-209 732.3 522 68.0
AUR62024833 Chenopodium quinoa HOM05D003461 ORTHO05D004386 3.6e-209 731.9 517 68.9
Glyma.14G129400 Glycine max HOM05D003461 ORTHO05D004386 3.6e-209 731.9 522 67.8
Dinv35880 Davidia involucrata HOM05D003461 ORTHO05D004386 6.1e-209 731.1 512 69.7
CANSAT01G0438 Cannabis sativa HOM05D003461 ORTHO05D004386 1.4e-208 729.9 517 68.9
Potri.018G034700 Populus trichocarpa HOM05D003461 ORTHO05D004386 1.4e-208 729.9 518 68.7
TWI34G1710 Tripterygium wilfordii HOM05D003461 ORTHO05D004386 1.4e-208 729.9 521 68.7
Glyma.17G204000 Glycine max HOM05D003461 ORTHO05D004386 3.0e-208 728.8 522 67.4
Hund28667 Selenicereus undatus HOM05D003461 ORTHO05D004386 1.2e-207 726.9 522 67.0
Hund28681 Selenicereus undatus HOM05D003461 ORTHO05D004386 1.2e-207 726.9 522 67.0
CSS0003133 Camellia sinensis var. sinensis HOM05D003461 ORTHO05D004386 5.7e-207 724.5 522 67.0
Sabra18G0035400 Salix brachista HOM05D003461 ORTHO05D004386 5.7e-207 724.5 518 67.8
DCAR_006261 Daucus carota HOM05D003461 ORTHO05D004386 9.8e-207 723.8 513 68.4
Duzib150G1527 Durio zibethinus HOM05D003461 ORTHO05D004386 2.2e-206 722.6 521 67.2
AL4G17260 Arabidopsis lyrata HOM05D003461 ORTHO05D004386 2.9e-206 722.2 522 67.8
Medtr1g010300 Medicago truncatula HOM05D003461 ORTHO05D004386 2.9e-206 722.2 522 68.0
BcaB06g28084 Brassica carinata HOM05D003461 ORTHO05D004386 6.4e-206 721.1 522 67.2
arahy.Tifrunner.gnm1.ann1.3VS957 Arachis hypogaea HOM05D003461 ORTHO05D004386 1.4e-205 719.9 519 68.2
THA.LOC104819890 Tarenaya hassleriana HOM05D003461 ORTHO05D004386 1.4e-205 719.9 518 69.5
Eucgr.C02859 Eucalyptus grandis HOM05D003461 ORTHO05D004386 3.2e-205 718.8 511 67.9
Oeu019417.3 Olea europaea HOM05D003461 ORTHO05D004386 3.2e-205 718.8 522 67.0
CARHR115590 Cardamine hirsuta HOM05D003461 ORTHO05D004386 5.4e-205 718.0 522 67.6
Cc08_g08280 Coffea canephora HOM05D003461 ORTHO05D004386 7.0e-205 717.6 522 67.8
TPR.G20094 Trifolium pratense HOM05D003461 ORTHO05D004386 1.2e-204 716.8 513 67.6
Solyc08g067860.2 Solanum lycopersicum HOM05D003461 ORTHO05D004386 1.6e-204 716.5 524 66.2
Sopen08g021790 Solanum pennellii HOM05D003461 ORTHO05D004386 1.6e-204 716.5 524 66.2
Thhalv10000008m.g Eutrema salsugineum HOM05D003461 ORTHO05D004386 2.0e-204 716.1 522 66.7
BcaC02g08333 Brassica carinata HOM05D003461 ORTHO05D004386 3.5e-204 715.3 522 66.9
MELO3C003666.2 Cucumis melo HOM05D003461 ORTHO05D004386 4.6e-204 714.9 507 69.8
Sp4g05280 Schrenkiella parvula HOM05D003461 ORTHO05D004386 4.6e-204 714.9 522 67.2
CAN.G21.14 Capsicum annuum HOM05D003461 ORTHO05D004386 5.9e-204 714.5 524 66.2
A04p19870 Brassica napus HOM05D003461 ORTHO05D004386 3.0e-203 712.2 523 66.9
BraA04t17575Z Brassica rapa HOM05D003461 ORTHO05D004386 6.6e-203 711.1 523 66.7
CsaV3_3G046700 Cucumis sativus L. HOM05D003461 ORTHO05D004386 1.1e-202 710.3 531 66.9
Sed0017351 Sechium edule HOM05D003461 ORTHO05D004386 1.1e-202 710.3 490 70.6
C04p55600 Brassica napus HOM05D003461 ORTHO05D004386 3.3e-202 708.8 518 67.2
BolC4t27084H Brassica oleracea HOM05D003461 ORTHO05D004386 3.3e-202 708.8 518 67.2
Nitab4.5_0009600g0030 Nicotiana tabacum HOM05D003461 ORTHO05D004386 3.3e-202 708.8 524 66.6
Rhsim07G0154200 Rhododendron simsii HOM05D003461 ORTHO05D004386 3.3e-202 708.8 575 61.9
ATR0037G074 Amborella trichopoda HOM05D003461 ORTHO05D004386 1.2e-201 706.8 524 64.9
AT2G25660 Arabidopsis thaliana HOM05D003461 ORTHO05D004386 1.6e-201 706.4 522 66.9
FAN24G1347 Fragaria x ananassa HOM05D003461 ORTHO05D004386 2.1e-201 706.1 499 68.9
Carub.0004s0545 Capsella rubella HOM05D003461 ORTHO05D004386 1.0e-200 703.7 522 66.5
Psat6g031040 Pisum sativum HOM05D003461 ORTHO05D004386 1.4e-200 703.4 515 68.0
ECA240G1832 Erigeron canadensis HOM05D003461 ORTHO05D004386 5.2e-200 701.4 511 68.1
EL10Ac2g02534 Beta vulgaris HOM05D003461 ORTHO05D004386 6.8e-200 701.0 522 66.5
Lsat_1_v5_gn_5_45581 Lactuca sativa HOM05D003461 ORTHO05D004386 1.3e-198 696.8 515 68.0
arahy.Tifrunner.gnm1.ann1.4R6GA4 Arachis hypogaea HOM05D003461 ORTHO05D004386 1.7e-198 696.4 505 67.9
MD15G1115200 Malus domestica HOM05D003461 ORTHO05D004386 2.2e-198 696.0 516 65.3
Actinidia15711 Actinidia chinensis HOM05D003461 ORTHO05D004386 2.9e-198 695.7 523 65.6
Aa31sc76G80 Aethionema arabicum HOM05D003461 ORTHO05D004386 3.2e-197 692.2 522 64.9
Migut.A00272 Erythranthe guttata HOM05D003461 ORTHO05D004386 3.2e-197 692.2 517 64.4
SGA_v2.0_scaffold27G11498 Striga asiatica HOM05D003461 ORTHO05D004386 1.2e-196 690.3 522 64.8
HPP92_015152 Vanilla planifolia HOM05D003461 ORTHO05D004386 1.6e-196 689.9 522 64.8
HanXRQChr08g0221141 Helianthus annuus HOM05D003461 ORTHO05D004386 6.0e-196 688.0 545 64.6
unitig_747.g21880 Utricularia gibba HOM05D003461 ORTHO05D004386 1.1e-194 683.7 513 64.3
ClCG05G017220 Citrullus lanatus HOM05D003461 ORTHO05D004386 1.5e-194 683.3 486 68.9
Glyma.04G072400 Glycine max HOM05D003461 ORTHO05D004386 5.2e-192 674.9 521 64.5
Glyma.06G073700 Glycine max HOM05D003461 ORTHO05D004386 1.5e-191 673.3 522 63.2
SalBow4G0560 Salvia bowleyana HOM05D003461 ORTHO05D004386 2.0e-191 672.9 540 61.5
Lj1g0021913 Lotus japonicus HOM05D003461 ORTHO05D004386 4.3e-186 655.2 521 63.0
Zm00001eb122270 Zea mays HOM05D003461 ORTHO05D004386 7.3e-186 654.4 509 62.3
VMungo1309G1485 Vigna mungo HOM05D003461 ORTHO05D004386 1.1e-184 650.6 525 61.7
Os01g0179400 Oryza sativa ssp. japonica HOM05D003461 ORTHO05D004386 4.0e-184 648.7 509 61.1
Phvul.009G098100 Phaseolus vulgaris HOM05D003461 ORTHO05D004386 8.9e-184 647.5 525 61.3
Nitab4.5_0000125g0130 Nicotiana tabacum HOM05D003461 ORTHO05D004386 4.4e-183 645.2 478 66.1
Medtr3g108080 Medicago truncatula HOM05D003461 ORTHO05D004386 1.1e-178 630.6 529 59.7
Psat5g027760 Pisum sativum HOM05D003461 ORTHO05D004386 1.2e-177 627.1 516 61.6
SEGI_10354 Sequoiadendron giganteum HOM05D003461 ORTHO05D004386 2.0e-175 619.8 487 60.4
Peaxi162Scf00105g01316 Petunia axillaris HOM05D003461 ORTHO05D004386 2.9e-174 615.9 434 68.4
TPR.G34693 Trifolium pratense HOM05D003461 ORTHO05D004386 1.9e-170 603.2 569 55.7
Ca_15696_v3 Cicer arietinum L. HOM05D003461 ORTHO05D004386 4.5e-151 538.9 418 63.2
AagrBONN_evm.TU.Sc2ySwM_228.5632 Anthoceros agrestis HOM05D003461 ORTHO05D004386 7.2e-141 505.0 516 51.6
Mapoly0004s0170 Marchantia polymorpha HOM05D003461 ORTHO05D004386 3.7e-137 492.7 512 51.2
Pp3c4_150 Physcomitrium patens HOM05D003461 ORTHO05D004386 7.9e-132 474.9 529 47.6
SMO347G0057 Selaginella moellendorffii HOM05D003461 ORTHO05D004386 5.2e-123 445.7 487 46.8
CBR_g20101 Chara braunii HOM05D003461 ORTHO05D004386 1.7e-110 404.1 501 44.3
AL4G17190 Arabidopsis lyrata HOM05D003461 ORTHO05D004386 1.1e-101 374.8 276 66.3
Actinidia14639 Actinidia chinensis HOM05D003461 ORTHO05D004386 1.4e-96 357.8 263 64.6
Actinidia14640 Actinidia chinensis HOM05D003461 ORTHO05D004386 6.4e-89 332.4 213 75.1
Gohir.D06G048151 Gossypium hirsutum HOM05D003461 ORTHO05D004386 2.2e-73 280.8 199 69.3
MCO11G459 Micromonas commoda HOM05D003461 ORTHO05D004386 6.2e-44 183.0 517 26.9
HPP92_015177 Vanilla planifolia HOM05D003461 ORTHO05D004386 9.3e-32 142.5 131 54.2
Aqoxy7G02104 Aquilegia oxysepala HOM05D003461 ORTHO05D005897 1.9e-29 134.8 105 65.7
VMungo1127G1644 Vigna mungo HOM05D003461 ORTHO05D004386 1.3e-20 105.5 64 73.4
Cre05.g243150 Chlamydomonas reinhardtii HOM05D003461 ORTHO05D004386 5.9e-10 70.1 96 35.4
MBI14_g27819_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D022889 9.4e-08 62.8 52 57.7
MBI19_g30558_MAGBIO Magnolia biondii HOM05D003461 ORTHO05D022889 1.8e-06 58.5 44 63.6


User provided reference genes

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