Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 1.4e-96 356.3 184 100.0
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 4.1e-80 301.6 183 88.0
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 2.3e-38 162.9 117 69.2
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 3.0e-38 162.5 185 54.6
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 6.7e-38 161.4 183 53.6
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 2.5e-37 159.5 152 58.6
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 7.4e-37 157.9 187 55.1
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 7.4e-37 157.9 143 58.7
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 9.6e-37 157.5 132 63.6
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 9.6e-37 157.5 129 64.3
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 1.3e-36 157.1 131 64.9
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 1.6e-36 156.8 125 64.8
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 2.1e-36 156.4 131 64.9
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 4.8e-36 155.2 128 63.3
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 4.8e-36 155.2 173 53.8
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 6.2e-36 154.8 128 64.8
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 1.1e-35 154.1 133 60.2
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 1.1e-35 154.1 116 69.0
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 1.8e-35 153.3 114 68.4
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 4.1e-35 152.1 101 74.3
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 4.1e-35 152.1 101 75.2
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 5.3e-35 151.8 155 54.8
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 5.3e-35 151.8 149 58.4
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 5.3e-35 151.8 113 69.0
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 9.0e-35 151.0 120 66.7
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 9.0e-35 151.0 120 66.7
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 9.0e-35 151.0 183 51.9
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 1.2e-34 150.6 115 67.0
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 1.5e-34 150.2 122 65.6
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 2.0e-34 149.8 95 76.8
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 2.6e-34 149.4 173 53.2
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 2.6e-34 149.4 150 57.3
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 4.5e-34 148.7 127 61.4
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 5.8e-34 148.3 130 60.8
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 5.8e-34 148.3 118 65.3
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 5.8e-34 148.3 108 68.5
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 7.6e-34 147.9 146 57.5
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 1.0e-33 147.5 102 73.5
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 1.0e-33 147.5 116 66.4
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 1.3e-33 147.1 102 72.5
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 1.3e-33 147.1 101 72.3
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 2.2e-33 146.4 122 61.5
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 2.2e-33 146.4 111 66.7
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 2.9e-33 146.0 90 77.8
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 3.8e-33 145.6 84 82.1
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 3.8e-33 145.6 111 67.6
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 5.0e-33 145.2 96 75.0
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 5.0e-33 145.2 101 69.3
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 6.5e-33 144.8 104 72.1
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 6.5e-33 144.8 101 69.3
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 6.5e-33 144.8 101 69.3
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 6.5e-33 144.8 101 69.3
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 8.4e-33 144.4 97 71.1
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 8.4e-33 144.4 84 82.1
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 1.1e-32 144.1 145 57.2
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 1.1e-32 144.1 157 56.1
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.1e-32 144.1 116 64.7
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.1e-32 144.1 83 81.9
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.1e-32 144.1 83 81.9
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 1.1e-32 144.1 185 50.3
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 1.1e-32 144.1 155 55.5
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 1.1e-32 144.1 101 71.3
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 1.4e-32 143.7 84 82.1
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.4e-32 143.7 120 64.2
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 1.4e-32 143.7 100 73.0
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 1.9e-32 143.3 101 71.3
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 1.9e-32 143.3 100 69.0
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.9e-32 143.3 120 63.3
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 3.2e-32 142.5 101 68.3
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 3.2e-32 142.5 101 67.3
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 3.2e-32 142.5 156 53.8
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 4.2e-32 142.1 139 59.0
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 5.5e-32 141.7 86 79.1
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 5.5e-32 141.7 101 68.3
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 5.5e-32 141.7 101 68.3
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 5.5e-32 141.7 86 76.7
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 7.2e-32 141.4 84 78.6
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 7.2e-32 141.4 84 78.6
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 7.2e-32 141.4 84 78.6
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 7.2e-32 141.4 84 78.6
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 7.2e-32 141.4 100 68.0
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 7.2e-32 141.4 81 82.7
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 7.2e-32 141.4 84 78.6
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 9.3e-32 141.0 101 68.3
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 1.6e-31 140.2 81 81.5
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 2.1e-31 139.8 137 57.7
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 2.1e-31 139.8 101 67.3
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 2.7e-31 139.4 83 78.3
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 4.6e-31 138.7 83 77.1
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 4.6e-31 138.7 83 77.1
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 4.6e-31 138.7 99 69.7
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 6.1e-31 138.3 99 70.7
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 1.3e-30 137.1 108 66.7
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 1.3e-30 137.1 84 77.4
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 1.3e-30 137.1 174 50.6
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.8e-30 136.7 94 69.1
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 1.8e-30 136.7 81 79.0
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 8.7e-30 134.4 118 60.2
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 1.1e-29 134.0 94 70.2
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 1.5e-29 133.7 88 70.5
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 1.9e-29 133.3 94 71.3
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 2.2e-28 129.8 94 67.0
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 1.4e-27 127.1 162 46.3
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.0e-22 109.4 149 49.0
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 4.3e-21 105.5 122 46.7
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 5.7e-21 105.1 95 51.6
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 3.1e-19 99.4 57 82.5
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 1.2e-18 97.4 54 85.2
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 1.3e-17 94.0 54 79.6
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 1.3e-17 94.0 54 79.6
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 1.3e-17 94.0 59 76.3
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 1.3e-17 94.0 55 80.0
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 6.5e-17 91.7 157 38.2
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 8.5e-17 91.3 53 79.2
PRCOL_00000692 Prasinoderma coloniale HOM05D007021 ORTHO05D008916 5.1e-14 82.0 83 49.4


User provided reference genes

Program Settings