Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1517 Ceratophyllum demersum HOM05D005231 ORTHO05D006387 0.0e+00 1260.0 657 100.0
GSVIVG01001825001 Vitis vinifera HOM05D005231 ORTHO05D006387 3.5e-307 1057.7 649 83.7
Aqoxy5G03496 Aquilegia oxysepala HOM05D005231 ORTHO05D006387 7.8e-307 1056.6 662 80.8
TAR371G0773 Trochodendron aralioides HOM05D005231 ORTHO05D006387 6.6e-306 1053.5 660 82.4
Dinv25680 Davidia involucrata HOM05D005231 ORTHO05D006387 2.5e-305 1051.6 654 83.5
Haze_14831 Corylus avellana HOM05D005231 ORTHO05D006387 9.6e-305 1049.7 660 82.3
Glyma.19G086600 Glycine max HOM05D005231 ORTHO05D006387 2.8e-304 1048.1 651 82.3
Thecc.04G029800 Theobroma cacao HOM05D005231 ORTHO05D006387 6.2e-304 1047.0 650 83.1
Cfa007256 Carpinus fangiana HOM05D005231 ORTHO05D006387 9.0e-303 1043.1 659 82.1
CiPaw.03G052100 Carya illinoinensis HOM05D005231 ORTHO05D006387 2.0e-302 1042.0 660 81.4
Hma1.2p1_0571F.1_g180760 Hydrangea macrophylla HOM05D005231 ORTHO05D006387 9.9e-302 1039.6 648 82.4
Ca_26723_v3 Cicer arietinum L. HOM05D005231 ORTHO05D006387 1.7e-301 1038.9 651 79.0
Lalb_Chr14g0363091 Lupinus albus HOM05D005231 ORTHO05D006387 1.7e-301 1038.9 653 81.9
Psat3g170000 Pisum sativum HOM05D005231 ORTHO05D006387 4.9e-301 1037.3 648 81.8
TPR.G38280 Trifolium pratense HOM05D005231 ORTHO05D006387 8.4e-301 1036.6 648 80.6
Phvul.001G096100 Phaseolus vulgaris HOM05D005231 ORTHO05D006387 1.9e-300 1035.4 651 79.1
Duzib147G1087 Durio zibethinus HOM05D005231 ORTHO05D006387 2.4e-300 1035.0 656 82.2
QL02p072461 Quercus lobata HOM05D005231 ORTHO05D006387 4.2e-300 1034.2 653 81.0
Lj7A607T31 Lonicera japonica HOM05D005231 ORTHO05D006387 9.3e-300 1033.1 654 81.3
COL.COLO4_08767 Corchorus olitorius HOM05D005231 ORTHO05D006387 3.5e-299 1031.2 656 81.4
Duzib264G1000 Durio zibethinus HOM05D005231 ORTHO05D006387 3.5e-299 1031.2 658 81.9
Lj1g0000655 Lotus japonicus HOM05D005231 ORTHO05D006387 6.0e-299 1030.4 648 81.8
Atru.chr6.2511 Acer truncatum HOM05D005231 ORTHO05D006387 7.9e-299 1030.0 653 81.8
CiPaw.04G034400 Carya illinoinensis HOM05D005231 ORTHO05D006387 1.0e-298 1029.6 661 81.4
Prupe.5G183000 Prunus persica HOM05D005231 ORTHO05D006387 1.7e-298 1028.9 661 80.0
TWI36G1540 Tripterygium wilfordii HOM05D005231 ORTHO05D006387 1.7e-298 1028.9 661 80.0
Medtr7g031450 Medicago truncatula HOM05D005231 ORTHO05D006387 3.9e-298 1027.7 651 81.3
VMungo1215G0650 Vigna mungo HOM05D005231 ORTHO05D006387 3.9e-298 1027.7 651 79.4
ClCG05G007180 Citrullus lanatus HOM05D005231 ORTHO05D006387 5.1e-298 1027.3 652 81.0
Nn2g10551 Nelumbo nucifera HOM05D005231 ORTHO05D006387 5.1e-298 1027.3 654 80.6
MD06G1184100 Malus domestica HOM05D005231 ORTHO05D006387 6.6e-298 1026.9 660 80.5
Eucgr.I01665 Eucalyptus grandis HOM05D005231 ORTHO05D006387 2.5e-297 1025.0 662 81.0
Ciclev10014086m.g Citrus clementina HOM05D005231 ORTHO05D006387 3.3e-297 1024.6 652 82.1
PSO063G5961 Papaver somniferum HOM05D005231 ORTHO05D006387 5.6e-297 1023.8 672 80.1
TWI12G0663 Tripterygium wilfordii HOM05D005231 ORTHO05D006387 5.6e-297 1023.8 663 80.4
PSO782G5010 Papaver somniferum HOM05D005231 ORTHO05D006387 7.4e-297 1023.5 669 80.4
Glyma.16G060500 Glycine max HOM05D005231 ORTHO05D006387 9.6e-297 1023.1 652 80.8
Gorai.006G039900 Gossypium raimondii HOM05D005231 ORTHO05D006387 3.6e-296 1021.1 660 80.3
Actinidia30894 Actinidia chinensis HOM05D005231 ORTHO05D006387 6.2e-296 1020.4 656 79.9
Sed0020589 Sechium edule HOM05D005231 ORTHO05D006387 8.1e-296 1020.0 653 81.9
Gohir.A09G034100 Gossypium hirsutum HOM05D005231 ORTHO05D006387 2.4e-295 1018.5 660 80.6
Gohir.D09G035000 Gossypium hirsutum HOM05D005231 ORTHO05D006387 4.0e-295 1017.7 658 79.8
CANSAT64G0673 Cannabis sativa HOM05D005231 ORTHO05D006387 9.0e-295 1016.5 661 80.2
Nn4g22395 Nelumbo nucifera HOM05D005231 ORTHO05D006387 1.5e-294 1015.8 587 84.0
arahy.Tifrunner.gnm1.ann1.L2Q6WP Arachis hypogaea HOM05D005231 ORTHO05D006387 2.0e-294 1015.4 651 80.2
RcHm_v2.0_Chr7g0180111 Rosa chinensis HOM05D005231 ORTHO05D006387 3.4e-294 1014.6 659 80.1
Cc07_g00560 Coffea canephora HOM05D005231 ORTHO05D006387 4.5e-294 1014.2 653 79.3
Manes.17G106200 Manihot esculenta HOM05D005231 ORTHO05D006387 5.8e-294 1013.8 648 77.9
Nitab4.5_0006008g0040 Nicotiana tabacum HOM05D005231 ORTHO05D006387 9.9e-294 1013.1 652 79.8
arahy.Tifrunner.gnm1.ann1.M0JNNK Arachis hypogaea HOM05D005231 ORTHO05D006387 3.8e-293 1011.1 662 79.0
Nitab4.5_0000731g0120 Nicotiana tabacum HOM05D005231 ORTHO05D006387 3.8e-293 1011.1 653 79.5
Solyc11g068640.2 Solanum lycopersicum HOM05D005231 ORTHO05D006387 4.9e-293 1010.7 653 79.3
Sopen11g027360 Solanum pennellii HOM05D005231 ORTHO05D006387 4.9e-293 1010.7 653 79.3
Migut.K01445 Erythranthe guttata HOM05D005231 ORTHO05D006387 3.2e-292 1008.1 656 80.2
Potri.001G334300 Populus trichocarpa HOM05D005231 ORTHO05D006387 4.2e-292 1007.7 656 79.7
ATR0693G284 Amborella trichopoda HOM05D005231 ORTHO05D006387 5.5e-292 1007.3 649 79.5
CAN.G745.7 Capsicum annuum HOM05D005231 ORTHO05D006387 9.3e-292 1006.5 652 79.6
PGR142G3743 Punica granatum HOM05D005231 ORTHO05D006387 2.1e-291 1005.4 691 76.8
DCAR_021762 Daucus carota HOM05D005231 ORTHO05D006387 4.6e-291 1004.2 655 78.5
FAN08G2159 Fragaria x ananassa HOM05D005231 ORTHO05D006387 6.0e-291 1003.8 657 79.6
FvH4_5g15940 Fragaria vesca HOM05D005231 ORTHO05D006387 2.3e-290 1001.9 659 79.5
FAN04G1242 Fragaria x ananassa HOM05D005231 ORTHO05D006387 3.0e-290 1001.5 662 78.7
FAN18G1846 Fragaria x ananassa HOM05D005231 ORTHO05D006387 3.9e-290 1001.1 659 79.4
MSTRG.3095 Avicennia marina HOM05D005231 ORTHO05D006387 8.7e-290 1000.0 660 78.2
Sabra16G0215400 Salix brachista HOM05D005231 ORTHO05D006387 1.1e-289 999.6 656 77.9
Hund15390 Selenicereus undatus HOM05D005231 ORTHO05D006387 5.6e-289 997.3 657 79.6
Aa31LG5G10910 Aethionema arabicum HOM05D005231 ORTHO05D006387 7.4e-289 996.9 668 78.1
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 1.3e-288 996.1 691 76.4
Peaxi162Scf00224g00118 Petunia axillaris HOM05D005231 ORTHO05D006387 6.2e-288 993.8 698 74.1
Rhsim08G0045200 Rhododendron simsii HOM05D005231 ORTHO05D006387 1.5e-286 989.2 696 75.6
Thhalv10019930m.g Eutrema salsugineum HOM05D005231 ORTHO05D006387 2.9e-285 984.9 670 77.2
ECA238G4317 Erigeron canadensis HOM05D005231 ORTHO05D006387 4.9e-285 984.2 654 76.3
CSS0002510 Camellia sinensis var. sinensis HOM05D005231 ORTHO05D006387 1.9e-284 982.2 653 79.9
Sp3g00280 Schrenkiella parvula HOM05D005231 ORTHO05D006387 1.9e-284 982.2 657 78.2
A02p30380 Brassica napus HOM05D005231 ORTHO05D006387 2.5e-284 981.9 661 77.8
Carub.0003s0028 Capsella rubella HOM05D005231 ORTHO05D006387 4.2e-284 981.1 667 77.2
Ah.01g004700 Amaranthus hybridus HOM05D005231 ORTHO05D006387 5.5e-284 980.7 659 78.0
AL3G10350 Arabidopsis lyrata HOM05D005231 ORTHO05D006387 5.5e-284 980.7 673 76.5
AT3G01780 Arabidopsis thaliana HOM05D005231 ORTHO05D006387 5.5e-284 980.7 673 76.5
C02p47900 Brassica napus HOM05D005231 ORTHO05D006387 7.1e-284 980.3 665 77.4
BolC2t10823H Brassica oleracea HOM05D005231 ORTHO05D006387 7.1e-284 980.3 665 77.4
Sc03g0006820 Simmondsia chinensis HOM05D005231 ORTHO05D006387 1.6e-283 979.2 664 77.1
HanXRQChr14g0450911 Helianthus annuus HOM05D005231 ORTHO05D006387 2.7e-283 978.4 650 77.4
BraA02t08053Z Brassica rapa HOM05D005231 ORTHO05D006387 1.3e-282 976.1 661 77.5
CARHR075150 Cardamine hirsuta HOM05D005231 ORTHO05D006387 3.0e-282 974.9 684 75.1
Lsat_1_v5_gn_2_93920 Lactuca sativa HOM05D005231 ORTHO05D006387 3.0e-282 974.9 656 76.8
SalBow1G7136 Salvia bowleyana HOM05D005231 ORTHO05D006387 2.5e-281 971.8 584 80.7
THA.LOC104822412 Tarenaya hassleriana HOM05D005231 ORTHO05D006387 5.7e-281 970.7 669 76.4
Os11g0175900 Oryza sativa ssp. japonica HOM05D005231 ORTHO05D006387 7.4e-281 970.3 659 75.0
Os02g0793100 Oryza sativa ssp. japonica HOM05D005231 ORTHO05D006387 9.6e-281 969.9 659 75.0
unitig_21.g20479 Utricularia gibba HOM05D005231 ORTHO05D006387 6.3e-280 967.2 648 73.6
Zm00001eb201030 Zea mays HOM05D005231 ORTHO05D006387 2.0e-278 962.2 660 74.5
SGA_v2.0_scaffold47G17578 Striga asiatica HOM05D005231 ORTHO05D006387 1.0e-277 959.9 584 80.1
BcaC03g16893 Brassica carinata HOM05D005231 ORTHO05D006387 5.5e-276 954.1 584 79.5
SEGI_09869 Sequoiadendron giganteum HOM05D005231 ORTHO05D006387 5.5e-276 954.1 647 75.0
EL10Ac6g14067 Beta vulgaris HOM05D005231 ORTHO05D006387 1.8e-274 949.1 666 75.5
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 4.8e-272 941.0 663 73.0
SHI03892 Sapria himalayana HOM05D005231 ORTHO05D006387 8.8e-266 920.2 656 69.5
AUR62014230 Chenopodium quinoa HOM05D005231 ORTHO05D006387 3.9e-258 894.8 644 70.0
CsaV3_3G015940 Cucumis sativus L. HOM05D005231 ORTHO05D006387 2.6e-257 892.1 584 79.3
vmacro18325 Vaccinium macrocarpon HOM05D005231 ORTHO05D006387 2.6e-257 892.1 818 61.6
FAN13G1708 Fragaria x ananassa HOM05D005231 ORTHO05D006387 1.6e-254 882.9 658 72.8
SMO143G0109 Selaginella moellendorffii HOM05D005231 ORTHO05D006387 1.4e-234 816.6 654 62.1
AUR62038505 Chenopodium quinoa HOM05D005231 ORTHO05D006387 2.6e-233 812.4 527 75.5
AagrBONN_evm.TU.Sc2ySwM_344.3213 Anthoceros agrestis HOM05D005231 ORTHO05D006387 1.5e-220 770.0 656 57.8
Pp3c2_2820 Physcomitrium patens HOM05D005231 ORTHO05D006387 2.1e-219 766.1 649 60.7
Pp3c14_16610 Physcomitrium patens HOM05D005231 ORTHO05D006387 6.8e-218 761.1 648 59.9
Mapoly0078s0040 Marchantia polymorpha HOM05D005231 ORTHO05D006387 4.4e-217 758.4 648 60.2
Pp3c10_18980 Physcomitrium patens HOM05D005231 ORTHO05D006387 3.7e-216 755.4 651 61.0
Cpa.g.sc130.10 Carica papaya HOM05D005231 ORTHO05D006387 1.5e-201 706.8 647 63.8
BcaB01g00417 Brassica carinata HOM05D005231 ORTHO05D006387 2.0e-201 706.4 506 70.2
Oeu050427.1 Olea europaea HOM05D005231 ORTHO05D006387 7.6e-201 704.5 469 79.7
Dinv33367 Davidia involucrata HOM05D005231 ORTHO05D006387 7.6e-193 677.9 406 82.0
CBR_g21747 Chara braunii HOM05D005231 ORTHO05D006387 5.7e-164 582.0 652 45.6
MD14G1190000 Malus domestica HOM05D005231 ORTHO05D006387 3.4e-161 572.8 342 81.3
Manes.15G157900 Manihot esculenta HOM05D005231 ORTHO05D006387 5.9e-153 545.4 333 79.6
Zm00001eb091570 Zea mays HOM05D005231 ORTHO05D006387 7.4e-148 528.5 335 76.1
MBI11_g15863_MAGBIO Magnolia biondii HOM05D005231 ORTHO05D006387 1.1e-146 524.6 293 85.0
Aqoxy5G03474 Aquilegia oxysepala HOM05D005231 ORTHO05D006387 3.9e-141 506.1 346 78.3
HPP92_011387 Vanilla planifolia HOM05D005231 ORTHO05D006387 9.7e-140 501.5 292 82.5
AUR62014240 Chenopodium quinoa HOM05D005231 ORTHO05D006387 4.2e-135 486.1 435 60.2
Zm00001eb091580 Zea mays HOM05D005231 ORTHO05D006387 1.2e-102 378.3 278 70.9
Oeu050426.1 Olea europaea HOM05D005231 ORTHO05D006387 5.6e-87 326.2 190 82.6
Dinv33368 Davidia involucrata HOM05D005231 ORTHO05D006387 1.2e-68 265.4 168 77.4
BraA03t12406Z Brassica rapa HOM05D002210 ORTHO05D002304 1.8e-32 145.2 77 88.3
CSS0033455 Camellia sinensis var. sinensis HOM05D005231 ORTHO05D006387 8.8e-32 142.9 74 87.8
AUR62038506 Chenopodium quinoa HOM05D005231 ORTHO05D006387 4.4e-31 140.6 91 74.7
CsaV3_3G015930 Cucumis sativus L. HOM05D005231 ORTHO05D006387 6.1e-17 93.6 41 95.1
TAR626G1446 Trochodendron aralioides HOM05D000199 ORTHO05D015700 1.2e-12 79.3 51 76.5
TAR627G1114 Trochodendron aralioides HOM05D005231 ORTHO05D006387 1.2e-12 79.3 51 76.5
TAR365G0935 Trochodendron aralioides HOM05D000199 ORTHO05D015700 3.5e-12 77.8 51 72.5
C03p39410 Brassica napus HOM05D005231 ORTHO05D006387 2.9e-11 74.7 97 68.0
MCO15G368 Micromonas commoda HOM05D005231 ORTHO05D006387 3.7e-06 57.8 342 24.9


User provided reference genes

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