Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1358 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 1.2e-302 1042.7 660 100.0
CDE06G0246 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 9.9e-209 730.7 626 78.4
CDE07G0399 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 3.6e-203 712.2 660 68.6
Prupe.3G071700 Prunus persica HOM05D004642 ORTHO05D005466 4.6e-65 253.4 607 37.1
Potri.001G179600 Populus trichocarpa HOM05D004642 ORTHO05D005466 1.3e-59 235.3 599 38.4
Cc04_g03480 Coffea canephora HOM05D004642 ORTHO05D005466 1.3e-54 218.8 574 33.6
Gorai.006G098800 Gossypium raimondii HOM05D004642 ORTHO05D005466 3.1e-53 214.2 416 33.4
MD17G1195700 Malus domestica HOM05D004642 ORTHO05D005466 1.5e-52 211.8 613 34.9
Gohir.D09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 1.0e-51 209.1 416 33.2
Gohir.A09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 1.3e-51 208.8 416 32.9
Lalb_Chr14g0373421 Lupinus albus HOM05D004642 ORTHO05D005466 7.2e-50 203.0 571 32.6
Haze_16437 Corylus avellana HOM05D004642 ORTHO05D005466 1.8e-48 198.4 575 32.9
vmacro18915 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 5.1e-48 196.8 570 27.5
PSO782G0786 Papaver somniferum HOM05D004642 ORTHO05D005466 3.3e-47 194.1 607 30.3
TAR626G0806 Trochodendron aralioides HOM05D004642 ORTHO05D005466 2.2e-46 191.4 608 32.7
QL05p024308 Quercus lobata HOM05D004642 ORTHO05D005466 3.1e-45 187.6 613 29.2
Gohir.A05G129515 Gossypium hirsutum HOM05D004642 ORTHO05D005466 3.8e-43 180.6 427 31.1
Nitab4.5_0000671g0060 Nicotiana tabacum HOM05D004642 ORTHO05D005466 5.0e-43 180.3 572 28.3
Glyma.12G087100 Glycine max HOM05D004642 ORTHO05D005466 1.1e-42 179.1 590 30.3
Thecc.06G086400 Theobroma cacao HOM05D004642 ORTHO05D005466 1.4e-42 178.7 577 34.0
Zm00001eb283760 Zea mays HOM05D004642 ORTHO05D005466 3.6e-41 174.1 637 33.3
Actinidia24760 Actinidia chinensis HOM05D004642 ORTHO05D005466 1.1e-39 169.1 426 31.0
Gorai.009G133100 Gossypium raimondii HOM05D004642 ORTHO05D005466 1.1e-39 169.1 417 29.7
Aa31LG8G3170 Aethionema arabicum HOM05D004642 ORTHO05D005466 2.0e-39 168.3 436 28.9
Cfa002061 Carpinus fangiana HOM05D004642 ORTHO05D005466 2.6e-39 167.9 560 33.6
Glyma.11G187500 Glycine max HOM05D004642 ORTHO05D005466 2.6e-39 167.9 597 32.7
Lsat_1_v5_gn_4_103580 Lactuca sativa HOM05D004642 ORTHO05D005466 1.7e-38 165.2 407 30.0
Sabra01G0147200 Salix brachista HOM05D004642 ORTHO05D005466 1.7e-38 165.2 625 32.8
Gohir.D05G129000 Gossypium hirsutum HOM05D004642 ORTHO05D005466 8.2e-38 162.9 418 29.4
AUR62016441 Chenopodium quinoa HOM05D004642 ORTHO05D005466 7.0e-37 159.8 579 27.5
Duzib235G0715 Durio zibethinus HOM05D004642 ORTHO05D005466 9.1e-37 159.5 598 32.6
Thhalv10020153m.g Eutrema salsugineum HOM05D004642 ORTHO05D005466 1.2e-36 159.1 443 27.1
Nitab4.5_0005851g0030 Nicotiana tabacum HOM05D004642 ORTHO05D005466 2.0e-36 158.3 574 27.7
CSS0030593 Camellia sinensis var. sinensis HOM05D004642 ORTHO05D005466 2.6e-36 157.9 536 36.2
Actinidia08974 Actinidia chinensis HOM05D004642 ORTHO05D005466 5.9e-36 156.8 613 32.5
CARHR091130 Cardamine hirsuta HOM05D004642 ORTHO05D005466 1.3e-35 155.6 440 28.0
Hund00614 Selenicereus undatus HOM05D004642 ORTHO05D005466 1.7e-35 155.2 590 34.4
BcaC09g48580 Brassica carinata HOM05D004642 ORTHO05D005466 2.9e-35 154.5 589 27.5
Nn2g11790 Nelumbo nucifera HOM05D004642 ORTHO05D005466 3.8e-35 154.1 628 33.6
SalBow2G0306 Salvia bowleyana HOM05D004642 ORTHO05D005466 3.8e-35 154.1 427 29.3
PGR102G3321 Punica granatum HOM05D004642 ORTHO05D005466 5.0e-35 153.7 439 27.1
Dinv38051 Davidia involucrata HOM05D004642 ORTHO05D005466 8.5e-35 152.9 335 34.9
Sed0016127 Sechium edule HOM05D004642 ORTHO05D005466 5.5e-34 150.2 437 26.3
AUR62011627 Chenopodium quinoa HOM05D004642 ORTHO05D005466 7.2e-34 149.8 579 28.5
Lj3g0008789 Lotus japonicus HOM05D004642 ORTHO05D005466 1.2e-33 149.1 596 31.2
MELO3C024228.2 Cucumis melo HOM05D004642 ORTHO05D005466 4.7e-33 147.1 322 31.4
Dinv30514 Davidia involucrata HOM05D004642 ORTHO05D005466 6.1e-33 146.7 617 32.1
Aqoxy7G01787 Aquilegia oxysepala HOM05D004642 ORTHO05D005466 5.2e-32 143.7 604 32.3
Lalb_Chr04g0262651 Lupinus albus HOM05D004642 ORTHO05D005466 6.7e-32 143.3 576 28.5
Oeu033484.1 Olea europaea HOM05D004642 ORTHO05D005466 6.7e-32 143.3 409 29.1
Duzib192G0922 Durio zibethinus HOM05D004642 ORTHO05D005466 1.7e-30 138.7 442 27.8
PSO063G4770 Papaver somniferum HOM05D004642 ORTHO05D005466 1.7e-30 138.7 590 31.9
Ciclev10025273m.g Citrus clementina HOM05D004642 ORTHO05D005466 3.7e-30 137.5 574 33.3
PGSC0003DMG400002564 Solanum tuberosum HOM05D004642 ORTHO05D005466 8.3e-30 136.3 575 32.2
SEGI_16798 Sequoiadendron giganteum HOM05D004642 ORTHO05D005466 1.4e-29 135.6 599 29.4
Rhsim08G0221000 Rhododendron simsii HOM05D004642 ORTHO05D005466 3.1e-29 134.4 575 26.4
Sopen03g039110 Solanum pennellii HOM05D004642 ORTHO05D005466 5.3e-29 133.7 574 31.9
Nn8g39228 Nelumbo nucifera HOM05D004642 ORTHO05D005466 3.5e-28 131.0 578 32.7
CiPaw.02G151400 Carya illinoinensis HOM05D004642 ORTHO05D005466 4.5e-28 130.6 610 29.7
GSVIVG01017115001 Vitis vinifera HOM05D004642 ORTHO05D005466 4.5e-28 130.6 418 27.3
HPP92_020045 Vanilla planifolia HOM05D004642 ORTHO05D005466 5.9e-28 130.2 564 31.7
CsaV3_7G033140 Cucumis sativus L. HOM05D004642 ORTHO05D005466 7.7e-28 129.8 406 25.9
SGA_v2.0_scaffold4G01996 Striga asiatica HOM05D004642 ORTHO05D005466 1.7e-27 128.6 591 26.1
MD09G1213800 Malus domestica HOM05D004642 ORTHO05D005466 8.5e-27 126.3 575 31.0
Medtr4g054960 Medicago truncatula HOM05D004642 ORTHO05D005466 2.5e-26 124.8 436 26.1
ClCG09G002170 Citrullus lanatus HOM05D004642 ORTHO05D005466 7.2e-26 123.2 411 25.1
VMungo1127G1134 Vigna mungo HOM05D004642 ORTHO05D005466 1.6e-25 122.1 446 25.6
Hund06610 Selenicereus undatus HOM05D004642 ORTHO05D005466 3.6e-25 120.9 401 30.4
Solyc03g120230.3 Solanum lycopersicum HOM05D004642 ORTHO05D005466 3.6e-25 120.9 574 31.2
Atru.chr1.3266 Acer truncatum HOM05D004642 ORTHO05D005466 4.7e-25 120.6 422 27.7
Zm00001eb122200 Zea mays HOM05D004642 ORTHO05D005466 6.1e-25 120.2 394 27.2
A03p39630 Brassica napus HOM05D004642 ORTHO05D005466 4.0e-24 117.5 430 23.7
Lalb_Chr01g0012651 Lupinus albus HOM05D004642 ORTHO05D005466 6.8e-24 116.7 345 27.8
TAR636G0382 Trochodendron aralioides HOM05D004642 ORTHO05D005466 1.7e-22 112.1 164 43.9
ECA248G0988 Erigeron canadensis HOM05D004642 ORTHO05D005466 3.7e-22 110.9 304 28.9
BraA03t13110Z Brassica rapa HOM05D004642 ORTHO05D005466 8.3e-22 109.8 428 22.7
CiPaw.01G239700 Carya illinoinensis HOM05D004642 ORTHO05D005466 8.3e-22 109.8 467 24.2
Ah.01g021290 Amaranthus hybridus HOM05D004642 ORTHO05D005466 1.4e-21 109.0 577 25.3
Os01g0180300 Oryza sativa ssp. japonica HOM05D004642 ORTHO05D005466 3.1e-21 107.8 348 28.2
Rhsim12G0197600 Rhododendron simsii HOM05D004642 ORTHO05D005466 4.1e-21 107.5 402 25.4
BcaB04g20887 Brassica carinata HOM05D004642 ORTHO05D005466 5.4e-21 107.1 596 23.8
TWI75G1656 Tripterygium wilfordii HOM05D004642 ORTHO05D005466 9.1e-21 106.3 304 28.0
RcHm_v2.0_Chr2g0137781 Rosa chinensis HOM05D004642 ORTHO05D005466 1.6e-20 105.5 423 25.1
Sed0016916 Sechium edule HOM05D004642 ORTHO05D005466 7.7e-20 103.2 578 27.2
TPR.G15588 Trifolium pratense HOM05D004642 ORTHO05D005466 1.0e-19 102.8 629 29.9
Phvul.011G092000 Phaseolus vulgaris HOM05D004642 ORTHO05D005466 1.3e-19 102.4 430 25.3
C01p48370 Brassica napus HOM05D004642 ORTHO05D005466 2.3e-19 101.7 427 27.2
Lj5A61G44 Lonicera japonica HOM05D004642 ORTHO05D005466 2.3e-19 101.7 380 25.8
Ca_19383_v3 Cicer arietinum L. HOM05D004642 ORTHO05D005466 2.9e-19 101.3 443 23.7
Hma1.2p1_0323F.1_g125210 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 8.6e-19 99.8 433 27.5
unitig_578.g16688 Utricularia gibba HOM05D004642 ORTHO05D005466 8.6e-19 99.8 609 22.7
BcaC01g03843 Brassica carinata HOM05D004642 ORTHO05D005466 1.1e-18 99.4 428 22.0
C03p48030 Brassica napus HOM05D004642 ORTHO05D005466 1.1e-18 99.4 428 22.0
BolC3t17082H Brassica oleracea HOM05D004642 ORTHO05D005466 1.1e-18 99.4 428 22.0
Eucgr.F03012 Eucalyptus grandis HOM05D004642 ORTHO05D005466 1.5e-18 99.0 348 25.3
A05p33450 Brassica napus HOM05D004642 ORTHO05D005466 2.5e-18 98.2 454 23.1
COL.COLO4_30362 Corchorus olitorius HOM05D004642 ORTHO05D005466 2.5e-18 98.2 446 23.5
BcaB04g18872 Brassica carinata HOM05D004642 ORTHO05D005466 3.3e-18 97.8 459 22.7
MD09G1213500 Malus domestica HOM05D004642 ORTHO05D005466 7.2e-18 96.7 298 28.9
unitig_744.g24335 Utricularia gibba HOM05D004642 ORTHO05D005466 7.2e-18 96.7 325 24.6
Psat7g189080 Pisum sativum HOM05D004642 ORTHO05D005466 9.5e-18 96.3 437 23.3
vmacro16950 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 2.8e-17 94.7 304 27.6
Os05g0180400 Oryza sativa ssp. japonica HOM05D004642 ORTHO05D005466 5.2e-16 90.5 585 25.3
ATR0037G055 Amborella trichopoda HOM05D004642 ORTHO05D005466 4.4e-15 87.4 128 40.6
Migut.D01034 Erythranthe guttata HOM05D004642 ORTHO05D005466 5.7e-15 87.0 190 34.7
Glyma.11G237600 Glycine max HOM05D004642 ORTHO05D005466 7.5e-15 86.7 308 38.0
HPP92_019980 Vanilla planifolia HOM05D004642 ORTHO05D005466 7.5e-15 86.7 356 24.2
Thhalv10023042m.g Eutrema salsugineum HOM05D004642 ORTHO05D005466 1.3e-14 85.9 239 27.2
MD09G1212900 Malus domestica HOM05D004642 ORTHO05D005466 6.3e-14 83.6 151 38.4
Peaxi162Scf00015g00335 Petunia axillaris HOM05D004642 ORTHO05D005466 8.3e-14 83.2 574 28.4
TAR624G1258 Trochodendron aralioides HOM05D004642 ORTHO05D005466 8.3e-14 83.2 262 43.1
BolC1t04795H Brassica oleracea HOM05D004642 ORTHO05D005466 1.1e-13 82.8 176 35.8
FvH4_6g31081 Fragaria vesca HOM05D004642 ORTHO05D005466 3.1e-13 81.3 421 22.8
HanXRQChr16g0500971 Helianthus annuus HOM05D004642 ORTHO05D005466 5.4e-13 80.5 577 29.6
BcaB06g25698 Brassica carinata HOM05D004642 ORTHO05D005466 7.0e-13 80.1 447 21.7
FAN14G2337 Fragaria x ananassa HOM05D004642 ORTHO05D005466 9.2e-13 79.7 421 22.6
EL10Ac9g21996 Beta vulgaris HOM05D004642 ORTHO05D005466 1.6e-12 79.0 129 38.0
arahy.Tifrunner.gnm1.ann1.CA04QB Arachis hypogaea HOM05D004642 ORTHO05D005466 1.0e-11 76.3 417 23.0
arahy.Tifrunner.gnm1.ann1.Z6VQ0W Arachis hypogaea HOM05D004642 ORTHO05D005466 1.0e-11 76.3 417 23.0
FAN09G1651 Fragaria x ananassa HOM05D004642 ORTHO05D005466 1.3e-11 75.9 422 23.0
C05p50450 Brassica napus HOM05D004642 ORTHO05D005466 5.0e-11 73.9 152 36.8
THA.LOC104817998 Tarenaya hassleriana HOM05D004642 ORTHO05D005466 5.0e-11 73.9 320 24.4
Manes.11G047800 Manihot esculenta HOM05D004642 ORTHO05D005466 2.5e-10 71.6 632 24.2
TAR624G0442 Trochodendron aralioides HOM05D004642 ORTHO05D005466 3.3e-10 71.2 115 44.3
AT3G16000 Arabidopsis thaliana HOM05D004642 ORTHO05D005466 9.5e-10 69.7 429 20.3
BolC5t33791H Brassica oleracea HOM05D004642 ORTHO05D005466 9.5e-10 69.7 467 21.6
Sc21g0005100 Simmondsia chinensis HOM05D004642 ORTHO05D005466 1.6e-09 68.9 88 42.0
FAN02G1410 Fragaria x ananassa HOM05D004642 ORTHO05D005466 2.1e-09 68.6 145 34.5
Hma1.2p1_0323F.1_g125200 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 2.1e-09 68.6 97 42.3
MD09G1213300 Malus domestica HOM05D004642 ORTHO05D005466 2.8e-09 68.2 118 34.7
arahy.Tifrunner.gnm1.ann1.D5EQ93 Arachis hypogaea HOM05D004642 ORTHO05D005466 4.7e-09 67.4 316 25.0
arahy.Tifrunner.gnm1.ann1.I53961 Arachis hypogaea HOM05D004642 ORTHO05D005466 8.0e-09 66.6 432 21.5
CAN.G438.64 Capsicum annuum HOM05D004642 ORTHO05D005466 1.4e-08 65.9 409 20.0
Carub.0003s1573 Capsella rubella HOM05D004642 ORTHO05D005466 1.5e-07 62.4 440 20.2
AL3G28650 Arabidopsis lyrata HOM05D004642 ORTHO05D005466 3.4e-07 61.2 442 19.2
SalBow2G2616 Salvia bowleyana HOM05D004642 ORTHO05D005466 5.8e-07 60.5 436 21.6
HanXRQChr09g0275271 Helianthus annuus HOM05D004642 ORTHO05D005466 7.5e-07 60.1 103 38.8
Sp3g14350 Schrenkiella parvula HOM05D004642 ORTHO05D005466 9.8e-07 59.7 443 19.6
BraA05t22169Z Brassica rapa HOM05D004642 ORTHO05D005466 8.3e-06 56.6 457 19.3


User provided reference genes

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