Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1261 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 6.2e-39 163.7 85 100.0
CDE07G2032 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 1.1e-30 136.3 70 100.0
CDE07G0548 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 4.3e-24 114.4 59 100.0
Manes.11G057800 Manihot esculenta HOM05D004531 ORTHO05D005484 3.4e-21 104.8 65 76.9
Glyma.08G077300 Glycine max HOM05D004531 ORTHO05D005484 4.5e-21 104.4 69 72.5
Atru.chr2.471 Acer truncatum HOM05D004531 ORTHO05D005484 1.7e-20 102.4 67 74.6
TWI77G0822 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 2.2e-20 102.1 65 73.8
TAR636G0629 Trochodendron aralioides HOM05D004531 ORTHO05D005484 2.2e-20 102.1 69 72.5
Phvul.002G203400 Phaseolus vulgaris HOM05D004531 ORTHO05D005484 4.9e-20 100.9 67 70.1
PGR042G0151 Punica granatum HOM05D004531 ORTHO05D005484 4.9e-20 100.9 67 73.1
Nn5g28465 Nelumbo nucifera HOM05D004531 ORTHO05D005484 6.5e-20 100.5 66 74.2
CiPaw.08G117500 Carya illinoinensis HOM05D004531 ORTHO05D005484 8.4e-20 100.1 69 72.5
Ciclev10010418m.g Citrus clementina HOM05D004531 ORTHO05D005484 1.1e-19 99.8 67 73.1
Potri.016G024300 Populus trichocarpa HOM05D004531 ORTHO05D005484 1.1e-19 99.8 67 74.6
Sabra16G0021800 Salix brachista HOM05D004531 ORTHO05D005484 1.1e-19 99.8 67 74.6
VMungo0251G1523 Vigna mungo HOM05D004531 ORTHO05D005484 1.1e-19 99.8 67 70.1
Ciclev10012657m.g Citrus clementina HOM05D004531 ORTHO05D005484 1.4e-19 99.4 67 71.6
Dinv37065 Davidia involucrata HOM05D004531 ORTHO05D005484 1.4e-19 99.4 69 68.1
GSVIVG01029836001 Vitis vinifera HOM05D004531 ORTHO05D005484 1.4e-19 99.4 65 72.3
Prupe.8G106900 Prunus persica HOM05D004531 ORTHO05D005484 2.5e-19 98.6 69 69.6
QL09p051267 Quercus lobata HOM05D004531 ORTHO05D005484 2.5e-19 98.6 68 70.6
Sabra16G0030200 Salix brachista HOM05D004531 ORTHO05D005484 2.5e-19 98.6 67 73.1
DCAR_020613 Daucus carota HOM05D004531 ORTHO05D005484 3.2e-19 98.2 64 76.6
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla HOM05D004531 ORTHO05D005484 3.2e-19 98.2 70 67.1
Glyma.05G122300 Glycine max HOM05D004531 ORTHO05D005484 4.2e-19 97.8 69 68.1
Os01g0810000 Oryza sativa ssp. japonica HOM05D004531 ORTHO05D005484 4.2e-19 97.8 68 69.1
Aqoxy2G03324 Aquilegia oxysepala HOM05D004531 ORTHO05D005484 5.5e-19 97.4 67 68.7
Gorai.011G260100 Gossypium raimondii HOM05D004531 ORTHO05D005484 7.1e-19 97.1 65 69.2
Prupe.4G200900 Prunus persica HOM05D004531 ORTHO05D005484 7.1e-19 97.1 69 69.6
Sc15g0002670 Simmondsia chinensis HOM05D004531 ORTHO05D005484 7.1e-19 97.1 67 73.1
MSTRG.6389 Avicennia marina HOM05D004531 ORTHO05D005484 9.3e-19 96.7 72 65.3
Eucgr.A02172 Eucalyptus grandis HOM05D004531 ORTHO05D005484 1.2e-18 96.3 65 70.8
Lj6g0006960 Lotus japonicus HOM05D004531 ORTHO05D005484 1.2e-18 96.3 65 69.2
Lalb_Chr13g0291551 Lupinus albus HOM05D004531 ORTHO05D005484 1.2e-18 96.3 65 67.7
MD15G1425000 Malus domestica HOM05D004531 ORTHO05D005484 1.2e-18 96.3 69 68.1
ECA238G4589 Erigeron canadensis HOM05D004531 ORTHO05D005484 1.6e-18 95.9 64 73.4
CSS0023033 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 2.1e-18 95.5 67 67.2
Sed0018245 Sechium edule HOM05D004531 ORTHO05D005484 2.1e-18 95.5 67 70.1
Thecc.05G127100 Theobroma cacao HOM05D004531 ORTHO05D005484 2.1e-18 95.5 64 70.3
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea HOM05D004531 ORTHO05D005484 2.7e-18 95.1 65 67.7
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea HOM05D004531 ORTHO05D005484 2.7e-18 95.1 65 67.7
MELO3C008757.2 Cucumis melo HOM05D004531 ORTHO05D005484 2.7e-18 95.1 67 71.6
CsaV3_2G009570 Cucumis sativus L. HOM05D004531 ORTHO05D005484 2.7e-18 95.1 67 71.6
MD11G1228700 Malus domestica HOM05D004531 ORTHO05D005484 2.7e-18 95.1 67 68.7
PGSC0003DMG400008162 Solanum tuberosum HOM05D004531 ORTHO05D005484 2.7e-18 95.1 66 71.2
CANSAT56G3883 Cannabis sativa HOM05D004531 ORTHO05D005484 3.5e-18 94.7 69 66.7
CAN.G641.37 Capsicum annuum HOM05D004531 ORTHO05D005484 3.5e-18 94.7 72 63.9
FAN16G0044 Fragaria x ananassa HOM05D004531 ORTHO05D005484 3.5e-18 94.7 66 66.7
FAN21G3808 Fragaria x ananassa HOM05D004531 ORTHO05D005484 3.5e-18 94.7 66 66.7
FAN25G0149 Fragaria x ananassa HOM05D004531 ORTHO05D005484 3.5e-18 94.7 66 66.7
Lj7A661T48 Lonicera japonica HOM05D004531 ORTHO05D005484 3.5e-18 94.7 69 66.7
MBI13_g30229_MAGBIO Magnolia biondii HOM05D004531 ORTHO05D005484 3.5e-18 94.7 78 62.8
FvH4_3g21660 Fragaria vesca HOM05D004531 ORTHO05D005484 4.6e-18 94.4 66 65.2
FAN11G1137 Fragaria x ananassa HOM05D004531 ORTHO05D005484 4.6e-18 94.4 66 65.2
Gohir.A06G180300 Gossypium hirsutum HOM05D004531 ORTHO05D005484 4.6e-18 94.4 65 67.7
Gohir.A08G129500 Gossypium hirsutum HOM05D004531 ORTHO05D005484 4.6e-18 94.4 65 67.7
Gohir.D10G227700 Gossypium hirsutum HOM05D004531 ORTHO05D005484 4.6e-18 94.4 65 67.7
RcHm_v2.0_Chr5g0037141 Rosa chinensis HOM05D004531 ORTHO05D005484 4.6e-18 94.4 66 65.2
Cc06_g18540 Coffea canephora HOM05D004531 ORTHO05D005484 6.0e-18 94.0 67 67.2
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea HOM05D004531 ORTHO05D005484 7.9e-18 93.6 65 66.2
AUR62034356 Chenopodium quinoa HOM05D004531 ORTHO05D005484 7.9e-18 93.6 67 68.7
ClCG11G010890 Citrullus lanatus HOM05D004531 ORTHO05D005484 7.9e-18 93.6 67 70.1
Solyc10g079430.2 Solanum lycopersicum HOM05D004531 ORTHO05D005484 7.9e-18 93.6 66 69.7
Sopen10g030070 Solanum pennellii HOM05D004531 ORTHO05D005484 7.9e-18 93.6 66 69.7
EL10Ac9g22646 Beta vulgaris HOM05D004531 ORTHO05D005484 1.3e-17 92.8 70 64.3
Cpa.g.sc115.24 Carica papaya HOM05D004531 ORTHO05D005484 1.3e-17 92.8 65 66.2
HanXRQChr14g0437741 Helianthus annuus HOM05D004531 ORTHO05D005484 1.3e-17 92.8 63 68.3
Medtr4g094380 Medicago truncatula HOM05D004531 ORTHO05D005484 1.3e-17 92.8 68 63.2
Zm00001eb369240 Zea mays HOM05D004531 ORTHO05D005484 1.3e-17 92.8 67 65.7
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 1.8e-17 92.4 67 71.6
Lsat_1_v5_gn_2_52561 Lactuca sativa HOM05D004531 ORTHO05D005484 1.8e-17 92.4 63 68.3
THA.LOC104820245 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.8e-17 92.4 68 67.6
Cfa002196 Carpinus fangiana HOM05D004531 ORTHO05D005484 2.3e-17 92.0 70 67.1
AUR62022353 Chenopodium quinoa HOM05D004531 ORTHO05D005484 2.3e-17 92.0 67 68.7
Duzib248G1029 Durio zibethinus HOM05D004531 ORTHO05D005484 2.3e-17 92.0 65 66.2
Migut.J01686 Erythranthe guttata HOM05D004531 ORTHO05D005484 2.3e-17 92.0 69 69.6
SalBow6G4182 Salvia bowleyana HOM05D004531 ORTHO05D005484 2.3e-17 92.0 69 60.9
TPR.G23804 Trifolium pratense HOM05D004531 ORTHO05D005484 2.3e-17 92.0 65 67.7
Nitab4.5_0000082g0350 Nicotiana tabacum HOM05D004531 ORTHO05D005484 3.0e-17 91.7 66 66.7
Nitab4.5_0000646g0260 Nicotiana tabacum HOM05D004531 ORTHO05D005484 3.0e-17 91.7 66 66.7
Nitab4.5_0002805g0150 Nicotiana tabacum HOM05D004531 ORTHO05D005484 3.0e-17 91.7 66 66.7
RhsimUnG0021500 Rhododendron simsii HOM05D004531 ORTHO05D005484 3.0e-17 91.7 66 65.2
Nitab4.5_0010736g0010 Nicotiana tabacum HOM05D004531 ORTHO05D005484 8.7e-17 90.1 66 66.7
Haze_23723 Corylus avellana HOM05D004531 ORTHO05D005484 1.1e-16 89.7 60 73.3
EL10Ac1g01672 Beta vulgaris HOM05D004531 ORTHO05D005484 1.5e-16 89.4 67 65.7
SGA_v2.0_scaffold105G30334 Striga asiatica HOM05D004531 ORTHO05D005484 1.5e-16 89.4 72 59.7
PSO210G4508 Papaver somniferum HOM05D004531 ORTHO05D005484 2.5e-16 88.6 68 69.1
HPP92_027481 Vanilla planifolia HOM05D004531 ORTHO05D005484 2.5e-16 88.6 64 64.1
TAR374G0360 Trochodendron aralioides HOM05D004531 ORTHO05D005484 4.3e-16 87.8 62 69.4
vmacro07599 Vaccinium macrocarpon HOM05D004531 ORTHO05D005484 4.3e-16 87.8 66 62.1
Duzib052G0496 Durio zibethinus HOM05D004531 ORTHO05D005484 5.7e-16 87.4 65 63.1
Psat7g095600 Pisum sativum HOM05D004531 ORTHO05D005484 5.7e-16 87.4 67 59.7
SGA_v2.0_scaffold69G23138 Striga asiatica HOM05D004531 ORTHO05D005484 7.4e-16 87.0 74 58.1
Ca_18320_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 9.7e-16 86.7 67 58.2
Hund15691 Selenicereus undatus HOM05D004531 ORTHO05D005484 1.3e-15 86.3 61 70.5
MD11G1228500 Malus domestica HOM05D004531 ORTHO05D005484 1.6e-15 85.9 60 68.3
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 2.8e-15 85.1 66 57.6
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 2.8e-15 85.1 69 56.5
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 2.8e-15 85.1 69 56.5
Thhalv10006222m.g Eutrema salsugineum HOM05D004531 ORTHO05D005484 2.8e-15 85.1 66 59.1
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 3.7e-15 84.7 66 59.1
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 4.8e-15 84.3 66 59.1
C08p35370 Brassica napus HOM05D004531 ORTHO05D005484 4.8e-15 84.3 66 59.1
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 4.8e-15 84.3 66 59.1
Carub.0005s2711 Capsella rubella HOM05D004531 ORTHO05D005484 4.8e-15 84.3 66 59.1
COL.COLO4_07074 Corchorus olitorius HOM05D004531 ORTHO05D005484 4.8e-15 84.3 67 58.2
AL5G42600 Arabidopsis lyrata HOM05D004531 ORTHO05D005484 1.1e-14 83.2 66 59.1
AT3G60360 Arabidopsis thaliana HOM05D004531 ORTHO05D005484 1.1e-14 83.2 66 57.6
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 1.1e-14 83.2 66 57.6
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 1.1e-14 83.2 66 57.6
PSO210G2223 Papaver somniferum HOM05D004531 ORTHO05D005484 1.1e-14 83.2 68 63.2
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 1.1e-14 83.2 66 57.6
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 1.1e-14 83.2 66 57.6
MD11G1228400 Malus domestica HOM05D004531 ORTHO05D005484 2.4e-14 82.0 60 65.0
Peaxi162Scf00002g10416 Petunia axillaris HOM05D004531 ORTHO05D005484 3.1e-14 81.6 57 66.7
MELO3C023654.2 Cucumis melo HOM05D004531 ORTHO05D005484 4.1e-14 81.3 61 63.9
CARHR170680 Cardamine hirsuta HOM05D004531 ORTHO05D005484 6.9e-14 80.5 65 56.9
ClCG09G010350 Citrullus lanatus HOM05D004531 ORTHO05D005484 1.2e-13 79.7 61 63.9
unitig_746.g26802 Utricularia gibba HOM05D004531 ORTHO05D005484 2.6e-13 78.6 67 55.2
RhsimUnG0117400 Rhododendron simsii HOM05D004531 ORTHO05D005484 3.4e-13 78.2 58 63.8
Zm00001eb262530 Zea mays HOM05D000031 ORTHO05D445172 3.4e-13 78.2 56 66.1
ATR1096G053 Amborella trichopoda HOM05D004531 ORTHO05D005484 1.0e-12 76.6 58 58.6
ECA238G1549 Erigeron canadensis HOM05D004531 ORTHO05D005484 1.0e-12 76.6 58 65.5
SMO367G0994 Selaginella moellendorffii HOM05D004531 ORTHO05D005484 1.9e-11 72.4 65 52.3
BraA04t15890Z Brassica rapa HOM05D004531 ORTHO05D005484 2.5e-11 72.0 56 57.1
AagrBONN_evm.TU.Sc2ySwM_228.1021 Anthoceros agrestis HOM05D004531 ORTHO05D005484 1.2e-10 69.7 65 49.2
Mapoly0074s0052 Marchantia polymorpha HOM05D004531 ORTHO05D005484 2.1e-10 68.9 61 52.5
Hund22289 Selenicereus undatus HOM05D004531 ORTHO05D005484 1.0e-09 66.6 57 59.6
TWI38G0613 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 3.0e-09 65.1 46 67.4
CsaV3_7G024290 Cucumis sativus L. HOM05D004531 ORTHO05D005484 6.7e-09 63.9 61 55.7
CBR_g26482 Chara braunii HOM05D004531 ORTHO05D005484 1.7e-07 59.3 59 45.8
Dinv14546 Davidia involucrata HOM05D004531 ORTHO05D005484 4.8e-07 57.8 38 71.1
Pp3c3_27620 Physcomitrium patens HOM05D004531 ORTHO05D005484 4.8e-07 57.8 70 38.6
Pp3s222_10 Physcomitrium patens HOM05D004531 ORTHO05D005484 4.8e-07 57.8 70 38.6


User provided reference genes

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