Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 3.3e-121 438.3 212 100.0
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 2.1e-83 312.8 161 90.1
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 2.8e-72 275.8 198 67.7
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 1.8e-71 273.1 195 66.7
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 3.4e-70 268.9 193 68.4
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 1.0e-69 267.3 205 63.9
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 1.8e-66 256.5 199 64.8
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 8.7e-66 254.2 206 62.1
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 4.3e-65 251.9 193 63.7
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 4.3e-65 251.9 196 62.8
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 4.3e-65 251.9 199 62.8
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 4.3e-65 251.9 196 67.3
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 5.7e-65 251.5 198 64.1
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 7.4e-65 251.1 198 64.1
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 2.8e-64 249.2 192 64.6
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 2.4e-63 246.1 197 60.9
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 2.4e-63 246.1 192 63.5
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 3.1e-63 245.7 196 64.3
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 5.3e-63 245.0 202 59.9
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 5.3e-63 245.0 206 59.7
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 1.2e-62 243.8 196 61.2
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 1.5e-62 243.4 192 62.5
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 4.5e-62 241.9 190 65.3
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 7.6e-62 241.1 193 63.2
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 7.6e-62 241.1 198 60.1
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 1.0e-61 240.7 192 62.0
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 1.7e-61 240.0 193 63.2
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 2.2e-61 239.6 197 61.9
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 2.9e-61 239.2 195 62.6
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 6.5e-61 238.0 197 61.4
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 1.4e-60 236.9 192 62.5
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 1.4e-60 236.9 200 61.5
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 2.5e-60 236.1 202 58.9
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 2.5e-60 236.1 211 56.9
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 3.2e-60 235.7 196 58.7
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 3.2e-60 235.7 196 60.2
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 4.2e-60 235.3 197 58.9
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 5.5e-60 235.0 192 60.9
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 2.1e-59 233.0 204 56.4
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 2.7e-59 232.6 197 59.4
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 3.5e-59 232.3 193 59.6
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 7.9e-59 231.1 197 59.4
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 7.9e-59 231.1 197 59.4
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 1.3e-58 230.3 198 60.1
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 1.8e-58 229.9 211 55.5
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 1.8e-58 229.9 208 58.2
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 3.0e-58 229.2 221 52.0
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 3.0e-58 229.2 194 60.3
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 3.9e-58 228.8 188 61.7
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 8.7e-58 227.6 197 60.4
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 1.5e-57 226.9 190 57.4
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 1.5e-57 226.9 213 56.3
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 1.9e-57 226.5 195 57.4
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 2.5e-57 226.1 199 56.8
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 2.5e-57 226.1 206 53.9
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 7.4e-57 224.6 221 52.5
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 7.4e-57 224.6 194 57.2
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 9.7e-57 224.2 194 60.3
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 9.7e-57 224.2 193 59.1
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 1.3e-56 223.8 193 58.5
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 2.2e-56 223.0 190 56.8
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 2.2e-56 223.0 190 56.8
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 2.2e-56 223.0 190 56.8
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 2.2e-56 223.0 205 58.0
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 4.8e-56 221.9 190 56.8
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 4.8e-56 221.9 190 56.3
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 4.8e-56 221.9 191 56.5
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 6.3e-56 221.5 191 56.5
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 8.2e-56 221.1 191 58.6
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 1.4e-55 220.3 202 56.4
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 1.4e-55 220.3 194 59.3
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 2.4e-55 219.5 195 57.4
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 3.1e-55 219.2 215 53.5
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 6.9e-55 218.0 202 53.5
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 9.0e-55 217.6 201 55.2
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 9.0e-55 217.6 204 53.9
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 1.2e-54 217.2 191 56.0
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 2.0e-54 216.5 206 52.4
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 2.6e-54 216.1 191 56.5
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 3.4e-54 215.7 197 55.3
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 4.5e-54 215.3 191 55.5
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 5.9e-54 214.9 202 57.4
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 1.3e-53 213.8 193 56.0
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 1.3e-53 213.8 214 52.8
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 1.7e-53 213.4 185 60.0
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 2.2e-53 213.0 192 55.2
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 2.2e-53 213.0 185 61.6
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 2.2e-53 213.0 202 56.4
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 5.0e-53 211.8 190 54.7
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 6.5e-53 211.5 209 53.1
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 1.1e-52 210.7 190 54.7
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 4.2e-52 208.8 195 55.9
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 1.6e-51 206.8 199 52.8
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 2.3e-50 203.0 196 54.1
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 2.0e-49 199.9 193 54.4
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 3.3e-49 199.1 216 49.5
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 7.4e-49 198.0 163 63.8
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 1.5e-46 190.3 169 56.8
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 1.4e-44 183.7 171 55.0
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 6.7e-42 174.9 103 77.7
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 1.2e-38 164.1 112 69.6
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 7.7e-38 161.4 204 42.6
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 1.0e-37 161.0 146 56.2
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 1.0e-37 161.0 146 56.2
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 2.9e-37 159.5 238 39.5
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 2.9e-37 159.5 199 44.2
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 1.2e-35 154.1 237 40.9
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 2.1e-35 153.3 148 54.1
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 6.1e-35 151.8 113 66.4
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 2.6e-33 146.4 112 61.6
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 1.3e-29 134.0 147 49.7
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 2.5e-28 129.8 113 54.9
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 3.8e-21 105.9 121 47.9
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 2.1e-19 100.1 121 51.2
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 1.0e-18 97.8 77 61.0
Phvul.004G112200 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 1.7e-16 90.5 121 43.8
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 1.0e-13 81.3 57 71.9
MD08G1060400 Malus domestica HOM05D006792 ORTHO05D008489 7.3e-12 75.1 46 71.7
Os11g0597500 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 2.6e-09 66.6 141 32.6
Cre17.g702150 Chlamydomonas reinhardtii HOM05D005776 ORTHO05D007333 8.3e-08 61.6 76 40.8
Os11g0597601 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 3.2e-07 59.7 54 51.9
Cre14.g615250 Chlamydomonas reinhardtii HOM05D006792 ORTHO05D008489 5.4e-07 58.9 84 40.5
Pp3c22_350 Physcomitrium patens HOM05D005776 ORTHO05D007333 7.0e-07 58.5 73 37.0


User provided reference genes

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