Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.9e-122 442.6 231 100.0
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 6.5e-99 364.4 192 99.0
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.6e-60 235.3 225 56.9
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 6.6e-59 231.5 232 54.7
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 9.5e-58 227.6 228 54.4
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 2.0e-55 219.9 229 52.8
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 9.9e-55 217.6 230 52.2
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 2.9e-54 216.1 229 51.5
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 2.9e-54 216.1 227 50.7
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 3.7e-54 215.7 227 50.7
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 3.7e-54 215.7 230 51.7
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 8.3e-54 214.5 236 52.5
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 1.1e-53 214.2 227 50.2
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 1.1e-53 214.2 226 53.1
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.9e-53 213.4 228 52.2
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 2.4e-53 213.0 234 52.1
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.4e-53 213.0 225 54.7
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 3.2e-53 212.6 231 53.7
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 3.2e-53 212.6 227 51.1
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 3.2e-53 212.6 257 49.8
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 5.4e-53 211.8 227 54.6
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 5.4e-53 211.8 225 54.7
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 7.1e-53 211.5 252 48.0
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 7.1e-53 211.5 228 50.9
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 9.2e-53 211.1 230 51.7
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 1.6e-52 210.3 225 55.6
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 2.1e-52 209.9 230 50.0
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 3.5e-52 209.1 229 50.2
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 3.5e-52 209.1 227 52.0
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 6.0e-52 208.4 226 52.2
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 7.8e-52 208.0 227 52.0
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 1.0e-51 207.6 237 51.1
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.0e-51 207.6 255 49.4
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.3e-51 207.2 251 47.8
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 1.7e-51 206.8 243 51.4
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 3.9e-51 205.7 246 50.8
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 3.9e-51 205.7 251 47.0
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 6.6e-51 204.9 227 51.1
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 1.9e-50 203.4 244 51.2
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 2.5e-50 203.0 227 48.0
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 2.5e-50 203.0 248 47.6
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 2.5e-50 203.0 250 47.6
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 3.3e-50 202.6 251 48.6
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 4.3e-50 202.2 257 48.2
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 1.6e-49 200.3 226 50.9
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 4.7e-49 198.7 226 50.9
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 6.2e-49 198.4 241 49.0
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 6.2e-49 198.4 238 48.3
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 8.1e-49 198.0 252 48.8
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 1.1e-48 197.6 230 48.7
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 6.8e-48 194.9 260 47.3
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 2.6e-47 193.0 237 48.5
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 3.4e-47 192.6 218 49.5
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 5.8e-47 191.8 251 45.8
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 7.6e-47 191.4 243 47.3
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 1.3e-46 190.7 295 42.0
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 2.9e-46 189.5 230 49.6
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 2.9e-46 189.5 241 49.0
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 3.8e-46 189.1 217 49.3
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 1.4e-45 187.2 228 49.1
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 2.4e-45 186.4 241 48.5
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 5.4e-45 185.3 235 46.0
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 4.6e-44 182.2 235 46.0
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 1.0e-43 181.0 240 45.0
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 3.9e-43 179.1 225 47.6
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 3.9e-43 179.1 193 54.9
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 8.7e-43 177.9 204 52.9
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 5.6e-42 175.3 229 45.0
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 9.6e-42 174.5 226 45.1
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 1.6e-41 173.7 190 47.9
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 1.4e-40 170.6 234 47.4
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 2.4e-40 169.9 232 47.0
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 2.4e-40 169.9 207 48.3
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 5.3e-40 168.7 203 50.7
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 9.9e-39 164.5 228 40.4
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 9.9e-39 164.5 228 40.4
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 9.9e-39 164.5 228 40.4
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 2.9e-38 162.9 227 40.5
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 3.8e-38 162.5 228 39.9
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 4.9e-38 162.2 229 39.7
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 4.9e-38 162.2 193 48.2
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 1.4e-37 160.6 246 40.2
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 3.2e-37 159.5 229 39.7
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 3.2e-37 159.5 193 48.2
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 9.3e-37 157.9 228 39.5
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 1.6e-36 157.1 229 40.2
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 1.3e-35 154.1 228 39.0
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 3.0e-35 152.9 216 48.1
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 2.5e-34 149.8 228 39.9
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 1.3e-33 147.5 219 43.8
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 2.1e-33 146.7 228 37.3
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 1.1e-32 144.4 176 49.4
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 6.9e-32 141.7 270 39.3
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 1.5e-31 140.6 173 45.7
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.5e-31 139.0 120 64.2
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.5e-31 139.0 120 64.2
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 1.7e-30 137.1 284 37.7
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 2.2e-30 136.7 215 43.3
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 1.9e-29 133.7 129 57.4
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 2.4e-29 133.3 120 63.3
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 3.2e-29 132.9 202 44.6
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 4.2e-29 132.5 227 39.6
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 2.7e-28 129.8 227 39.6
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.6e-28 129.0 92 71.7
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 6.0e-28 128.6 101 65.3
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 3.0e-27 126.3 128 53.1
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 3.9e-27 125.9 257 37.0
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 1.2e-23 114.4 264 32.6
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 1.5e-23 114.0 244 34.4
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 1.7e-22 110.5 174 42.0
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 2.7e-20 103.2 97 56.7
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 5.1e-19 99.0 264 32.2
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.6e-18 95.5 132 43.2
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 1.6e-17 94.0 105 49.5
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 2.8e-17 93.2 158 39.2
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 4.8e-17 92.4 127 41.7
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 6.2e-17 92.0 61 75.4
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 6.2e-17 92.0 158 38.6
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 3.1e-16 89.7 58 79.3
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 3.1e-16 89.7 252 29.4
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 4.0e-16 89.4 96 50.0
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 5.8e-15 85.5 53 77.4
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.9e-14 83.2 156 36.5
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 2.5e-13 80.1 142 41.5
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 7.1e-13 78.6 61 60.7
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.5e-12 76.3 140 38.6
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.5e-12 76.3 141 38.3
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 7.9e-12 75.1 175 33.1
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 1.8e-11 73.9 169 32.0
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.5e-10 70.9 176 33.5
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 7.4e-10 68.6 61 55.7
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 7.4e-10 68.6 61 63.9
SEGI_21191 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 1.1e-08 64.7 98 43.9
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 1.0e-06 58.2 220 25.0
Psat1g084080 Pisum sativum HOM05D005370 ORTHO05D006659 3.8e-06 56.2 123 33.3


User provided reference genes

Program Settings