Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1094 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 7.1e-164 580.5 284 100.0
TAR629G0020 Trochodendron aralioides HOM05D004963 ORTHO05D006638 9.6e-68 261.2 318 45.0
Dinv35107 Davidia involucrata HOM05D004963 ORTHO05D006638 3.6e-67 259.2 318 43.7
RcHm_v2.0_Chr2g0173101 Rosa chinensis HOM05D004963 ORTHO05D006638 4.7e-67 258.8 315 44.8
PSO067G0032 Papaver somniferum HOM05D004963 ORTHO05D006638 6.2e-67 258.5 319 44.8
PSO063G6295 Papaver somniferum HOM05D004963 ORTHO05D006638 8.1e-67 258.1 319 44.5
Duzib147G0997 Durio zibethinus HOM05D004963 ORTHO05D006638 1.8e-66 256.9 319 44.2
Gohir.A09G029300 Gossypium hirsutum HOM05D004963 ORTHO05D006638 3.1e-66 256.1 317 43.5
Nn4g22627 Nelumbo nucifera HOM05D004963 ORTHO05D006638 5.2e-66 255.4 315 45.4
FvH4_6g51430 Fragaria vesca HOM05D004963 ORTHO05D006638 2.6e-65 253.1 315 43.8
COL.COLO4_29124 Corchorus olitorius HOM05D004963 ORTHO05D006638 9.9e-65 251.1 318 43.7
Thecc.04G017500 Theobroma cacao HOM05D004963 ORTHO05D006638 4.9e-64 248.8 317 42.6
Ciclev10014326m.g Citrus clementina HOM05D004963 ORTHO05D006638 1.9e-63 246.9 318 41.2
Sabra16G0224100 Salix brachista HOM05D004963 ORTHO05D006638 2.4e-63 246.5 318 42.8
Prupe.3G292000 Prunus persica HOM05D004963 ORTHO05D006638 4.2e-63 245.7 318 44.3
MD17G1026700 Malus domestica HOM05D004963 ORTHO05D006638 5.4e-63 245.4 316 43.4
Potri.001G345100 Populus trichocarpa HOM05D004963 ORTHO05D006638 9.3e-63 244.6 318 42.1
Manes.17G112100 Manihot esculenta HOM05D004963 ORTHO05D006638 1.6e-62 243.8 318 41.8
CANSAT64G0570 Cannabis sativa HOM05D004963 ORTHO05D006638 2.1e-62 243.4 314 45.2
Medtr6g004840 Medicago truncatula HOM05D004963 ORTHO05D006638 2.1e-62 243.4 317 42.9
Lalb_Chr06g0175731 Lupinus albus HOM05D004963 ORTHO05D006638 4.6e-62 242.3 315 41.6
Ca_04160_v3 Cicer arietinum L. HOM05D004963 ORTHO05D006638 5.1e-61 238.8 318 42.5
Lju41A42T102 Lonicera japonica HOM05D004963 ORTHO05D006638 8.7e-61 238.0 304 42.8
Aqoxy5G03770 Aquilegia oxysepala HOM05D004963 ORTHO05D006638 3.3e-60 236.1 317 43.5
TWI56G0249 Tripterygium wilfordii HOM05D004963 ORTHO05D006638 4.3e-60 235.7 317 42.3
THA.LOC104805370 Tarenaya hassleriana HOM05D004963 ORTHO05D006638 9.6e-60 234.6 311 44.4
FAN14G4225 Fragaria x ananassa HOM05D004963 ORTHO05D006638 6.2e-59 231.9 315 41.6
Hma1.2p1_0999F.1_g246170 Hydrangea macrophylla HOM05D004963 ORTHO05D006638 1.1e-58 231.1 318 41.5
GSVIVG01032403001 Vitis vinifera HOM05D004963 ORTHO05D006638 1.4e-58 230.7 319 41.7
Psat1g054400 Pisum sativum HOM05D004963 ORTHO05D006638 5.3e-58 228.8 318 42.1
Glyma.05G003500 Glycine max HOM05D004963 ORTHO05D006638 9.0e-58 228.0 315 41.6
TPR.G33247 Trifolium pratense HOM05D004963 ORTHO05D006638 1.2e-57 227.6 319 41.1
Lj2g0007459 Lotus japonicus HOM05D004963 ORTHO05D006638 1.5e-57 227.3 319 41.1
Cfa007367 Carpinus fangiana HOM05D004963 ORTHO05D006638 2.6e-57 226.5 319 42.0
CiPaw.03G043900 Carya illinoinensis HOM05D004963 ORTHO05D006638 2.6e-57 226.5 318 42.8
PGR083G0595 Punica granatum HOM05D004963 ORTHO05D006638 2.6e-57 226.5 318 39.9
ClCG10G013870 Citrullus lanatus HOM05D004963 ORTHO05D006638 4.4e-57 225.7 312 40.4
MELO3C026582.2 Cucumis melo HOM05D004963 ORTHO05D006638 4.4e-57 225.7 316 39.6
CsaV3_3G042810 Cucumis sativus L. HOM05D004963 ORTHO05D006638 4.4e-57 225.7 317 40.1
Carub.0007s3510 Capsella rubella HOM05D004963 ORTHO05D006638 9.9e-57 224.6 316 41.8
Thhalv10027618m.g Eutrema salsugineum HOM05D004963 ORTHO05D006638 1.7e-56 223.8 310 41.6
Rhsim10G0015700 Rhododendron simsii HOM05D004963 ORTHO05D006638 1.7e-56 223.8 323 39.6
VMungo0464G1605 Vigna mungo HOM05D004963 ORTHO05D006638 2.9e-56 223.0 315 41.6
AL7G49340 Arabidopsis lyrata HOM05D004963 ORTHO05D006638 4.9e-56 222.2 316 41.1
CAN.G257.2 Capsicum annuum HOM05D004963 ORTHO05D006638 4.9e-56 222.2 307 41.4
Sed0022939 Sechium edule HOM05D004963 ORTHO05D006638 1.1e-55 221.1 316 38.0
ATR0824G203 Amborella trichopoda HOM05D004963 ORTHO05D006638 2.4e-55 219.9 319 39.5
BcaB02g07947 Brassica carinata HOM05D004963 ORTHO05D006638 2.4e-55 219.9 315 41.3
BcaC08g44458 Brassica carinata HOM05D004963 ORTHO05D006638 3.2e-55 219.5 315 41.0
CARHR261510 Cardamine hirsuta HOM05D004963 ORTHO05D006638 4.2e-55 219.2 316 41.8
Phvul.004G006800 Phaseolus vulgaris HOM05D004963 ORTHO05D006638 5.4e-55 218.8 315 41.3
Solyc02g070810.4 Solanum lycopersicum HOM05D004963 ORTHO05D006638 7.1e-55 218.4 311 41.2
Gohir.D09G029066 Gossypium hirsutum HOM05D004963 ORTHO05D006638 1.2e-54 217.6 271 43.9
BraA07t29729Z Brassica rapa HOM05D004963 ORTHO05D006638 1.6e-54 217.2 319 41.1
Sopen02g019920 Solanum pennellii HOM05D004963 ORTHO05D006638 2.1e-54 216.9 311 41.5
PGSC0003DMG400008314 Solanum tuberosum HOM05D004963 ORTHO05D006638 2.1e-54 216.9 311 40.8
BolC6t37108H Brassica oleracea HOM05D004963 ORTHO05D006638 4.6e-54 215.7 330 39.7
AT5G40480 Arabidopsis thaliana HOM05D004963 ORTHO05D006638 5.1e-53 212.2 311 40.8
CSS0016229 Camellia sinensis var. sinensis HOM05D004963 ORTHO05D006638 8.7e-53 211.5 304 40.1
Sp7g01430 Schrenkiella parvula HOM05D004963 ORTHO05D006638 1.9e-52 210.3 315 40.0
AUR62028465 Chenopodium quinoa HOM05D004963 ORTHO05D006638 4.3e-52 209.1 316 38.6
Nitab4.5_0001655g0190 Nicotiana tabacum HOM05D004963 ORTHO05D006638 4.3e-52 209.1 314 39.8
C06p19070 Brassica napus HOM05D004963 ORTHO05D006638 9.6e-52 208.0 342 37.7
Aa31LG9G1130 Aethionema arabicum HOM05D004963 ORTHO05D006638 3.6e-51 206.1 347 38.3
Haze_14742 Corylus avellana HOM05D004963 ORTHO05D006638 3.6e-51 206.1 289 43.3
Nitab4.5_0001040g0180 Nicotiana tabacum HOM05D004963 ORTHO05D006638 3.6e-51 206.1 314 39.5
Sc03g0007420 Simmondsia chinensis HOM05D004963 ORTHO05D006638 4.8e-51 205.7 315 37.8
A07p20280 Brassica napus HOM05D004963 ORTHO05D006638 1.1e-50 204.5 342 37.4
AUR62043498 Chenopodium quinoa HOM05D004963 ORTHO05D006638 1.4e-50 204.1 316 38.3
Cc07_g01650 Coffea canephora HOM05D004963 ORTHO05D006638 1.8e-50 203.8 304 38.2
Peaxi162Scf00796g00213 Petunia axillaris HOM05D004963 ORTHO05D006638 3.1e-50 203.0 315 38.7
Gorai.006G033900 Gossypium raimondii HOM05D004963 ORTHO05D006638 4.0e-50 202.6 244 43.9
vmacro05867 Vaccinium macrocarpon HOM05D004963 ORTHO05D006638 9.0e-50 201.4 318 37.7
arahy.Tifrunner.gnm1.ann1.8578L4 Arachis hypogaea HOM05D004963 ORTHO05D006638 2.0e-49 200.3 315 38.4
EL10Ac6g14083 Beta vulgaris HOM05D004963 ORTHO05D006638 2.6e-49 199.9 316 36.4
DCAR_001439 Daucus carota HOM05D004963 ORTHO05D006638 7.6e-49 198.4 317 36.6
Zm00001eb096130 Zea mays HOM05D004963 ORTHO05D006638 7.6e-49 198.4 317 37.5
arahy.Tifrunner.gnm1.ann1.WBLX3G Arachis hypogaea HOM05D004963 ORTHO05D006638 1.7e-48 197.2 315 37.1
MSTRG.3144 Avicennia marina HOM05D004963 ORTHO05D006638 2.9e-48 196.4 313 37.1
Ah.03g137060 Amaranthus hybridus HOM05D004963 ORTHO05D006638 3.8e-48 196.1 315 36.5
SalBow1G1005 Salvia bowleyana HOM05D004963 ORTHO05D006638 2.4e-47 193.4 301 38.2
Os09g0565500 Oryza sativa ssp. japonica HOM05D004963 ORTHO05D006638 2.7e-46 189.9 317 36.3
SGA_v2.0_scaffold18G08276 Striga asiatica HOM05D004963 ORTHO05D006638 8.1e-43 178.3 320 35.9
Migut.H00075 Erythranthe guttata HOM05D004963 ORTHO05D006638 1.1e-42 177.9 281 37.4
FAN11G1562 Fragaria x ananassa HOM05D004963 ORTHO05D006638 1.2e-41 174.5 209 44.5
unitig_748.g6983 Utricularia gibba HOM05D004963 ORTHO05D006638 1.7e-40 170.6 314 34.4
SMO145G0002 Selaginella moellendorffii HOM05D004963 ORTHO05D006638 1.1e-36 157.9 323 34.1
Atru.chr6.2400 Acer truncatum HOM05D004963 ORTHO05D006638 1.4e-34 151.0 146 50.7
Cpa.g.sc108.69 Carica papaya HOM05D004963 ORTHO05D006638 1.4e-34 151.0 213 39.9
FvH4_3g31750 Fragaria vesca HOM05D004963 ORTHO05D006638 4.1e-34 149.4 145 52.4
FvH4_4g00580 Fragaria vesca HOM05D004963 ORTHO05D006638 5.3e-34 149.1 145 51.7
Rhsim10G0016800 Rhododendron simsii HOM05D004963 ORTHO05D006638 2.0e-33 147.1 495 25.7
Pp3c27_1470 Physcomitrium patens HOM05D004963 ORTHO05D006638 4.2e-31 139.4 308 29.2
Mapoly0043s0050 Marchantia polymorpha HOM05D004963 ORTHO05D006638 7.9e-30 135.2 317 30.3
Carub.0007s0778 Capsella rubella HOM05D004963 ORTHO05D006638 1.5e-28 131.0 207 37.2
HPP92_013426 Vanilla planifolia HOM05D004963 ORTHO05D006638 5.9e-25 119.0 149 42.3
Atru.chr6.2399 Acer truncatum HOM05D004963 ORTHO05D006638 1.4e-23 114.4 128 46.9
Psat2g063360 Pisum sativum HOM05D004963 ORTHO05D006638 2.3e-21 107.1 164 37.2
CBR_g4853 Chara braunii HOM05D004963 ORTHO05D006638 1.1e-20 104.8 269 28.6
CBR_g4854 Chara braunii HOM05D004963 ORTHO05D006638 1.5e-17 94.4 296 27.7
DCAR_003836 Daucus carota HOM05D004963 ORTHO05D006638 2.9e-16 90.1 130 43.1
FvH4_1g22462 Fragaria vesca HOM05D004963 ORTHO05D006638 4.2e-15 86.3 79 50.6
SEGI_28921 Sequoiadendron giganteum HOM05D004963 ORTHO05D006638 5.2e-13 79.3 93 40.9
Gohir.D09G029000 Gossypium hirsutum HOM05D004963 ORTHO05D006638 7.0e-10 68.9 89 40.4
Glyma.15G246500 Glycine max HOM05D004963 ORTHO05D006638 8.5e-08 62.0 132 33.3
Carub.0006s0908 Capsella rubella HOM05D004963 ORTHO05D021908 2.5e-07 60.5 127 32.3
Psat4g170200 Pisum sativum HOM05D003662 ORTHO05D001824 6.1e-06 55.8 54 50.0


User provided reference genes

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