Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1687 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 1.6e-74 282.7 149 100.0
CDE04G1090 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 2.2e-63 245.7 144 89.6
TAR625G1145 Trochodendron aralioides HOM05D005382 ORTHO05D006795 1.8e-54 216.1 141 80.9
Nn8g40079 Nelumbo nucifera HOM05D005382 ORTHO05D006795 4.1e-54 214.9 141 81.6
Cc04_g05300 Coffea canephora HOM05D005382 ORTHO05D006795 5.4e-54 214.5 145 75.9
Gorai.007G085500 Gossypium raimondii HOM05D005382 ORTHO05D006795 1.0e-52 210.3 130 83.8
Prupe.3G103600 Prunus persica HOM05D005382 ORTHO05D006795 1.0e-52 210.3 137 80.3
Nn8g40087 Nelumbo nucifera HOM05D005382 ORTHO05D006795 1.7e-52 209.5 141 78.7
Gohir.A11G075200 Gossypium hirsutum HOM05D005382 ORTHO05D006795 3.0e-52 208.8 130 83.1
Thecc.06G046600 Theobroma cacao HOM05D005382 ORTHO05D006795 3.9e-52 208.4 153 74.5
Manes.11G069200 Manihot esculenta HOM05D005382 ORTHO05D006795 5.0e-52 208.0 136 80.9
PGR102G0492 Punica granatum HOM05D005382 ORTHO05D006795 5.0e-52 208.0 148 76.4
Potri.003G184925 Populus trichocarpa HOM05D005382 ORTHO05D006795 6.6e-52 207.6 148 76.4
MELO3C023486.2 Cucumis melo HOM05D005382 ORTHO05D006795 8.6e-52 207.2 136 78.7
Duzib235G0288 Durio zibethinus HOM05D005382 ORTHO05D006795 1.5e-51 206.5 136 80.9
Lj3g0027435 Lotus japonicus HOM05D005382 ORTHO05D006795 1.5e-51 206.5 139 76.3
Potri.001G041900 Populus trichocarpa HOM05D005382 ORTHO05D006795 1.5e-51 206.5 138 78.3
CiPaw.01G256500 Carya illinoinensis HOM05D005382 ORTHO05D006795 1.9e-51 206.1 141 76.6
Duzib192G0805 Durio zibethinus HOM05D005382 ORTHO05D006795 1.9e-51 206.1 136 79.4
QL05p036845 Quercus lobata HOM05D005382 ORTHO05D006795 1.9e-51 206.1 135 78.5
Rhsim08G0203100 Rhododendron simsii HOM05D005382 ORTHO05D006795 1.9e-51 206.1 135 78.5
Haze_16689 Corylus avellana HOM05D005382 ORTHO05D006795 2.5e-51 205.7 142 76.1
VMungo0647G2390 Vigna mungo HOM05D005382 ORTHO05D006795 2.5e-51 205.7 141 76.6
Cfa001857 Carpinus fangiana HOM05D005382 ORTHO05D006795 3.3e-51 205.3 142 76.1
Manes.04G100900 Manihot esculenta HOM05D005382 ORTHO05D006795 3.3e-51 205.3 130 81.5
Phvul.008G253200 Phaseolus vulgaris HOM05D005382 ORTHO05D006795 3.3e-51 205.3 132 80.3
Sabra03G0135500 Salix brachista HOM05D005382 ORTHO05D006795 3.3e-51 205.3 146 73.3
COL.COLO4_26772 Corchorus olitorius HOM05D005382 ORTHO05D006795 4.3e-51 204.9 141 76.6
Actinidia08935 Actinidia chinensis HOM05D005382 ORTHO05D006795 5.6e-51 204.5 150 73.3
FAN02G4537 Fragaria x ananassa HOM05D005382 ORTHO05D006795 5.6e-51 204.5 140 76.4
MSTRG.22842 Avicennia marina HOM05D005382 ORTHO05D006795 7.3e-51 204.1 144 72.9
CSS0039254 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 7.3e-51 204.1 139 79.1
CsaV3_7G031710 Cucumis sativus L. HOM05D005382 ORTHO05D006795 7.3e-51 204.1 129 80.6
MD17G1226400 Malus domestica HOM05D005382 ORTHO05D006795 7.3e-51 204.1 131 79.4
ClCG09G003490 Citrullus lanatus HOM05D005382 ORTHO05D006795 9.5e-51 203.8 133 79.7
FAN05G5289 Fragaria x ananassa HOM05D005382 ORTHO05D006795 1.2e-50 203.4 140 76.4
THA.LOC104808172 Tarenaya hassleriana HOM05D005382 ORTHO05D006795 1.2e-50 203.4 128 79.7
MD09G1227600 Malus domestica HOM05D005382 ORTHO05D006795 2.1e-50 202.6 139 76.3
Migut.I00626 Erythranthe guttata HOM05D005382 ORTHO05D006795 2.8e-50 202.2 140 73.6
Sabra01G0028700 Salix brachista HOM05D005382 ORTHO05D006795 2.8e-50 202.2 146 72.6
FvH4_6g28270 Fragaria vesca HOM05D005382 ORTHO05D006795 3.6e-50 201.8 140 75.7
MBI15_g08404_MAGBIO Magnolia biondii HOM05D005382 ORTHO05D006795 4.7e-50 201.4 130 80.8
FAN09G0036 Fragaria x ananassa HOM05D005382 ORTHO05D006795 6.2e-50 201.1 134 77.6
Lj5A81T85 Lonicera japonica HOM05D005382 ORTHO05D006795 6.2e-50 201.1 137 73.7
RcHm_v2.0_Chr2g0132311 Rosa chinensis HOM05D005382 ORTHO05D006795 6.2e-50 201.1 140 76.4
DCAR_021374 Daucus carota HOM05D005382 ORTHO05D006795 8.0e-50 200.7 140 75.0
Glyma.08G220400 Glycine max HOM05D005382 ORTHO05D006795 8.0e-50 200.7 137 75.2
HanXRQChr09g0274181 Helianthus annuus HOM05D005382 ORTHO05D006795 8.0e-50 200.7 144 72.2
Dinv21426 Davidia involucrata HOM05D005382 ORTHO05D006795 1.1e-49 200.3 128 80.5
SGA_v2.0_scaffold515G52664 Striga asiatica HOM05D003096 ORTHO05D003521 1.1e-49 200.3 140 73.6
CiPaw.02G163400 Carya illinoinensis HOM05D005382 ORTHO05D006795 1.4e-49 199.9 131 77.9
Glyma.07G021400 Glycine max HOM05D005382 ORTHO05D006795 1.4e-49 199.9 132 77.3
Sed0008280 Sechium edule HOM05D005382 ORTHO05D006795 1.4e-49 199.9 128 80.5
Aa31LG4G1250 Aethionema arabicum HOM05D005382 ORTHO05D006795 3.1e-49 198.7 134 76.1
Lsat_1_v5_gn_4_85061 Lactuca sativa HOM05D005382 ORTHO05D006795 3.1e-49 198.7 143 72.7
SalBow1G1272 Salvia bowleyana HOM05D005382 ORTHO05D006795 3.1e-49 198.7 147 72.1
MSTRG.9395 Avicennia marina HOM05D005382 ORTHO05D006795 6.8e-49 197.6 140 73.6
Hma1.2p1_0329F.1_g127290 Hydrangea macrophylla HOM05D005382 ORTHO05D006795 6.8e-49 197.6 135 75.6
Rhsim12G0185400 Rhododendron simsii HOM05D005382 ORTHO05D006795 6.8e-49 197.6 141 73.8
Sp5g34800 Schrenkiella parvula HOM05D005382 ORTHO05D006795 6.8e-49 197.6 133 75.9
BraA07t31983Z Brassica rapa HOM05D005382 ORTHO05D006795 8.9e-49 197.2 146 71.2
Gohir.D11G079900 Gossypium hirsutum HOM05D005382 ORTHO05D006795 8.9e-49 197.2 118 85.6
TWI12G1456 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 8.9e-49 197.2 149 73.2
TWI75G0559 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 8.9e-49 197.2 135 77.8
Eucgr.F03985 Eucalyptus grandis HOM05D005382 ORTHO05D006795 1.2e-48 196.8 135 74.8
Peaxi162Scf00314g01032 Petunia axillaris HOM05D005382 ORTHO05D006795 1.2e-48 196.8 141 73.0
C06p29630 Brassica napus HOM05D005382 ORTHO05D006795 1.5e-48 196.4 135 73.3
BolC6t38128H Brassica oleracea HOM05D005382 ORTHO05D006795 1.5e-48 196.4 135 73.3
CAN.G1008.7 Capsicum annuum HOM05D005382 ORTHO05D006795 1.5e-48 196.4 148 69.6
Medtr4g007700 Medicago truncatula HOM05D005382 ORTHO05D006795 1.5e-48 196.4 130 76.2
MSTRG.11221 Avicennia marina HOM05D005382 ORTHO05D006795 3.4e-48 195.3 140 72.1
BcaB02g07237 Brassica carinata HOM05D005382 ORTHO05D006795 3.4e-48 195.3 140 72.9
ECA247G2189 Erigeron canadensis HOM05D005382 ORTHO05D006795 3.4e-48 195.3 145 69.7
HanXRQChr04g0100021 Helianthus annuus HOM05D005382 ORTHO05D006795 3.4e-48 195.3 148 69.6
A07p44750 Brassica napus HOM05D005382 ORTHO05D006795 4.4e-48 194.9 146 70.5
Carub.0002s2660 Capsella rubella HOM05D005382 ORTHO05D006795 4.4e-48 194.9 135 73.3
CARHR073510 Cardamine hirsuta HOM05D005382 ORTHO05D006795 4.4e-48 194.9 135 73.3
Ciclev10026461m.g Citrus clementina HOM05D005382 ORTHO05D006795 4.4e-48 194.9 138 74.6
Nitab4.5_0004738g0090 Nicotiana tabacum HOM05D005382 ORTHO05D006795 4.4e-48 194.9 135 74.1
C06p53570 Brassica napus HOM05D005382 ORTHO05D006795 5.8e-48 194.5 138 73.2
Thhalv10019121m.g Eutrema salsugineum HOM05D005382 ORTHO05D006795 5.8e-48 194.5 129 76.7
Nitab4.5_0002700g0060 Nicotiana tabacum HOM05D005382 ORTHO05D006795 5.8e-48 194.5 137 74.5
Solyc03g117670.4 Solanum lycopersicum HOM05D005382 ORTHO05D006795 5.8e-48 194.5 148 68.9
GSVIVG01016103001 Vitis vinifera HOM05D005382 ORTHO05D006795 5.8e-48 194.5 135 76.3
Lsat_1_v5_gn_1_30801 Lactuca sativa HOM05D005382 ORTHO05D006795 7.5e-48 194.1 141 71.6
Sopen03g036580 Solanum pennellii HOM05D005382 ORTHO05D006795 7.5e-48 194.1 148 68.9
Lalb_Chr25g0278731 Lupinus albus HOM05D005382 ORTHO05D006795 9.8e-48 193.7 137 71.5
PGSC0003DMG400014155 Solanum tuberosum HOM05D005382 ORTHO05D006795 9.8e-48 193.7 141 71.6
BcaNung04166 Brassica carinata HOM05D005382 ORTHO05D006795 1.3e-47 193.4 129 76.0
A07p26960 Brassica napus HOM05D005382 ORTHO05D006795 1.3e-47 193.4 129 76.0
BraA07t30340Z Brassica rapa HOM05D005382 ORTHO05D006795 1.3e-47 193.4 129 76.0
PSO782G0145 Papaver somniferum HOM05D005382 ORTHO05D006795 1.3e-47 193.4 147 72.8
vmacro16842 Vaccinium macrocarpon HOM05D005382 ORTHO05D006795 1.3e-47 193.4 146 69.9
AT1G80940 Arabidopsis thaliana HOM05D005382 ORTHO05D006795 1.7e-47 193.0 140 72.9
BcaC08g47533 Brassica carinata HOM05D005382 ORTHO05D006795 1.7e-47 193.0 146 69.9
BolC6t40373H Brassica oleracea HOM05D005382 ORTHO05D006795 1.7e-47 193.0 146 69.9
BcaB02g08711 Brassica carinata HOM05D005382 ORTHO05D006795 3.7e-47 191.8 146 69.9
ECA232G4196 Erigeron canadensis HOM05D005382 ORTHO05D006795 3.7e-47 191.8 147 70.1
AL2G40440 Arabidopsis lyrata HOM05D005382 ORTHO05D006795 4.9e-47 191.4 129 76.0
FAN14G0578 Fragaria x ananassa HOM05D005382 ORTHO05D006795 6.4e-47 191.0 123 81.3
Oeu003125.1 Olea europaea HOM05D005382 ORTHO05D006795 6.4e-47 191.0 140 72.9
AUR62032996 Chenopodium quinoa HOM05D005382 ORTHO05D006795 8.3e-47 190.7 133 73.7
EL10Ac8g19398 Beta vulgaris HOM05D005382 ORTHO05D006795 1.1e-46 190.3 133 72.9
AUR62034069 Chenopodium quinoa HOM05D007611 ORTHO05D006795 1.1e-46 190.3 133 73.7
SGA_v2.0_scaffold74G24593 Striga asiatica HOM05D005382 ORTHO05D006795 1.4e-46 189.9 130 75.4
Sc12g0008250 Simmondsia chinensis HOM05D005382 ORTHO05D006795 1.9e-46 189.5 133 74.4
Eucgr.J03130 Eucalyptus grandis HOM05D005382 ORTHO05D006795 2.4e-46 189.1 139 70.5
Oeu051555.1 Olea europaea HOM05D005382 ORTHO05D006795 2.4e-46 189.1 140 72.9
PSO063G0682 Papaver somniferum HOM05D005382 ORTHO05D006795 3.2e-46 188.7 147 71.4
Lalb_Chr01g0011991 Lupinus albus HOM05D005382 ORTHO05D006795 2.0e-45 186.0 144 66.7
TPR.G3367 Trifolium pratense HOM05D005382 ORTHO05D006795 2.3e-44 182.6 116 79.3
Psat7g262200 Pisum sativum HOM05D005382 ORTHO05D006795 5.0e-44 181.4 116 78.4
HPP92_010348 Vanilla planifolia HOM05D005382 ORTHO05D006795 5.0e-44 181.4 142 69.7
Os02g0793900 Oryza sativa ssp. japonica HOM05D005382 ORTHO05D006795 2.5e-43 179.1 133 70.7
SEGI_41275 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 1.6e-42 176.4 128 74.2
Zm00001eb257680 Zea mays HOM05D005382 ORTHO05D006795 1.6e-42 176.4 133 69.9
ATR0580G392 Amborella trichopoda HOM05D005382 ORTHO05D006795 2.1e-42 176.0 133 71.4
CANSAT56G2690 Cannabis sativa HOM05D005382 ORTHO05D006795 2.3e-41 172.6 145 64.1
Cpa.g.c28380.1 Carica papaya HOM05D005382 ORTHO05D006795 5.8e-40 167.9 117 73.5
Mapoly0128s0009 Marchantia polymorpha HOM05D005382 ORTHO05D006795 1.9e-38 162.9 129 65.1
SMO145G0139 Selaginella moellendorffii HOM05D005382 ORTHO05D006795 1.6e-37 159.8 128 61.7
Pp3c16_25700 Physcomitrium patens HOM05D005382 ORTHO05D006795 2.7e-37 159.1 133 62.4
Pp3c25_9780 Physcomitrium patens HOM05D005382 ORTHO05D006795 4.6e-37 158.3 135 63.0
arahy.Tifrunner.gnm1.ann1.7IZ6IW Arachis hypogaea HOM05D005382 ORTHO05D006795 9.5e-35 150.6 134 64.2
arahy.Tifrunner.gnm1.ann1.HUQR60 Arachis hypogaea HOM05D005382 ORTHO05D006795 9.5e-35 150.6 134 64.2
Ah.14g085670 Amaranthus hybridus HOM05D005382 ORTHO05D006795 2.6e-32 142.5 133 58.6
SEGI_02613 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 2.2e-31 139.4 117 65.0
CSS0015514 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 3.4e-24 115.5 75 77.3
Hund12559 Selenicereus undatus HOM05D005382 ORTHO05D006795 9.9e-24 114.0 71 78.9
unitig_22.g6275 Utricularia gibba HOM05D005382 ORTHO05D006795 1.3e-23 113.6 74 79.7
Actinidia36864 Actinidia chinensis HOM05D005382 ORTHO05D006795 1.6e-21 106.7 136 50.0
BcaB07g33703 Brassica carinata HOM05D005382 ORTHO05D006795 1.0e-20 104.0 75 69.3
BcaB07g33704 Brassica carinata HOM05D005382 ORTHO05D006795 5.3e-17 91.7 65 70.8
BcaB07g33705 Brassica carinata HOM05D005382 ORTHO05D006795 5.3e-17 91.7 65 70.8
Atru.chr1.2804_Atru.chr1.2805 Acer truncatum HOM05D005382 ORTHO05D006795 6.9e-17 91.3 141 45.4
AagrBONN_evm.TU.Sc2ySwM_117.2014 Anthoceros agrestis HOM05D005382 ORTHO05D006795 2.0e-16 89.7 77 66.2
Actinidia26580 Actinidia chinensis HOM05D005382 ORTHO05D006795 7.6e-16 87.8 68 69.1
TPR.G1583 Trifolium pratense HOM05D005382 ORTHO05D006795 4.0e-09 65.5 45 73.3


User provided reference genes

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