Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1566 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 1.1e-75 286.6 150 100.0
MBI16_g31257_MAGBIO Magnolia biondii HOM05D005482 ORTHO05D006502 6.0e-29 131.3 160 53.1
GSVIVG01002660001 Vitis vinifera HOM05D005482 ORTHO05D006502 4.5e-24 115.2 161 49.1
Manes.12G125300 Manihot esculenta HOM05D005482 ORTHO05D006502 1.9e-22 109.8 161 47.2
Actinidia24562 Actinidia chinensis HOM05D005482 ORTHO05D006502 3.2e-22 109.0 143 50.3
Nn1g05603 Nelumbo nucifera HOM05D005482 ORTHO05D006502 5.5e-22 108.2 163 46.6
Dinv36943 Davidia involucrata HOM05D005482 ORTHO05D006502 5.1e-20 101.7 172 45.9
Aqoxy5G01366 Aquilegia oxysepala HOM05D005482 ORTHO05D006502 1.1e-19 100.5 162 44.4
CSS0020800 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 2.5e-19 99.4 155 45.2
CSS0030560 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 2.5e-19 99.4 143 46.9
Dinv13587 Davidia involucrata HOM05D005482 ORTHO05D006502 5.7e-19 98.2 165 45.5
Hma1.2p1_0369F.1_g137400 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 7.4e-19 97.8 165 46.7
HPP92_017563 Vanilla planifolia HOM05D005482 ORTHO05D006502 7.4e-19 97.8 150 48.0
CDE04G1142 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 1.3e-18 97.1 84 67.9
MD01G1040900 Malus domestica HOM05D005482 ORTHO05D006502 4.8e-18 95.1 164 43.9
QL06p035944 Quercus lobata HOM05D005482 ORTHO05D006502 4.8e-18 95.1 159 45.9
Sc03g0000430 Simmondsia chinensis HOM05D005482 ORTHO05D006502 4.8e-18 95.1 153 47.1
TAR625G0934 Trochodendron aralioides HOM05D005482 ORTHO05D006502 6.3e-18 94.7 160 45.6
CiPaw.07G046300 Carya illinoinensis HOM05D005482 ORTHO05D006502 8.2e-18 94.4 154 44.2
vmacro18548 Vaccinium macrocarpon HOM05D005482 ORTHO05D006502 8.2e-18 94.4 149 48.3
Sed0012268 Sechium edule HOM05D005482 ORTHO05D006502 1.4e-17 93.6 165 43.6
MD15G1310400 Malus domestica HOM05D005482 ORTHO05D006502 2.4e-17 92.8 170 42.9
Thecc.01G089100 Theobroma cacao HOM05D005482 ORTHO05D006502 2.4e-17 92.8 162 44.4
Eucgr.H02447 Eucalyptus grandis HOM05D005482 ORTHO05D006502 6.9e-17 91.3 150 46.0
Gorai.008G093000 Gossypium raimondii HOM05D005482 ORTHO05D006502 9.0e-17 90.9 163 46.0
Gohir.A12G084900 Gossypium hirsutum HOM05D005482 ORTHO05D006502 1.2e-16 90.5 163 46.0
Gohir.D12G079700 Gossypium hirsutum HOM05D005482 ORTHO05D006502 1.2e-16 90.5 163 46.0
TWI74G1080 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 2.0e-16 89.7 163 42.9
Potri.007G011800 Populus trichocarpa HOM05D005482 ORTHO05D006502 4.5e-16 88.6 163 42.3
Rhsim08G0017200 Rhododendron simsii HOM05D005482 ORTHO05D006502 5.9e-16 88.2 151 47.7
TWI77G0993 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 7.6e-16 87.8 141 43.3
EL10Ac6g15187 Beta vulgaris HOM05D005482 ORTHO05D006502 1.0e-15 87.4 128 46.9
Duzib264G1263 Durio zibethinus HOM05D005482 ORTHO05D006502 1.7e-15 86.7 166 44.6
Thhalv10003865m.g Eutrema salsugineum HOM05D005482 ORTHO05D006502 1.7e-15 86.7 134 46.3
CsaV3_6G044940 Cucumis sativus L. HOM05D005482 ORTHO05D006502 2.9e-15 85.9 124 47.6
Psat3g169840 Pisum sativum HOM05D005482 ORTHO05D006502 2.9e-15 85.9 146 47.3
Cfa006872 Carpinus fangiana HOM05D005482 ORTHO05D006502 1.1e-14 84.0 150 42.7
Lalb_Chr16g0381591 Lupinus albus HOM05D005482 ORTHO05D006502 1.1e-14 84.0 147 42.2
CANSAT01G3178 Cannabis sativa HOM05D005482 ORTHO05D006502 1.4e-14 83.6 129 48.1
Haze_03890 Corylus avellana HOM05D005482 ORTHO05D006502 1.4e-14 83.6 152 41.4
Cc07_g13970 Coffea canephora HOM05D005482 ORTHO05D006502 1.9e-14 83.2 166 41.0
FAN28G0477 Fragaria x ananassa HOM05D005482 ORTHO05D006502 1.9e-14 83.2 141 43.3
COL.COLO4_27370 Corchorus olitorius HOM05D005482 ORTHO05D006502 9.3e-14 80.9 165 42.4
Prupe.6G203300 Prunus persica HOM05D005482 ORTHO05D006502 9.3e-14 80.9 165 40.0
Aa31LG3G16620 Aethionema arabicum HOM05D005482 ORTHO05D006502 1.2e-13 80.5 146 43.8
CAN.G581.10 Capsicum annuum HOM05D005482 ORTHO05D006502 1.6e-13 80.1 146 43.8
AL8G43140 Arabidopsis lyrata HOM05D005482 ORTHO05D006502 2.1e-13 79.7 132 45.5
Sp2g28640 Schrenkiella parvula HOM05D005482 ORTHO05D006502 2.1e-13 79.7 123 46.3
AT5G65540 Arabidopsis thaliana HOM05D005482 ORTHO05D006502 2.7e-13 79.3 133 44.4
CiPaw.08G141000 Carya illinoinensis HOM05D005482 ORTHO05D006502 2.7e-13 79.3 153 41.2
FvH4_1g19490 Fragaria vesca HOM05D005482 ORTHO05D006502 2.7e-13 79.3 171 38.6
FAN19G3176 Fragaria x ananassa HOM05D005482 ORTHO05D006502 2.7e-13 79.3 171 38.6
Carub.0008s2640 Capsella rubella HOM05D005482 ORTHO05D006502 4.6e-13 78.6 122 45.1
CARHR279520 Cardamine hirsuta HOM05D005482 ORTHO05D006502 1.4e-12 77.0 122 44.3
FAN23G0007 Fragaria x ananassa HOM05D005482 ORTHO05D006502 1.4e-12 77.0 156 39.1
Ca_25228_v3 Cicer arietinum L. HOM05D005482 ORTHO05D006502 1.8e-12 76.6 148 41.9
ClCG01G018310 Citrullus lanatus HOM05D005482 ORTHO05D006502 3.0e-12 75.9 123 44.7
VMungo1215G0139 Vigna mungo HOM05D005482 ORTHO05D006502 3.0e-12 75.9 138 39.9
C03p60440 Brassica napus HOM05D005482 ORTHO05D006502 6.7e-12 74.7 137 42.3
BolC3t18305H Brassica oleracea HOM05D005482 ORTHO05D006502 6.7e-12 74.7 137 42.3
arahy.Tifrunner.gnm1.ann1.52LQAS Arachis hypogaea HOM05D005482 ORTHO05D006502 8.8e-12 74.3 125 44.0
arahy.Tifrunner.gnm1.ann1.HVQN9F Arachis hypogaea HOM05D005482 ORTHO05D006502 8.8e-12 74.3 125 44.0
Nitab4.5_0000128g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 8.8e-12 74.3 171 39.2
Ah.03g139850 Amaranthus hybridus HOM05D005482 ORTHO05D006502 1.1e-11 73.9 160 41.2
PSO170G0154 Papaver somniferum HOM05D005482 ORTHO05D006502 2.5e-11 72.8 128 40.6
PSO210G6830 Papaver somniferum HOM05D005482 ORTHO05D006502 2.5e-11 72.8 182 35.7
Nitab4.5_0007769g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 4.3e-11 72.0 150 40.7
Phvul.002G145800 Phaseolus vulgaris HOM05D005482 ORTHO05D006502 5.7e-11 71.6 126 40.5
Oeu017110.1 Olea europaea HOM05D005482 ORTHO05D006502 7.4e-11 71.2 133 40.6
PGSC0003DMG400014586 Solanum tuberosum HOM05D005482 ORTHO05D006502 9.7e-11 70.9 132 42.4
DCAR_003442 Daucus carota HOM05D005482 ORTHO05D006502 1.7e-10 70.1 172 38.4
Cpa.g.sc55.13 Carica papaya HOM05D005482 ORTHO05D006502 2.8e-10 69.3 137 38.0
AUR62017985 Chenopodium quinoa HOM05D005482 ORTHO05D006502 2.8e-10 69.3 128 40.6
Lj2g0006088 Lotus japonicus HOM05D005482 ORTHO05D006502 3.7e-10 68.9 122 41.8
Medtr5g031750 Medicago truncatula HOM05D005482 ORTHO05D006502 3.7e-10 68.9 116 46.6
Solyc05g051370.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 3.7e-10 68.9 132 41.7
Sopen05g029760 Solanum pennellii HOM05D005482 ORTHO05D006502 3.7e-10 68.9 132 41.7
ECA246G4867 Erigeron canadensis HOM05D005482 ORTHO05D006502 4.8e-10 68.6 128 45.3
THA.LOC104798625 Tarenaya hassleriana HOM05D005482 ORTHO05D006502 6.3e-10 68.2 147 40.1
Ciclev10025202m.g Citrus clementina HOM05D005482 ORTHO05D006502 1.4e-09 67.0 149 40.3
Peaxi162Scf01142g00001 Petunia axillaris HOM05D005482 ORTHO05D006502 1.8e-09 66.6 164 39.6
Atru.chr3.678 Acer truncatum HOM05D005482 ORTHO05D006502 3.1e-09 65.9 146 38.4
Atru.chr3.724 Acer truncatum HOM05D005482 ORTHO05D006502 3.1e-09 65.9 146 38.4
A06p32390 Brassica napus HOM05D005482 ORTHO05D006502 3.1e-09 65.9 139 36.7
ATR0767G001 Amborella trichopoda HOM05D005482 ORTHO05D006502 4.1e-09 65.5 155 36.8
BraA06t26164Z Brassica rapa HOM05D005482 ORTHO05D006502 4.1e-09 65.5 139 36.7
Glyma.01G021600 Glycine max HOM05D005482 ORTHO05D006502 6.9e-09 64.7 118 39.8
Glyma.09G200000 Glycine max HOM05D005482 ORTHO05D006502 6.9e-09 64.7 114 41.2
TAR381G1343 Trochodendron aralioides HOM05D005482 ORTHO05D006502 6.9e-09 64.7 108 44.4
MSTRG.23386 Avicennia marina HOM05D005482 ORTHO05D006502 1.5e-08 63.5 149 39.6
PGR102G1704 Punica granatum HOM05D005482 ORTHO05D006502 1.5e-08 63.5 153 38.6
Hund16521 Selenicereus undatus HOM05D005482 ORTHO05D006502 2.0e-08 63.2 157 35.0
Sabra07G0009200 Salix brachista HOM05D005482 ORTHO05D006502 1.0e-07 60.8 168 35.7
Oeu042113.2 Olea europaea HOM05D005482 ORTHO05D006502 3.8e-07 58.9 95 46.3
HanXRQChr12g0368991 Helianthus annuus HOM05D005482 ORTHO05D006502 5.0e-07 58.5 198 35.4
BcaC01g02786 Brassica carinata HOM05D005482 ORTHO05D006502 3.2e-06 55.8 137 37.2
SalBow3G1020 Salvia bowleyana HOM05D005482 ORTHO05D006502 9.4e-06 54.3 105 41.9


User provided reference genes

Program Settings