Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1541 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 1.5e-147 526.2 276 100.0
CDE04G2914 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 4.0e-79 298.9 199 82.4
Nn2g10682 Nelumbo nucifera HOM05D005177 ORTHO05D006175 7.4e-57 224.9 225 57.8
TAR636G0661 Trochodendron aralioides HOM05D005177 ORTHO05D006175 1.7e-53 213.8 228 56.6
Sopen11g030050 Solanum pennellii HOM05D005177 ORTHO05D006175 3.2e-52 209.5 246 53.7
Gohir.D02G184700 Gossypium hirsutum HOM05D005177 ORTHO05D006175 9.3e-52 208.0 239 51.5
Gorai.005G207000 Gossypium raimondii HOM05D005177 ORTHO05D006175 9.3e-52 208.0 239 51.5
Nitab4.5_0001802g0050 Nicotiana tabacum HOM05D005177 ORTHO05D006175 4.6e-51 205.7 241 53.1
Peaxi162Scf00389g00939 Petunia axillaris HOM05D005177 ORTHO05D006175 7.9e-51 204.9 264 48.9
Duzib168G0988 Durio zibethinus HOM05D005177 ORTHO05D006175 1.0e-50 204.5 243 50.6
Gohir.A03G161400 Gossypium hirsutum HOM05D005177 ORTHO05D006175 1.0e-50 204.5 239 50.6
Solyc11g072400.3 Solanum lycopersicum HOM05D005177 ORTHO05D006175 1.0e-50 204.5 223 56.1
Nitab4.5_0002129g0070 Nicotiana tabacum HOM05D005177 ORTHO05D006175 1.3e-50 204.1 239 52.3
PGSC0003DMG400027405 Solanum tuberosum HOM05D005177 ORTHO05D006175 3.0e-50 203.0 224 54.0
Dinv32787 Davidia involucrata HOM05D005177 ORTHO05D006175 6.7e-50 201.8 228 52.6
PSO063G2407 Papaver somniferum HOM05D005177 ORTHO05D006175 1.5e-49 200.7 220 52.3
PSO339G4756 Papaver somniferum HOM05D005177 ORTHO05D006175 1.5e-49 200.7 219 52.5
MSTRG.18639 Avicennia marina HOM05D005177 ORTHO05D006175 2.5e-49 199.9 264 50.4
HPP92_013896 Vanilla planifolia HOM05D005177 ORTHO05D006175 3.3e-49 199.5 213 51.2
COL.COLO4_25245 Corchorus olitorius HOM05D005177 ORTHO05D006175 4.3e-49 199.1 243 52.3
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 7.4e-49 198.4 227 51.1
Duzib170G1166 Durio zibethinus HOM05D005177 ORTHO05D006175 1.6e-48 197.2 225 53.3
CiPaw.13G107500 Carya illinoinensis HOM05D005177 ORTHO05D006175 2.2e-48 196.8 218 53.2
SGA_v2.0_scaffold97G29176 Striga asiatica HOM05D005177 ORTHO05D006175 3.7e-48 196.1 254 48.4
Cpa.g.sc139.70 Carica papaya HOM05D005177 ORTHO05D006175 1.8e-47 193.7 231 52.4
TWI31G0237 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 2.4e-47 193.4 237 51.5
TWI79G0119 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 2.4e-47 193.4 233 51.1
QL01p037260 Quercus lobata HOM05D005177 ORTHO05D006175 4.1e-47 192.6 232 52.6
EL10Ac9g22467 Beta vulgaris HOM05D005177 ORTHO05D006175 5.3e-47 192.2 214 52.3
Aqoxy4G03211 Aquilegia oxysepala HOM05D005177 ORTHO05D006175 6.9e-47 191.8 239 47.7
Oeu005908.1 Olea europaea HOM05D005177 ORTHO05D006175 6.9e-47 191.8 230 49.6
GSVIVG01025137001 Vitis vinifera HOM05D005177 ORTHO05D006175 6.9e-47 191.8 218 53.7
Manes.11G141500 Manihot esculenta HOM05D005177 ORTHO05D006175 9.0e-47 191.4 219 50.7
Cfa011363 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.2e-46 191.0 225 52.0
PGR102G1116 Punica granatum HOM05D005177 ORTHO05D006175 1.2e-46 191.0 218 51.8
Atru.chr3.3689 Acer truncatum HOM05D005177 ORTHO05D006175 2.6e-46 189.9 259 47.9
Dinv14445 Davidia involucrata HOM05D005177 ORTHO05D006175 2.6e-46 189.9 250 47.2
Prupe.6G094900 Prunus persica HOM05D005177 ORTHO05D006175 4.5e-46 189.1 244 50.8
AUR62006522 Chenopodium quinoa HOM05D005177 ORTHO05D006175 2.2e-45 186.8 218 50.9
Migut.D02184 Erythranthe guttata HOM05D005177 ORTHO05D006175 2.2e-45 186.8 234 48.7
vmacro14462 Vaccinium macrocarpon HOM05D005177 ORTHO05D006175 5.0e-45 185.7 243 48.1
VMungo1127G2232 Vigna mungo HOM05D005177 ORTHO05D006175 5.0e-45 185.7 220 49.1
Zm00001eb265420 Zea mays HOM05D005177 ORTHO05D006175 8.5e-45 184.9 236 46.6
unitig_899.g14907 Utricularia gibba HOM05D005177 ORTHO05D006175 3.2e-44 183.0 237 48.5
Thecc.09G260100 Theobroma cacao HOM05D005177 ORTHO05D006175 5.5e-44 182.2 218 50.9
Glyma.11G153378 Glycine max HOM05D005177 ORTHO05D006175 9.4e-44 181.4 222 47.3
Ciclev10028554m.g Citrus clementina HOM05D005177 ORTHO05D006175 1.2e-43 181.0 218 51.4
Phvul.011G072700 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 1.2e-43 181.0 229 48.0
Psat0s137g0200 Pisum sativum HOM05D005177 ORTHO05D006175 2.7e-43 179.9 226 47.8
RcHm_v2.0_Chr5g0060611 Rosa chinensis HOM05D005177 ORTHO05D006175 3.6e-43 179.5 220 50.0
Ah.01g015010 Amaranthus hybridus HOM05D005177 ORTHO05D006175 1.0e-42 177.9 255 47.1
MD03G1105200 Malus domestica HOM05D005177 ORTHO05D006175 1.0e-42 177.9 228 50.9
Lalb_Chr03g0027131 Lupinus albus HOM05D005177 ORTHO05D006175 1.4e-42 177.6 226 46.9
Cc01_g11530 Coffea canephora HOM05D005177 ORTHO05D006175 6.7e-42 175.3 223 50.2
QL01p037225 Quercus lobata HOM05D005177 ORTHO05D006175 6.7e-42 175.3 284 42.3
Os05g0123300 Oryza sativa ssp. japonica HOM05D005177 ORTHO05D006175 8.8e-42 174.9 227 45.4
CiPaw.13G107400 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.5e-41 174.1 216 48.6
ATR1159G017 Amborella trichopoda HOM05D005177 ORTHO05D006175 7.4e-41 171.8 245 44.1
CANSAT54G2759 Cannabis sativa HOM05D005177 ORTHO05D006175 9.7e-41 171.4 224 49.6
MELO3C025749.2 Cucumis melo HOM05D005177 ORTHO05D006175 1.3e-40 171.0 240 46.7
Lalb_Chr01g0004161 Lupinus albus HOM05D005177 ORTHO05D006175 1.3e-40 171.0 207 49.8
Hund08273 Selenicereus undatus HOM05D005177 ORTHO05D006175 2.2e-40 170.2 247 44.9
THA.LOC104814837 Tarenaya hassleriana HOM05D005177 ORTHO05D006175 2.8e-40 169.9 211 47.4
CAN.G553.3 Capsicum annuum HOM05D005177 ORTHO05D006175 3.7e-40 169.5 129 65.1
Dinv01415 Davidia involucrata HOM05D005177 ORTHO05D006175 3.7e-40 169.5 153 57.5
FvH4_3g33260 Fragaria vesca HOM05D005177 ORTHO05D006175 4.8e-40 169.1 214 46.3
Lj3g0023073 Lotus japonicus HOM05D005177 ORTHO05D006175 6.3e-40 168.7 235 46.0
Rhsim01G0220100 Rhododendron simsii HOM05D005177 ORTHO05D006175 1.4e-39 167.5 208 48.6
SMO143G0224 Selaginella moellendorffii HOM05D005177 ORTHO05D006175 1.4e-39 167.5 212 46.7
TPR.G14917 Trifolium pratense HOM05D005177 ORTHO05D006175 1.8e-39 167.2 237 43.9
Haze_23911 Corylus avellana HOM05D005177 ORTHO05D006175 6.9e-39 165.2 224 48.2
Carub.0008s2107 Capsella rubella HOM05D005177 ORTHO05D006175 1.2e-38 164.5 237 43.9
Aa31LG1G12430 Aethionema arabicum HOM05D005177 ORTHO05D006175 1.5e-38 164.1 237 43.9
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.5e-38 164.1 242 44.2
CsaV3_6G021650 Cucumis sativus L. HOM05D005177 ORTHO05D006175 1.5e-38 164.1 232 43.5
Mapoly0004s0234 Marchantia polymorpha HOM05D005177 ORTHO05D006175 2.0e-38 163.7 159 52.2
BcaC03g13978 Brassica carinata HOM05D005177 ORTHO05D006175 1.3e-37 161.0 232 42.2
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 1.3e-37 161.0 239 43.1
BcaB05g22637 Brassica carinata HOM05D000280 ORTHO05D000632 2.9e-37 159.8 232 42.2
BraA02t05734Z Brassica rapa HOM05D005177 ORTHO05D006175 2.9e-37 159.8 213 45.1
Lsat_1_v5_gn_2_50980 Lactuca sativa HOM05D005177 ORTHO05D006175 2.9e-37 159.8 239 45.6
BolC2t07273H Brassica oleracea HOM05D005177 ORTHO05D006175 3.8e-37 159.5 213 43.7
Sp6g21970 Schrenkiella parvula HOM05D005177 ORTHO05D006175 3.8e-37 159.5 213 47.4
ClCG02G020960 Citrullus lanatus HOM05D005177 ORTHO05D006175 8.5e-37 158.3 248 43.5
Medtr4g060790 Medicago truncatula HOM05D005177 ORTHO05D006175 8.5e-37 158.3 229 43.7
Eucgr.B02471 Eucalyptus grandis HOM05D005177 ORTHO05D006175 1.1e-36 157.9 223 44.4
CARHR274040 Cardamine hirsuta HOM05D005177 ORTHO05D006175 2.5e-36 156.8 217 44.2
HanXRQChr14g0433031 Helianthus annuus HOM05D005177 ORTHO05D006175 3.2e-36 156.4 216 45.8
AT5G60370 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 4.2e-36 156.0 222 43.7
Thhalv10013696m.g Eutrema salsugineum HOM05D005177 ORTHO05D006175 7.2e-36 155.2 237 43.9
AL8G36980 Arabidopsis lyrata HOM05D005177 ORTHO05D006175 1.2e-35 154.5 240 39.6
arahy.Tifrunner.gnm1.ann1.X56S8K Arachis hypogaea HOM05D005177 ORTHO05D006175 1.2e-35 154.5 253 39.9
ECA238G1817 Erigeron canadensis HOM05D000382 ORTHO05D000391 1.2e-35 154.5 212 43.9
arahy.Tifrunner.gnm1.ann1.Q9R44R Arachis hypogaea HOM05D005177 ORTHO05D006175 2.7e-35 153.3 247 39.7
RcHm_v2.0_Chr5g0060621 Rosa chinensis HOM05D005177 ORTHO05D006175 1.0e-34 151.4 218 43.1
Haze_23912 Corylus avellana HOM05D005177 ORTHO05D006175 5.1e-34 149.1 218 45.4
Pp3c24_6040 Physcomitrium patens HOM05D005177 ORTHO05D006175 5.1e-34 149.1 120 60.8
DCAR_006046 Daucus carota HOM05D005177 ORTHO05D006175 1.5e-33 147.5 201 45.8
Psat6g221840 Pisum sativum HOM05D005177 ORTHO05D006175 2.0e-33 147.1 249 41.8
CDE07G0204 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 2.6e-33 146.7 91 81.3
SHI06048 Sapria himalayana HOM05D005177 ORTHO05D006175 2.6e-33 146.7 210 41.4
CiPaw.13G107200 Carya illinoinensis HOM05D005177 ORTHO05D006175 2.2e-32 143.7 242 43.8
Ca_11098_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 2.2e-32 143.7 248 42.7
Sc06g0010530 Simmondsia chinensis HOM05D005177 ORTHO05D006175 8.2e-32 141.7 206 46.6
Phvul.007G036300 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 4.1e-31 139.4 221 42.1
Medtr1g062090 Medicago truncatula HOM05D005177 ORTHO05D006175 2.0e-30 137.1 221 43.9
VMungo0251G1016 Vigna mungo HOM05D005177 ORTHO05D006175 7.2e-28 128.6 236 38.6
CBR_g2921 Chara braunii HOM05D005177 ORTHO05D006175 9.4e-28 128.3 124 50.0
Lj3g0021588 Lotus japonicus HOM05D005177 ORTHO05D006175 4.7e-27 125.9 235 40.4
CiPaw.13G107600 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.0e-26 124.8 103 59.2
Lalb_Chr06g0165641 Lupinus albus HOM05D005177 ORTHO05D006175 6.7e-26 122.1 207 41.5
Aqoxy230s004 Aquilegia oxysepala HOM05D000156 ORTHO05D002600 8.8e-26 121.7 117 53.0
PSO339G4079 Papaver somniferum HOM05D005177 ORTHO05D006175 2.2e-24 117.1 121 52.1
Glyma.20G125100 Glycine max HOM05D005177 ORTHO05D006175 6.3e-24 115.5 169 41.4
QL01p037240 Quercus lobata HOM05D005177 ORTHO05D006175 6.3e-24 115.5 138 47.1
Lj5g0027081 Lotus japonicus HOM05D005177 ORTHO05D006175 1.1e-23 114.8 230 36.5
TPR.G4931 Trifolium pratense HOM05D005177 ORTHO05D006175 1.1e-23 114.8 245 37.6
PSO384G3506 Papaver somniferum HOM05D005177 ORTHO05D006175 1.8e-23 114.0 118 51.7
FAN21G0634 Fragaria x ananassa HOM05D005177 ORTHO05D006175 3.1e-23 113.2 218 38.1
Haze_23910 Corylus avellana HOM05D005177 ORTHO05D006175 1.0e-21 108.2 224 38.4
SEGI_18444 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 1.1e-20 104.8 77 63.6
C02p11760 Brassica napus HOM05D005177 ORTHO05D006175 6.1e-19 99.0 101 48.5
CSS0008980 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D006175 8.8e-18 95.1 75 61.3
Lj2A1035T47 Lonicera japonica HOM05D005177 ORTHO05D006175 9.7e-17 91.7 152 43.4
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 2.0e-14 84.0 93 50.5


User provided reference genes

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