Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 5.3e-41 170.6 89 100.0
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 2.6e-40 168.3 89 98.9
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 1.3e-34 149.4 89 80.9
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 1.7e-34 149.1 89 80.9
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 1.7e-34 149.1 89 80.9
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 2.2e-34 148.7 89 82.0
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 8.2e-34 146.7 89 79.8
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 1.1e-33 146.4 88 80.7
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 1.1e-33 146.4 89 79.8
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 3.1e-33 144.8 89 78.7
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 3.1e-33 144.8 89 78.7
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 3.1e-33 144.8 89 82.0
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 3.1e-33 144.8 89 82.0
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 4.1e-33 144.4 89 78.7
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 5.3e-33 144.1 89 77.5
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 5.3e-33 144.1 89 79.8
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 5.3e-33 144.1 89 80.9
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 7.0e-33 143.7 89 78.7
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 9.1e-33 143.3 89 77.5
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 9.1e-33 143.3 89 77.5
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 9.1e-33 143.3 89 77.5
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 9.1e-33 143.3 89 77.5
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 9.1e-33 143.3 89 77.5
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 1.6e-32 142.5 89 80.9
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.6e-32 142.5 89 76.4
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 2.0e-32 142.1 89 76.4
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 2.0e-32 142.1 89 76.4
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 2.6e-32 141.7 89 79.8
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 2.6e-32 141.7 89 79.8
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 2.6e-32 141.7 89 75.3
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 2.6e-32 141.7 89 79.8
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.6e-32 141.7 89 77.5
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 4.5e-32 141.0 89 76.4
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 5.9e-32 140.6 89 80.9
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.3e-31 139.4 89 75.3
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 1.3e-31 139.4 89 76.4
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 5.0e-31 137.5 89 75.3
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 5.0e-31 137.5 89 74.2
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 5.0e-31 137.5 89 74.2
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 5.0e-31 137.5 89 79.8
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 6.5e-31 137.1 89 76.4
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 6.5e-31 137.1 89 74.2
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 6.5e-31 137.1 89 74.2
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 6.5e-31 137.1 89 76.4
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 6.5e-31 137.1 89 76.4
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 8.5e-31 136.7 89 76.4
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 1.1e-30 136.3 89 71.9
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 1.5e-30 136.0 89 79.8
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.9e-30 135.6 89 78.7
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 3.2e-30 134.8 79 83.5
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 4.2e-30 134.4 89 77.5
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 5.5e-30 134.0 89 74.2
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 7.2e-30 133.7 89 73.0
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 7.2e-30 133.7 89 70.8
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 9.4e-30 133.3 79 81.0
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.2e-29 132.9 89 74.2
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.2e-29 132.9 89 74.2
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 2.7e-29 131.7 89 74.2
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 3.6e-29 131.3 89 75.3
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 3.6e-29 131.3 82 76.8
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 3.6e-29 131.3 89 69.7
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 4.7e-29 131.0 79 79.7
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 6.1e-29 130.6 88 72.7
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 6.1e-29 130.6 87 72.4
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 6.1e-29 130.6 82 80.5
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 8.0e-29 130.2 78 80.8
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 8.0e-29 130.2 89 71.9
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 1.0e-28 129.8 82 78.0
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 2.3e-28 128.6 83 73.5
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 5.2e-28 127.5 88 70.5
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 5.2e-28 127.5 80 78.8
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 6.7e-28 127.1 82 76.8
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 6.7e-28 127.1 89 67.4
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 1.5e-27 125.9 82 76.8
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 3.3e-27 124.8 79 77.2
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 3.3e-27 124.8 89 69.7
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 3.3e-27 124.8 89 69.7
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 3.3e-27 124.8 89 69.7
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 3.3e-27 124.8 89 69.7
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 3.3e-27 124.8 89 69.7
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 3.3e-27 124.8 89 69.7
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 4.4e-27 124.4 89 69.7
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 4.4e-27 124.4 89 70.8
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 5.7e-27 124.0 89 71.9
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 5.7e-27 124.0 89 69.7
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 5.7e-27 124.0 89 69.7
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 7.5e-27 123.6 89 68.5
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 9.7e-27 123.2 89 68.5
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 1.3e-26 122.9 89 68.5
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 1.3e-26 122.9 89 68.5
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 3.7e-26 121.3 82 72.0
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 3.7e-26 121.3 87 70.1
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 6.3e-26 120.6 82 76.8
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.4e-25 119.4 72 80.6
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 2.4e-25 118.6 72 83.3
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 3.1e-25 118.2 89 64.0
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 4.1e-25 117.9 89 68.5
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 4.1e-25 117.9 88 65.9
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 7.0e-25 117.1 72 80.6
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 7.0e-25 117.1 72 75.0
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 1.2e-24 116.3 86 69.8
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 2.0e-24 115.5 72 77.8
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 2.7e-24 115.2 72 75.0
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 3.5e-24 114.8 79 69.6
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 5.9e-24 114.0 76 75.0
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 7.7e-24 113.6 75 76.0
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 1.0e-23 113.2 72 80.6
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.0e-23 113.2 72 79.2
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 1.0e-23 113.2 88 61.4
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 1.3e-23 112.8 72 76.4
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 3.8e-23 111.3 84 65.5
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 3.8e-23 111.3 72 76.4
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 6.5e-23 110.5 72 79.2
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 8.5e-23 110.2 84 64.3
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 1.1e-22 109.8 72 76.4
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 1.5e-22 109.4 72 77.8
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.9e-22 109.0 89 60.7
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.2e-22 108.2 72 69.4
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 5.5e-22 107.5 82 64.6
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 9.4e-22 106.7 72 70.8
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.6e-21 105.9 89 59.6
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 3.6e-21 104.8 88 58.0
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 3.6e-21 104.8 70 77.1
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 1.4e-20 102.8 95 56.8
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 8.8e-20 100.1 70 71.4
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 1.5e-19 99.4 78 65.4
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 2.0e-19 99.0 75 65.3
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 9.8e-19 96.7 81 61.7
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 3.7e-18 94.7 71 64.8
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.2e-16 89.7 62 75.8
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 2.0e-16 89.0 73 63.0
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 2.7e-16 88.6 73 64.4
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.7e-15 85.9 77 55.8
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.0e-11 72.4 66 54.5
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 1.7e-10 69.3 88 44.3
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.7e-10 69.3 52 61.5
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 1.4e-09 66.2 77 51.9
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 6.6e-07 57.4 80 37.5
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 9.5e-06 53.5 91 29.7


User provided reference genes

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