Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 5.9e-48 193.7 90 100.0
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.6e-40 169.1 90 91.1
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 4.7e-29 131.0 84 71.4
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 1.5e-27 125.9 82 69.5
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 1.5e-27 125.9 83 65.1
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 4.4e-27 124.4 85 63.5
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 9.9e-27 123.2 81 65.4
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 9.9e-27 123.2 84 67.9
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 1.3e-26 122.9 78 71.8
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 1.3e-26 122.9 85 65.9
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 2.2e-26 122.1 84 67.9
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 2.2e-26 122.1 84 67.9
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 2.9e-26 121.7 91 61.5
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 3.7e-26 121.3 83 66.3
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 4.9e-26 120.9 78 70.5
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 1.1e-25 119.8 88 63.6
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 1.4e-25 119.4 78 66.7
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 4.1e-25 117.9 85 65.9
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 4.1e-25 117.9 82 62.2
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 7.1e-25 117.1 71 69.0
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 7.1e-25 117.1 85 60.0
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 9.2e-25 116.7 82 65.9
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 1.6e-24 115.9 71 69.0
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 1.6e-24 115.9 82 64.6
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 2.7e-24 115.2 78 61.5
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 2.7e-24 115.2 78 62.8
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 2.7e-24 115.2 78 62.8
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 2.7e-24 115.2 71 67.6
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 2.7e-24 115.2 68 73.5
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 4.6e-24 114.4 74 70.3
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 1.0e-23 113.2 79 63.3
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 1.0e-23 113.2 62 77.4
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 1.0e-23 113.2 69 72.5
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 1.0e-23 113.2 69 72.5
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 1.3e-23 112.8 66 75.8
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 1.3e-23 112.8 75 66.7
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 1.3e-23 112.8 91 60.4
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 2.3e-23 112.1 79 62.0
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 3.0e-23 111.7 85 57.6
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 3.0e-23 111.7 66 72.7
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 3.0e-23 111.7 72 73.6
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 5.1e-23 110.9 88 56.8
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 6.6e-23 110.5 80 62.5
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 6.6e-23 110.5 64 71.9
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 8.6e-23 110.2 80 61.2
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 8.6e-23 110.2 70 68.6
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 8.6e-23 110.2 59 78.0
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 1.5e-22 109.4 75 64.0
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 1.5e-22 109.4 75 64.0
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 1.5e-22 109.4 78 59.0
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.9e-22 109.0 62 75.8
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 2.5e-22 108.6 60 73.3
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 3.3e-22 108.2 67 67.2
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 3.3e-22 108.2 87 58.6
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 3.3e-22 108.2 80 61.2
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 3.3e-22 108.2 116 49.1
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 3.3e-22 108.2 71 63.4
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 1.6e-21 105.9 61 73.8
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 2.1e-21 105.5 79 57.0
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 2.8e-21 105.1 72 66.7
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 2.8e-21 105.1 66 65.2
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 2.8e-21 105.1 93 51.6
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 3.6e-21 104.8 86 58.1
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 3.6e-21 104.8 71 64.8
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 4.7e-21 104.4 87 57.5
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 4.7e-21 104.4 85 56.5
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 4.7e-21 104.4 85 56.5
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 6.2e-21 104.0 86 58.1
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 6.2e-21 104.0 86 57.0
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 6.2e-21 104.0 86 58.1
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 6.2e-21 104.0 87 57.5
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 8.1e-21 103.6 86 58.1
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 8.1e-21 103.6 68 66.2
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.4e-20 102.8 62 71.0
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 1.8e-20 102.4 66 66.7
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 1.8e-20 102.4 71 64.8
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 2.4e-20 102.1 92 54.3
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 4.0e-20 101.3 86 55.8
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 6.8e-20 100.5 81 56.8
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 8.9e-20 100.1 69 66.7
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 8.9e-20 100.1 75 60.0
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 1.5e-19 99.4 88 54.5
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 1.5e-19 99.4 63 65.1
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 2.0e-19 99.0 71 64.8
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 2.0e-19 99.0 71 64.8
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 9.9e-19 96.7 73 61.6
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 9.9e-19 96.7 73 61.6
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 2.2e-18 95.5 73 61.6
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 2.2e-18 95.5 73 60.3
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 2.2e-18 95.5 73 61.6
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 2.2e-18 95.5 51 76.5
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 6.4e-18 94.0 101 47.5
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 1.1e-17 93.2 73 60.3
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 1.9e-17 92.4 79 49.4
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 9.2e-17 90.1 45 82.2
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 2.1e-16 89.0 59 67.8
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 2.1e-16 89.0 59 67.8
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 3.5e-16 88.2 75 52.0
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 1.7e-15 85.9 55 65.5
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.7e-15 85.9 85 51.8
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 3.0e-15 85.1 97 47.4
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 5.6e-14 80.9 56 62.5
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 2.1e-13 79.0 62 54.8
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 6.9e-12 73.9 43 74.4
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 9.9e-11 70.1 42 73.8
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 5.4e-09 64.3 60 53.3
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 9.3e-09 63.5 41 61.0
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 1.5e-06 56.2 28 82.1
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 3.3e-06 55.1 28 82.1


User provided reference genes

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