Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 2.2e-117 425.6 217 100.0
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 3.9e-53 212.2 219 53.4
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 3.3e-52 209.1 222 54.5
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 2.9e-48 196.1 217 51.2
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 1.4e-47 193.7 216 52.3
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 2.4e-47 193.0 220 51.8
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 5.4e-47 191.8 222 51.8
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 5.4e-47 191.8 217 49.3
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 1.2e-46 190.7 219 49.8
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 6.0e-46 188.3 220 50.9
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 6.0e-46 188.3 217 49.8
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 1.8e-45 186.8 219 50.2
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 2.3e-45 186.4 111 88.3
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 2.3e-45 186.4 218 48.6
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.9e-45 185.7 222 50.5
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 3.3e-44 182.6 220 48.2
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 3.3e-44 182.6 222 46.4
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 5.6e-44 181.8 220 48.6
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 7.4e-44 181.4 226 48.2
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 9.6e-44 181.0 219 47.0
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 1.3e-43 180.6 218 46.8
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 1.3e-43 180.6 221 49.3
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.6e-43 180.3 222 45.0
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 1.6e-43 180.3 222 45.5
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 3.6e-43 179.1 218 46.3
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 3.6e-43 179.1 218 46.3
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.4e-42 177.2 218 45.9
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 1.8e-42 176.8 229 50.7
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 4.0e-42 175.6 218 48.6
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 6.9e-42 174.9 213 47.9
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 9.0e-42 174.5 217 46.5
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 9.0e-42 174.5 226 46.5
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 2.0e-41 173.3 223 46.6
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 2.6e-41 172.9 214 48.6
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 3.4e-41 172.6 224 46.0
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 5.8e-41 171.8 220 47.3
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 7.6e-41 171.4 212 44.3
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 7.6e-41 171.4 225 47.6
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 9.9e-41 171.0 221 48.9
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.2e-40 169.9 213 47.4
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.9e-40 169.5 213 46.0
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 3.8e-40 169.1 218 45.9
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 4.9e-40 168.7 220 44.5
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 8.4e-40 167.9 222 48.6
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.4e-39 167.2 217 44.2
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 1.4e-39 167.2 216 46.3
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 1.4e-39 167.2 219 44.3
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.9e-39 166.8 220 44.1
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 1.9e-39 166.8 216 44.4
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 2.4e-39 166.4 222 46.4
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 3.2e-39 166.0 212 44.3
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 3.2e-39 166.0 215 41.9
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 5.5e-39 165.2 218 44.0
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 1.2e-38 164.1 215 43.7
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 1.6e-38 163.7 213 45.1
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 2.1e-38 163.3 219 44.3
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.7e-38 162.9 219 43.8
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 4.6e-38 162.2 225 45.3
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 1.0e-37 161.0 218 45.0
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 1.0e-37 161.0 225 44.4
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 1.3e-37 160.6 221 44.8
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 1.8e-37 160.2 221 43.4
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 1.8e-37 160.2 221 46.6
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 2.3e-37 159.8 214 43.0
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 2.3e-37 159.8 231 42.9
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 2.3e-37 159.8 223 46.2
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 3.0e-37 159.5 222 46.4
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 1.5e-36 157.1 266 40.6
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 1.9e-36 156.8 228 41.2
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 1.9e-36 156.8 238 40.3
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 3.3e-36 156.0 209 42.6
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 9.6e-36 154.5 209 41.6
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 9.6e-36 154.5 190 45.3
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 4.8e-35 152.1 210 41.9
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 6.2e-35 151.8 209 43.1
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 6.2e-35 151.8 228 42.5
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 1.4e-34 150.6 224 43.8
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 2.4e-34 149.8 218 42.2
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 2.0e-33 146.7 173 49.1
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 3.4e-33 146.0 211 41.2
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 7.6e-33 144.8 223 41.3
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 2.2e-32 143.3 215 39.1
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 3.8e-32 142.5 231 42.0
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 6.5e-32 141.7 168 50.6
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 1.1e-31 141.0 197 45.2
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 3.2e-31 139.4 223 41.3
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 4.2e-31 139.0 215 45.1
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 1.2e-30 137.5 224 40.6
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.2e-30 137.5 234 40.2
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 2.1e-30 136.7 223 40.4
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 3.5e-30 136.0 233 38.2
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 6.0e-30 135.2 234 39.3
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 1.0e-29 134.4 128 59.4
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 1.1e-28 131.0 213 38.5
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 6.3e-27 125.2 224 39.3
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 6.3e-27 125.2 223 36.3
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 8.2e-27 124.8 235 37.9
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.1e-26 124.4 232 39.2
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.8e-26 123.6 142 45.8
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 1.8e-26 123.6 212 38.2
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 3.1e-26 122.9 126 52.4
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 1.5e-25 120.6 228 39.5
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 2.6e-25 119.8 218 39.4
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 4.6e-22 109.0 217 31.8
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 5.7e-20 102.1 171 38.6
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 1.3e-19 100.9 118 44.1
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 1.1e-18 97.8 118 44.1
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 5.9e-17 92.0 126 48.4
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 2.9e-16 89.7 240 32.1
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 4.6e-14 82.4 223 30.9
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 2.6e-12 76.6 239 28.5
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 1.3e-11 74.3 56 60.7
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 6.9e-10 68.6 101 39.6
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 2.0e-09 67.0 85 45.9
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 8.5e-08 61.6 50 58.0
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 4.2e-07 59.3 87 41.4
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 4.2e-07 59.3 86 39.5
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 9.4e-07 58.2 87 42.5


User provided reference genes

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