Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1503 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 1.2e-85 319.7 156 100.0
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 2.2e-29 132.9 145 49.7
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 2.6e-27 125.9 119 49.6
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 3.4e-27 125.6 122 50.0
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 7.7e-27 124.4 158 44.3
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 7.7e-27 124.4 122 49.2
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 1.3e-26 123.6 130 49.2
Hma1.2p1_0293F.1_g116170 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 1.7e-26 123.2 141 46.1
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 1.7e-26 123.2 157 43.9
Manes.10G091300 Manihot esculenta HOM05D005395 ORTHO05D006352 2.2e-26 122.9 146 47.3
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 2.2e-26 122.9 122 51.6
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 2.9e-26 122.5 133 47.4
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 5.0e-26 121.7 145 41.4
vmacro19894 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 5.0e-26 121.7 125 51.2
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 8.5e-26 120.9 144 45.1
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 1.4e-25 120.2 147 45.6
Thecc.10G136000 Theobroma cacao HOM05D005395 ORTHO05D006352 1.4e-25 120.2 146 46.6
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 1.4e-25 120.2 125 50.4
QL02p026227 Quercus lobata HOM05D005395 ORTHO05D006352 1.9e-25 119.8 122 48.4
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 1.9e-25 119.8 122 50.0
Atru.chr11.730 Acer truncatum HOM05D005395 ORTHO05D006352 5.5e-25 118.2 121 50.4
QL12p011919 Quercus lobata HOM05D005395 ORTHO05D006352 9.4e-25 117.5 122 48.4
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 1.6e-24 116.7 122 48.4
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 2.7e-24 115.9 140 40.7
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 3.6e-24 115.5 127 43.3
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 3.6e-24 115.5 143 45.5
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 7.9e-24 114.4 127 43.3
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 7.9e-24 114.4 115 47.8
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 7.9e-24 114.4 116 46.6
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 1.4e-23 113.6 122 50.0
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 1.4e-23 113.6 122 49.2
CsaV3_3G032200 Cucumis sativus L. HOM05D005395 ORTHO05D006352 2.3e-23 112.8 143 42.7
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 2.3e-23 112.8 139 43.2
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 2.3e-23 112.8 139 43.2
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 3.0e-23 112.5 139 43.2
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 6.7e-23 111.3 160 41.2
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 6.7e-23 111.3 139 42.4
Lalb_Chr13g0291141 Lupinus albus HOM05D005395 ORTHO05D006352 6.7e-23 111.3 109 47.7
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 8.8e-23 110.9 122 43.4
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 1.1e-22 110.5 143 42.0
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 1.1e-22 110.5 139 42.4
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 1.5e-22 110.2 111 46.8
Cpa.g.sc245.15 Carica papaya HOM05D005395 ORTHO05D006352 2.0e-22 109.8 136 47.8
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 2.6e-22 109.4 136 43.4
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 4.4e-22 108.6 122 44.3
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 5.7e-22 108.2 122 41.0
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 7.4e-22 107.8 122 45.1
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 7.4e-22 107.8 124 41.9
Sc04g0005700 Simmondsia chinensis HOM05D005395 ORTHO05D006352 9.7e-22 107.5 144 36.1
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 1.7e-21 106.7 122 43.4
ATR0681G222 Amborella trichopoda HOM05D005395 ORTHO05D006352 2.2e-21 106.3 116 47.4
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 2.2e-21 106.3 108 50.9
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 2.2e-21 106.3 113 47.8
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 2.8e-21 105.9 146 42.5
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 2.8e-21 105.9 113 45.1
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 3.7e-21 105.5 121 43.0
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 3.7e-21 105.5 119 45.4
Sopen01g034170 Solanum pennellii HOM05D005395 ORTHO05D006352 6.3e-21 104.8 136 41.2
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 1.1e-20 104.0 117 46.2
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 1.4e-20 103.6 134 41.0
Solyc01g087095.2 Solanum lycopersicum HOM05D005395 ORTHO05D006352 1.4e-20 103.6 132 42.4
SEGI_03843 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 1.8e-20 103.2 108 50.9
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 5.3e-20 101.7 147 38.1
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 1.2e-19 100.5 123 40.7
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 2.6e-19 99.4 160 35.6
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 2.6e-19 99.4 160 35.6
AUR62014136 Chenopodium quinoa HOM05D005395 ORTHO05D006352 3.5e-19 99.0 129 38.8
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 4.5e-19 98.6 129 38.0
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis HOM05D005395 ORTHO05D006352 7.7e-19 97.8 149 38.3
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 1.0e-18 97.4 110 40.9
SHI19147 Sapria himalayana HOM05D005395 ORTHO05D006352 2.2e-18 96.3 115 44.3
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 6.5e-18 94.7 138 34.8
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 1.4e-17 93.6 114 43.0
PSO384G3069 Papaver somniferum HOM05D005395 ORTHO05D006352 1.4e-17 93.6 98 45.9
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 2.1e-16 89.7 115 41.7
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 3.9e-15 85.5 147 38.8
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 3.9e-15 85.5 141 36.2
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 3.9e-15 85.5 132 34.1
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 5.2e-15 85.1 136 38.2
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 6.7e-15 84.7 141 36.9
QL05p050737 Quercus lobata HOM05D005395 ORTHO05D006352 8.8e-15 84.3 122 39.3
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 1.1e-14 84.0 141 36.2
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 2.0e-14 83.2 100 43.0
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 3.3e-14 82.4 141 36.2
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 3.3e-14 82.4 141 36.2
Mapoly0009s0015 Marchantia polymorpha HOM05D005395 ORTHO05D006352 5.7e-14 81.6 105 43.8
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 7.4e-14 81.3 132 37.1
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 1.7e-13 80.1 134 36.6
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 4.8e-13 78.6 147 36.7
Pp3c1_42700 Physcomitrium patens HOM05D005395 ORTHO05D006352 3.1e-12 75.9 97 38.1
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 4.1e-12 75.5 84 44.0
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 6.5e-10 68.2 96 38.5
CBR_g45714 Chara braunii HOM05D005395 ORTHO05D006352 1.1e-09 67.4 104 34.6
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 1.1e-09 67.4 109 33.9
Cfa026815 Carpinus fangiana HOM05D005395 ORTHO05D006352 1.4e-07 60.5 101 34.7


User provided reference genes

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