Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 0.0e+00 1881.3 947 100.0
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 1.3e-148 531.6 370 71.4
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 5.0e-145 519.6 362 73.2
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 1.1e-144 518.5 366 73.0
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 7.2e-144 515.8 359 74.1
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 1.6e-143 514.6 356 71.9
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 4.7e-143 513.1 356 71.9
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 4.7e-143 513.1 361 72.6
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 1.0e-142 511.9 353 72.2
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 1.4e-142 511.5 370 68.1
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 3.0e-142 510.4 358 70.9
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 3.9e-142 510.0 356 72.8
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 5.1e-142 509.6 356 71.1
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 1.1e-141 508.4 357 72.3
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 1.1e-141 508.4 361 69.8
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 5.7e-141 506.1 359 70.5
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 2.2e-140 504.2 370 69.5
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 2.2e-140 504.2 366 72.1
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 1.1e-139 501.9 362 69.1
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 1.8e-139 501.1 356 70.2
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 1.8e-139 501.1 356 70.2
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 4.1e-139 500.0 370 68.9
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 4.1e-139 500.0 364 70.3
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 4.1e-139 500.0 358 71.2
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 7.0e-139 499.2 377 69.5
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 7.0e-139 499.2 351 72.1
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 1.2e-138 498.4 414 64.7
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 1.5e-138 498.0 359 71.0
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 2.6e-138 497.3 356 71.6
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 1.7e-137 494.6 316 76.9
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 2.9e-137 493.8 364 68.4
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 2.9e-137 493.8 365 71.0
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 3.8e-137 493.4 364 70.3
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 3.8e-137 493.4 356 69.7
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 3.8e-137 493.4 353 70.5
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 6.5e-137 492.7 364 70.3
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 1.1e-136 491.9 376 66.2
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 1.4e-136 491.5 367 69.2
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.4e-136 491.5 364 70.3
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 1.4e-136 491.5 359 70.5
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 4.2e-136 490.0 360 68.9
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 4.2e-136 490.0 360 69.7
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 1.2e-135 488.4 367 68.9
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 6.1e-135 486.1 356 70.5
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 3.0e-134 483.8 367 68.4
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 3.0e-134 483.8 311 74.3
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 3.0e-134 483.8 369 68.0
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 5.2e-134 483.0 353 70.3
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 8.8e-134 482.3 358 69.6
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 8.8e-134 482.3 358 69.3
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 8.8e-134 482.3 360 68.3
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 1.1e-133 481.9 316 74.7
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 1.5e-133 481.5 358 67.3
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 2.6e-133 480.7 370 67.8
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 4.4e-133 479.9 357 69.7
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 7.4e-133 479.2 398 64.6
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 2.8e-132 477.2 359 68.5
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 2.8e-132 477.2 359 68.2
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 2.8e-132 477.2 376 67.0
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 1.4e-131 474.9 357 67.8
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 1.4e-131 474.9 398 62.3
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 3.1e-131 473.8 387 64.3
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 3.1e-131 473.8 357 68.1
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 4.1e-131 473.4 356 67.7
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 4.1e-131 473.4 316 73.4
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 5.3e-131 473.0 351 67.5
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 7.0e-131 472.6 359 67.1
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 7.0e-131 472.6 359 68.0
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 9.1e-131 472.2 359 69.9
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 9.1e-131 472.2 316 73.4
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 3.5e-130 470.3 370 65.1
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 1.7e-129 468.0 312 74.4
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 2.2e-129 467.6 358 65.4
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 2.2e-129 467.6 364 66.8
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 6.5e-129 466.1 350 68.0
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 8.5e-129 465.7 356 66.6
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 8.5e-129 465.7 365 65.5
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 8.5e-129 465.7 316 72.2
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 8.5e-129 465.7 317 70.3
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 1.5e-128 464.9 316 74.1
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 2.5e-128 464.2 317 70.7
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 2.7e-127 460.7 291 75.9
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 1.0e-126 458.8 394 62.7
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 1.2e-125 455.3 319 70.8
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 1.2e-125 455.3 293 75.1
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 3.3e-125 453.8 284 78.9
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 2.2e-124 451.1 359 64.9
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 2.2e-124 451.1 316 69.3
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 6.3e-124 449.5 359 66.3
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 8.3e-124 449.1 318 70.1
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 8.3e-124 449.1 318 70.1
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 2.4e-123 447.6 319 69.6
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 2.7e-122 444.1 352 65.6
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 5.9e-122 443.0 426 57.5
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 7.7e-122 442.6 358 64.2
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 3.2e-120 437.2 311 69.8
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 5.5e-120 436.4 297 71.0
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 2.7e-119 434.1 311 69.8
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 3.4e-117 427.2 323 66.9
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 2.2e-116 424.5 376 61.7
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 3.5e-114 417.2 310 68.4
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 7.2e-112 409.5 244 82.0
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 4.0e-110 403.7 258 76.7
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 4.0e-110 403.7 252 78.2
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 2.6e-101 374.4 303 62.4
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 2.2e-100 371.3 315 59.4
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 4.1e-99 367.1 303 63.7
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 2.7e-98 364.4 261 69.7
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 2.5e-96 357.8 334 55.1
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 4.0e-94 350.5 240 71.7
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 2.0e-93 348.2 295 60.7
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 5.8e-93 346.7 355 54.9
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 1.4e-91 342.0 366 54.6
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 1.6e-90 338.6 364 53.0
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 1.3e-89 335.5 358 51.4
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 1.9e-88 331.6 314 54.5
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 1.7e-84 318.5 194 78.9
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 4.9e-84 317.0 283 56.5
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 2.0e-77 295.0 367 48.5
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 4.4e-77 293.9 263 60.5
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 3.9e-73 280.8 199 70.9
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 6.6e-73 280.0 200 71.0
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 9.0e-70 269.6 349 41.5
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 1.9e-64 251.9 332 42.8
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 2.1e-63 248.4 191 64.4
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 5.3e-62 243.8 203 62.1
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 3.4e-61 241.1 198 63.6
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 5.8e-61 240.4 190 63.7
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 3.5e-58 231.1 209 60.8
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 1.8e-57 228.8 166 68.7
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.3e-57 228.4 174 69.0
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 1.6e-55 222.2 344 38.1
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 2.4e-54 218.4 295 39.7
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 5.1e-49 200.7 282 42.2
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 5.1e-49 200.7 136 69.1
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.5e-48 199.1 124 73.4
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 1.7e-44 185.7 160 60.0
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 1.7e-44 185.7 360 33.9
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 5.5e-43 180.6 116 69.8
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.2e-37 162.9 129 62.0
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 2.0e-32 145.6 118 62.7
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 2.0e-32 145.6 159 52.2
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 7.9e-26 123.6 95 67.4
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 2.0e-24 119.0 309 33.0
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 4.8e-23 114.4 88 69.3
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 3.1e-22 111.7 70 72.9
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 6.7e-17 94.0 71 63.4
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 1.3e-15 89.7 85 56.5
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 2.1e-10 72.4 47 74.5


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