Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1640 Ceratophyllum demersum HOM05D006176 ORTHO05D007346 3.7e-100 368.2 189 100.0
MBI13_g35417_MAGBIO Magnolia biondii HOM05D006176 ORTHO05D007346 3.1e-14 82.8 121 44.6
MBI19_g09833_MAGBIO Magnolia biondii HOM05D006176 ORTHO05D007346 2.5e-11 73.2 106 44.3
Ah.08g216920 Amaranthus hybridus HOM05D006176 ORTHO05D007346 9.3e-11 71.2 104 40.4
Aqoxy2G03952 Aquilegia oxysepala HOM05D006176 ORTHO05D007346 9.3e-11 71.2 139 33.1
Gohir.A05G139800 Gossypium hirsutum HOM05D006176 ORTHO05D007346 4.6e-10 68.9 125 36.0
Nn8g38624 Nelumbo nucifera HOM05D006176 ORTHO05D007346 4.6e-10 68.9 135 37.0
Gohir.D05G142000 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.0e-09 67.8 125 36.0
Gorai.009G146100 Gossypium raimondii HOM05D006176 ORTHO05D007346 1.0e-09 67.8 125 36.0
Duzib192G0929 Durio zibethinus HOM05D006176 ORTHO05D007346 2.3e-09 66.6 85 40.0
Thecc.06G122200 Theobroma cacao HOM05D006176 ORTHO05D007346 3.0e-09 66.2 113 35.4
Lsat_1_v5_gn_4_94161 Lactuca sativa HOM05D006176 ORTHO05D007346 3.9e-09 65.9 100 39.0
COL.COLO4_30741 Corchorus olitorius HOM05D006176 ORTHO05D007346 8.7e-09 64.7 85 40.0
Glyma.16G008800 Glycine max HOM05D006176 ORTHO05D007346 8.7e-09 64.7 112 38.4
Nitab4.5_0000255g0320 Nicotiana tabacum HOM05D006176 ORTHO05D007346 8.7e-09 64.7 123 38.2
PSO421G0391 Papaver somniferum HOM05D006176 ORTHO05D007346 8.7e-09 64.7 106 43.4
Nitab4.5_0010678g0020 Nicotiana tabacum HOM05D006176 ORTHO05D007346 1.5e-08 63.9 101 42.6
PGSC0003DMG400004890 Solanum tuberosum HOM05D006176 ORTHO05D007346 1.5e-08 63.9 86 43.0
EL10Ac7g16423 Beta vulgaris HOM05D006176 ORTHO05D007346 1.9e-08 63.5 118 34.7
Phvul.010G128700 Phaseolus vulgaris HOM05D006176 ORTHO05D007346 1.9e-08 63.5 110 35.5
SGA_v2.0_scaffold122G33347 Striga asiatica HOM05D006176 ORTHO05D007346 2.5e-08 63.2 103 35.9
Manes.04G145900 Manihot esculenta HOM05D006176 ORTHO05D007346 4.3e-08 62.4 99 36.4
Sopen06g022380 Solanum pennellii HOM05D006176 ORTHO05D007346 4.3e-08 62.4 86 38.4
TAR624G0214 Trochodendron aralioides HOM05D006176 ORTHO05D007346 5.7e-08 62.0 116 34.5
CiPaw.01G217500 Carya illinoinensis HOM05D006176 ORTHO05D007346 7.4e-08 61.6 120 30.8
Glyma.07G040000 Glycine max HOM05D006176 ORTHO05D007346 1.3e-07 60.8 91 40.7
CANSAT56G3952 Cannabis sativa HOM05D006176 ORTHO05D007346 1.6e-07 60.5 86 43.0
Cfa003523 Carpinus fangiana HOM05D006176 ORTHO05D007346 1.6e-07 60.5 118 34.7
Haze_16045 Corylus avellana HOM05D006176 ORTHO05D007346 1.6e-07 60.5 105 36.2
Sed0000884 Sechium edule HOM05D006176 ORTHO05D007346 3.7e-07 59.3 103 38.8
Actinidia26022 Actinidia chinensis HOM05D006176 ORTHO05D007346 4.8e-07 58.9 84 39.3
DCAR_022691 Daucus carota HOM05D006176 ORTHO05D007346 4.8e-07 58.9 82 34.1
Solyc06g062930.1 Solanum lycopersicum HOM05D006176 ORTHO05D007346 4.8e-07 58.9 103 35.9
Medtr8g021025 Medicago truncatula HOM05D006176 ORTHO05D007346 6.3e-07 58.5 99 36.4
PSO063G0286 Papaver somniferum HOM05D006176 ORTHO05D007346 6.3e-07 58.5 89 44.9
Atru.chr1.4004 Acer truncatum HOM05D006176 ORTHO05D007346 8.2e-07 58.2 94 39.4
Atru.chr1.4021 Acer truncatum HOM05D006176 ORTHO05D007346 8.2e-07 58.2 104 36.5
Ca_23393_v3 Cicer arietinum L. HOM05D006176 ORTHO05D007346 8.2e-07 58.2 99 37.4
Lj3g0022886 Lotus japonicus HOM05D006176 ORTHO05D007346 8.2e-07 58.2 108 35.2
Cpa.g.c40357 Carica papaya HOM05D006176 ORTHO05D007346 2.4e-06 56.6 83 42.2
FAN09G3283 Fragaria x ananassa HOM05D006176 ORTHO05D007346 2.4e-06 56.6 117 34.2
Sc12g0010640 Simmondsia chinensis HOM05D006176 ORTHO05D007346 4.1e-06 55.8 113 35.4
TPR.G16753 Trifolium pratense HOM05D006176 ORTHO05D007346 4.1e-06 55.8 86 38.4
TWI75G0921 Tripterygium wilfordii HOM05D006176 ORTHO05D007346 5.3e-06 55.5 83 37.3
Migut.I01087 Erythranthe guttata HOM05D006176 ORTHO05D007346 6.9e-06 55.1 99 31.3
Potri.001G167600 Populus trichocarpa HOM05D006176 ORTHO05D007346 6.9e-06 55.1 103 35.0
Potri.003G067200 Populus trichocarpa HOM05D006176 ORTHO05D007346 9.0e-06 54.7 119 30.3


User provided reference genes

Program Settings