Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1686 Ceratophyllum demersum HOM05D003722 ORTHO05D004589 0.0e+00 1196.8 825 100.0
GSVIVG01035469001 Vitis vinifera HOM05D003722 ORTHO05D004589 4.2e-164 582.8 737 66.8
Dinv02138 Davidia involucrata HOM05D003722 ORTHO05D004589 1.8e-159 567.4 784 61.0
MBI19_g11832_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 2.1e-155 553.9 735 66.5
TAR624G1180 Trochodendron aralioides HOM05D003722 ORTHO05D004589 2.1e-155 553.9 795 61.1
Prupe.1G404200 Prunus persica HOM05D003722 ORTHO05D004589 1.0e-154 551.6 729 63.1
CiPaw.15G091900 Carya illinoinensis HOM05D003722 ORTHO05D004589 6.7e-154 548.9 713 64.0
Nitab4.5_0000446g0200 Nicotiana tabacum HOM05D003722 ORTHO05D004589 9.6e-153 545.0 649 67.6
Nn6g35614 Nelumbo nucifera HOM05D003722 ORTHO05D004589 1.3e-152 544.7 727 67.4
HanXRQChr09g0261801 Helianthus annuus HOM05D003722 ORTHO05D004589 8.1e-152 542.0 732 62.3
Potri.018G048700 Populus trichocarpa HOM05D003722 ORTHO05D004589 3.4e-150 536.6 738 64.9
ATR0598G202 Amborella trichopoda HOM05D003722 ORTHO05D004589 1.0e-149 535.0 708 67.1
TAR636G3697 Trochodendron aralioides HOM05D003722 ORTHO05D004589 2.2e-149 533.9 737 59.8
RcHm_v2.0_Chr6g0311801 Rosa chinensis HOM05D003722 ORTHO05D004589 9.3e-148 528.5 736 61.7
Hma1.2p1_0836F.1_g225970 Hydrangea macrophylla HOM05D003722 ORTHO05D004589 8.7e-146 521.9 732 66.3
MD15G1049900 Malus domestica HOM05D003722 ORTHO05D004589 2.5e-145 520.4 735 61.8
Potri.006G220900 Populus trichocarpa HOM05D003722 ORTHO05D004589 2.1e-144 517.3 727 65.5
PSO135G0299 Papaver somniferum HOM05D003722 ORTHO05D004589 4.8e-144 516.2 735 62.3
Oeu036060.1 Olea europaea HOM05D003722 ORTHO05D004589 2.4e-143 513.8 656 70.0
Haze_18293 Corylus avellana HOM05D003722 ORTHO05D004589 3.1e-143 513.5 737 63.0
Aqoxy7G04082 Aquilegia oxysepala HOM05D003722 ORTHO05D004589 9.0e-143 511.9 744 61.6
TAR626G0360 Trochodendron aralioides HOM05D003722 ORTHO05D004589 1.2e-142 511.5 731 64.8
Sabra18G0046400 Salix brachista HOM05D003722 ORTHO05D004589 1.5e-142 511.1 738 62.2
Manes.16G085600 Manihot esculenta HOM05D003722 ORTHO05D004589 3.4e-142 510.0 726 63.9
TAR626G0824 Trochodendron aralioides HOM05D003722 ORTHO05D004589 4.5e-142 509.6 731 65.0
PSO724G0454 Papaver somniferum HOM05D003722 ORTHO05D004589 5.9e-142 509.2 748 63.1
Nitab4.5_0002831g0060 Nicotiana tabacum HOM05D003722 ORTHO05D004589 1.0e-141 508.4 650 68.2
Manes.03G053433 Manihot esculenta HOM05D003722 ORTHO05D004589 1.3e-141 508.1 731 66.8
Sed0000287 Sechium edule HOM05D003722 ORTHO05D004589 1.7e-141 507.7 776 63.5
Atru.chr7.1848 Acer truncatum HOM05D003722 ORTHO05D004589 2.9e-141 506.9 694 68.7
CAN.G881.1 Capsicum annuum HOM05D003722 ORTHO05D004589 1.4e-140 504.6 656 66.5
Peaxi162Scf00486g01029 Petunia axillaris HOM05D003722 ORTHO05D004589 1.4e-140 504.6 650 67.5
MD08G1071300 Malus domestica HOM05D003722 ORTHO05D004589 1.9e-140 504.2 743 62.2
Lj7A221G29 Lonicera japonica HOM05D003722 ORTHO05D004589 2.5e-140 503.8 691 60.9
Phvul.009G081900 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 9.3e-140 501.9 722 63.3
CiPaw.16G068500 Carya illinoinensis HOM05D003722 ORTHO05D004589 6.1e-139 499.2 724 65.9
Glyma.14G098900 Glycine max HOM05D003722 ORTHO05D004589 7.9e-139 498.8 749 63.0
Lj5g0007526 Lotus japonicus HOM05D003722 ORTHO05D004589 1.3e-138 498.0 740 62.2
Dinv41842 Davidia involucrata HOM05D003722 ORTHO05D004589 2.3e-138 497.3 733 64.0
TWI32G0253 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 5.1e-138 496.1 725 65.0
QL02p017002 Quercus lobata HOM05D003722 ORTHO05D004589 1.9e-137 494.2 724 63.7
CSS0048906 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 1.3e-136 491.5 649 68.7
CSS0013734 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 1.6e-136 491.1 733 63.4
VMungo0647G1341 Vigna mungo HOM05D003722 ORTHO05D004589 2.2e-136 490.7 722 63.3
Glyma.17G225800 Glycine max HOM05D003722 ORTHO05D004589 2.8e-136 490.3 652 69.6
HanXRQChr05g0135941 Helianthus annuus HOM05D003722 ORTHO05D004589 3.7e-136 490.0 731 59.4
vmacro07490 Vaccinium macrocarpon HOM05D003722 ORTHO05D004589 4.8e-136 489.6 657 63.6
Migut.E01781 Erythranthe guttata HOM05D003722 ORTHO05D004589 8.2e-136 488.8 634 67.7
Sc23g0004200 Simmondsia chinensis HOM05D003722 ORTHO05D004589 8.2e-136 488.8 800 58.5
MSTRG.25985 Avicennia marina HOM05D003722 ORTHO05D004589 1.1e-135 488.4 729 64.1
Sabra06G0170700 Salix brachista HOM05D003722 ORTHO05D004589 6.9e-135 485.7 817 56.4
Rhsim03G0063100 Rhododendron simsii HOM05D003722 ORTHO05D004589 1.2e-134 485.0 724 63.7
TPR.G38933 Trifolium pratense HOM05D003722 ORTHO05D004589 1.2e-134 485.0 707 61.8
Medtr1g015450 Medicago truncatula HOM05D003722 ORTHO05D004589 2.0e-134 484.2 655 65.8
Eucgr.C03158 Eucalyptus grandis HOM05D003722 ORTHO05D004589 2.6e-134 483.8 729 63.9
Lalb_Chr22g0356231 Lupinus albus HOM05D003722 ORTHO05D004589 4.5e-134 483.0 721 63.7
Nn8g38669 Nelumbo nucifera HOM05D003722 ORTHO05D004589 7.7e-134 482.3 746 63.4
Ciclev10007327m.g Citrus clementina HOM05D003722 ORTHO05D004589 1.0e-133 481.9 734 62.9
Ca_13110_v3 Cicer arietinum L. HOM05D003722 ORTHO05D004589 1.7e-133 481.1 722 62.9
arahy.Tifrunner.gnm1.ann1.JX1TK4 Arachis hypogaea HOM05D003722 ORTHO05D004589 5.0e-133 479.6 728 62.0
ClCG05G015740 Citrullus lanatus HOM05D003722 ORTHO05D004589 5.0e-133 479.6 754 61.4
Lsat_1_v5_gn_8_70661 Lactuca sativa HOM05D003722 ORTHO05D004589 1.1e-132 478.4 734 62.5
SEGI_30451 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 1.1e-132 478.4 742 60.2
TWI34G0168 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 1.4e-132 478.0 723 63.9
DCAR_004379 Daucus carota HOM05D003722 ORTHO05D004589 3.2e-132 476.9 728 62.1
Migut.A00079 Erythranthe guttata HOM05D003722 ORTHO05D004589 7.2e-132 475.7 650 67.4
Gohir.D06G083100 Gossypium hirsutum HOM05D003722 ORTHO05D004589 7.2e-132 475.7 728 63.3
FAN27G2597 Fragaria x ananassa HOM05D003722 ORTHO05D004589 9.4e-132 475.3 739 49.5
FvH4_2g30970 Fragaria vesca HOM05D003722 ORTHO05D004589 1.2e-131 474.9 728 61.5
FAN24G1820 Fragaria x ananassa HOM05D003722 ORTHO05D004589 1.6e-131 474.6 728 61.5
CsaV3_4G036040 Cucumis sativus L. HOM05D003722 ORTHO05D004589 2.1e-131 474.2 729 62.3
VMungo1309G1038 Vigna mungo HOM05D003722 ORTHO05D004589 2.7e-131 473.8 719 61.5
PGSC0003DMG400018806 Solanum tuberosum HOM05D003722 ORTHO05D004589 1.4e-130 471.5 634 65.0
PGR044G0665 Punica granatum HOM05D003722 ORTHO05D004589 1.8e-130 471.1 736 62.6
Glyma.06G055800 Glycine max HOM05D003722 ORTHO05D004589 2.3e-130 470.7 724 58.6
DCAR_001223 Daucus carota HOM05D003722 ORTHO05D004589 8.8e-130 468.8 733 63.2
FAN20G0071 Fragaria x ananassa HOM05D003722 ORTHO05D004589 8.8e-130 468.8 716 61.7
SGA_v2.0_scaffold163G37999 Striga asiatica HOM05D003722 ORTHO05D004589 1.1e-129 468.4 652 66.7
Gohir.A07G019700 Gossypium hirsutum HOM05D003722 ORTHO05D004589 1.5e-129 468.0 755 59.6
Lalb_Chr23g0267971 Lupinus albus HOM05D003722 ORTHO05D004589 2.8e-128 463.8 737 53.7
Gohir.D07G019500 Gossypium hirsutum HOM05D003722 ORTHO05D004589 4.8e-128 463.0 742 59.8
Solyc08g061820.3 Solanum lycopersicum HOM05D003722 ORTHO05D004589 8.2e-128 462.2 650 63.7
Sopen08g017250 Solanum pennellii HOM05D003722 ORTHO05D004589 1.1e-127 461.8 650 63.7
arahy.Tifrunner.gnm1.ann1.G8USHK Arachis hypogaea HOM05D003722 ORTHO05D004589 1.4e-127 461.5 663 64.7
Duzib187G0791 Durio zibethinus HOM05D003722 ORTHO05D004589 2.4e-127 460.7 756 59.1
Sed0027838 Sechium edule HOM05D003722 ORTHO05D004589 4.1e-127 459.9 696 65.1
HanXRQChr03g0065591 Helianthus annuus HOM05D003722 ORTHO05D004589 5.3e-127 459.5 647 66.2
Gorai.010G096600 Gossypium raimondii HOM05D003722 ORTHO05D004589 1.5e-126 458.0 747 58.2
C03p86790 Brassica napus HOM05D003722 ORTHO05D004589 2.0e-126 457.6 638 63.3
ECA236G0039 Erigeron canadensis HOM05D003722 ORTHO05D004589 4.5e-126 456.4 640 66.6
SalBow4G2891 Salvia bowleyana HOM05D003722 ORTHO05D004589 5.9e-126 456.1 652 62.7
Actinidia27552 Actinidia chinensis HOM05D003722 ORTHO05D004589 7.7e-126 455.7 736 60.1
arahy.Tifrunner.gnm1.ann1.V7LPDI Arachis hypogaea HOM05D003722 ORTHO05D004589 1.0e-125 455.3 650 63.8
COL.COLO4_21138 Corchorus olitorius HOM05D003722 ORTHO05D004589 1.3e-125 454.9 742 59.3
Thecc.09G063300 Theobroma cacao HOM05D003722 ORTHO05D004589 1.7e-125 454.5 762 60.0
Gorai.001G020200 Gossypium raimondii HOM05D003722 ORTHO05D004589 6.5e-125 452.6 742 59.0
Phvul.001G038700 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 6.5e-125 452.6 722 61.8
arahy.Tifrunner.gnm1.ann1.V9GZ7C Arachis hypogaea HOM05D003722 ORTHO05D004589 2.5e-124 450.7 650 66.3
BcaC01g01002 Brassica carinata HOM05D003722 ORTHO05D004589 2.1e-123 447.6 638 62.4
BolC3t20973H Brassica oleracea HOM05D003722 ORTHO05D004589 2.1e-123 447.6 638 62.4
BcaB03g12811 Brassica carinata HOM05D003722 ORTHO05D004589 1.8e-122 444.5 634 64.8
THA.LOC104803705 Tarenaya hassleriana HOM05D003722 ORTHO05D004589 2.3e-122 444.1 732 62.3
MBI13_g31962_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 1.1e-121 441.8 687 56.0
Glyma.04G055700 Glycine max HOM05D003722 ORTHO05D004589 5.7e-121 439.5 727 56.3
Pp3c5_23900 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.3e-120 438.3 647 59.7
MELO3C016912.2 Cucumis melo HOM05D003722 ORTHO05D004589 4.8e-120 436.4 797 49.8
CANSAT25G1471 Cannabis sativa HOM05D003722 ORTHO05D004589 3.1e-119 433.7 728 57.1
Lalb_Chr08g0244821 Lupinus albus HOM05D003722 ORTHO05D004589 3.1e-119 433.7 731 57.6
Carub.0007s0725 Capsella rubella HOM05D003722 ORTHO05D004589 6.5e-117 426.0 730 58.8
SGA_v2.0_scaffold64G21877 Striga asiatica HOM05D003722 ORTHO05D004589 6.5e-117 426.0 733 58.9
BcaNung02160 Brassica carinata HOM05D003722 ORTHO05D004589 1.9e-116 424.5 726 59.4
BolC7t46400H Brassica oleracea HOM05D003722 ORTHO05D004589 1.9e-116 424.5 726 59.4
SGA_v2.0_scaffold169G38713 Striga asiatica HOM05D003722 ORTHO05D004589 1.6e-115 421.4 653 61.3
AT4G33210 Arabidopsis thaliana HOM05D003722 ORTHO05D004589 3.6e-115 420.2 736 56.5
EL10Ac2g03782 Beta vulgaris HOM05D003722 ORTHO05D004589 8.0e-115 419.1 730 53.6
BolC3t20974H Brassica oleracea HOM05D003722 ORTHO05D004589 2.3e-114 417.5 739 56.7
BraA01t00479Z Brassica rapa HOM05D003722 ORTHO05D004589 3.0e-114 417.2 726 58.7
A01p04970 Brassica napus HOM05D003722 ORTHO05D004589 4.0e-114 416.8 726 58.5
Sp7g30950 Schrenkiella parvula HOM05D003722 ORTHO05D004589 1.2e-113 415.2 727 58.3
C01p05420 Brassica napus HOM05D003722 ORTHO05D004589 2.6e-113 414.1 726 58.4
BraA03t15228Z Brassica rapa HOM05D003722 ORTHO05D004589 4.4e-113 413.3 726 56.7
HPP92_006154 Vanilla planifolia HOM05D003722 ORTHO05D004589 5.7e-113 412.9 715 56.8
BraA08t33724Z Brassica rapa HOM05D003722 ORTHO05D004589 3.7e-112 410.2 639 57.3
BolC1t00522H Brassica oleracea HOM05D003722 ORTHO05D004589 6.3e-112 409.5 731 57.9
Mapoly0202s0013 Marchantia polymorpha HOM05D003722 ORTHO05D004589 1.1e-111 408.7 651 57.8
SMO238G0031 Selaginella moellendorffii HOM05D003722 ORTHO05D004589 3.1e-111 407.1 627 60.3
Duzib168G1968 Durio zibethinus HOM05D003722 ORTHO05D004589 5.3e-111 406.4 787 48.8
Aa31sc290G30 Aethionema arabicum HOM05D003722 ORTHO05D004589 1.3e-109 401.7 726 57.6
SEGI_01273 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 1.3e-109 401.7 767 56.1
AL7G18350 Arabidopsis lyrata HOM05D003722 ORTHO05D004589 2.2e-109 401.0 730 57.8
Medtr1g015480 Medicago truncatula HOM05D003722 ORTHO05D004589 2.2e-109 401.0 625 61.9
BcaC09g52132 Brassica carinata HOM05D003722 ORTHO05D004589 1.1e-108 398.7 727 57.8
Thhalv10024312m.g Eutrema salsugineum HOM05D003722 ORTHO05D004589 3.2e-108 397.1 792 54.7
CARHR241240 Cardamine hirsuta HOM05D003722 ORTHO05D004589 2.7e-107 394.0 729 56.0
C03p86800 Brassica napus HOM05D003722 ORTHO05D004589 3.6e-107 393.7 739 54.8
A08p17740 Brassica napus HOM05D003722 ORTHO05D004589 4.7e-107 393.3 638 60.8
AUR62009080 Chenopodium quinoa HOM05D003722 ORTHO05D004589 1.2e-105 388.7 747 51.1
A08p17750 Brassica napus HOM05D003722 ORTHO05D004589 1.5e-105 388.3 730 53.7
MBI13_g13882_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 3.4e-105 387.1 404 63.1
BraA08t33725Z Brassica rapa HOM05D003722 ORTHO05D004589 1.3e-104 385.2 730 53.7
Psat6g022880 Pisum sativum HOM05D003722 ORTHO05D004589 1.4e-103 381.7 725 50.5
AUR62020586 Chenopodium quinoa HOM05D003722 ORTHO05D004589 2.0e-102 377.9 653 58.5
unitig_4.g30332 Utricularia gibba HOM05D003722 ORTHO05D004589 2.7e-102 377.5 638 46.9
Pp3c4_12360 Physcomitrium patens HOM05D003722 ORTHO05D004589 5.5e-100 369.8 755 53.5
unitig_748.g8237 Utricularia gibba HOM05D003722 ORTHO05D004589 1.6e-99 368.2 638 61.4
Hund19422 Selenicereus undatus HOM05D003722 ORTHO05D004589 3.6e-99 367.1 743 47.9
Pp3c12_17410 Physcomitrium patens HOM05D003722 ORTHO05D004589 2.8e-96 357.5 726 43.3
Zm00001eb048660 Zea mays HOM05D003722 ORTHO05D004589 2.4e-95 354.4 448 52.9
CBR_g11995 Chara braunii HOM05D003722 ORTHO05D004589 4.3e-92 343.6 649 54.9
Pp3c6_6070 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.2e-91 342.0 654 48.3
TWI39G1239 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 5.2e-90 336.7 576 58.7
Cc08_g01170 Coffea canephora HOM05D003722 ORTHO05D004589 1.0e-85 322.4 399 61.7
Zm00001eb223490 Zea mays HOM05D003722 ORTHO05D004589 8.0e-83 312.8 488 47.7
AagrBONN_evm.TU.Sc2ySwM_117.2463 Anthoceros agrestis HOM05D003722 ORTHO05D004589 1.1e-82 312.4 608 58.1
Gohir.A06G081600 Gossypium hirsutum HOM05D003722 ORTHO05D004589 5.2e-82 310.1 519 62.0
Cpa.g.sc126.25 Carica papaya HOM05D003722 ORTHO05D004589 1.7e-77 295.0 519 67.2
Sc09g0010110 Simmondsia chinensis HOM05D003722 ORTHO05D004589 1.8e-66 258.5 581 51.8
Os10g0396400 Oryza sativa ssp. japonica HOM05D003722 ORTHO05D004589 1.7e-61 241.9 479 59.7
Actinidia25690 Actinidia chinensis HOM05D003722 ORTHO05D004589 6.4e-56 223.4 485 66.4
SHI18847 Sapria himalayana HOM05D000105 ORTHO05D000023 5.1e-53 213.8 312 45.8
Oeu028128.1 Olea europaea HOM05D003722 ORTHO05D004589 4.6e-46 190.7 328 60.7
SalBow1G2799 Salvia bowleyana HOM05D003722 ORTHO05D004589 1.8e-45 188.7 480 65.0
Oeu022303.1 Olea europaea HOM05D003722 ORTHO05D004589 5.6e-44 183.7 131 69.5
Psat3g079480 Pisum sativum HOM05D003722 ORTHO05D004589 8.1e-43 179.9 131 68.7
Actinidia25691 Actinidia chinensis HOM05D003722 ORTHO05D004589 4.5e-41 174.1 216 47.7
Gohir.A06G081780 Gossypium hirsutum HOM05D003722 ORTHO05D004589 6.9e-34 150.2 183 47.5
Cc08_g01160 Coffea canephora HOM05D003722 ORTHO05D004589 2.5e-31 141.7 104 71.2
VMungo0720G2633 Vigna mungo HOM05D003722 ORTHO05D004589 3.4e-25 121.3 88 67.0
Cpa.g.sc126.26 Carica papaya HOM05D003722 ORTHO05D004589 4.2e-23 114.4 115 49.6
ECA236G4568 Erigeron canadensis HOM05D000007 ORTHO05D000039 1.3e-16 92.8 69 69.6
Psat5g213240 Pisum sativum HOM05D003722 ORTHO05D004589 1.4e-15 89.4 66 65.2
Ah.11g044300 Amaranthus hybridus HOM05D003722 ORTHO05D004589 1.1e-12 79.7 56 69.6
Mapoly0101s0054 Marchantia polymorpha HOM05D003722 ORTHO05D004589 9.1e-10 70.1 56 57.1
SalBow1G8614 Salvia bowleyana HOM05D003722 ORTHO05D050768 8.5e-08 63.5 239 60.3
VMungo0251G0605 Vigna mungo HOM05D003722 ORTHO05D001926 1.1e-07 63.2 66 51.5


User provided reference genes

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