Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 5.8e-91 337.8 206 100.0
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 7.4e-78 294.3 206 90.8
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 6.3e-53 211.5 193 73.1
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 1.4e-52 210.3 194 69.6
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 2.6e-51 206.1 188 70.7
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 9.4e-49 197.6 197 66.0
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 2.1e-48 196.4 187 66.8
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 2.7e-48 196.1 171 71.3
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 8.0e-48 194.5 196 65.3
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 8.0e-48 194.5 196 65.3
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 1.4e-47 193.7 167 73.1
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 1.4e-47 193.7 167 72.5
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 1.4e-47 193.7 192 65.6
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 1.4e-47 193.7 192 65.6
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 1.8e-47 193.4 204 65.7
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 2.3e-47 193.0 196 62.8
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 2.3e-47 193.0 190 69.5
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 3.0e-47 192.6 181 69.6
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 3.0e-47 192.6 196 64.8
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 4.0e-47 192.2 201 62.7
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 4.0e-47 192.2 189 67.2
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 5.2e-47 191.8 177 69.5
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 6.7e-47 191.4 195 65.1
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 8.8e-47 191.0 200 67.5
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 1.2e-46 190.7 163 73.6
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 1.2e-46 190.7 199 65.3
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 1.2e-46 190.7 188 66.0
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 1.5e-46 190.3 192 64.6
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 2.6e-46 189.5 202 64.4
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 4.4e-46 188.7 198 63.1
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 5.7e-46 188.3 173 67.6
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 5.7e-46 188.3 154 77.9
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 7.5e-46 188.0 197 64.0
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 9.7e-46 187.6 204 63.2
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 1.3e-45 187.2 197 64.5
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 1.7e-45 186.8 176 70.5
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 2.8e-45 186.0 200 63.5
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 2.8e-45 186.0 179 67.0
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 4.8e-45 185.3 172 68.0
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 4.8e-45 185.3 161 73.3
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 6.3e-45 184.9 196 62.2
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 8.2e-45 184.5 177 66.1
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 1.1e-44 184.1 161 71.4
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 1.4e-44 183.7 198 61.1
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 1.4e-44 183.7 198 61.1
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 1.4e-44 183.7 157 74.5
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 1.8e-44 183.3 180 65.6
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.8e-44 183.3 180 66.1
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.8e-44 183.3 180 65.6
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 2.4e-44 183.0 201 63.7
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 2.4e-44 183.0 197 64.0
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 2.4e-44 183.0 196 64.3
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 3.1e-44 182.6 165 69.1
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 3.1e-44 182.6 191 64.9
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 3.1e-44 182.6 180 65.6
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 4.1e-44 182.2 198 61.6
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 4.1e-44 182.2 158 72.2
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 5.3e-44 181.8 198 60.1
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 5.3e-44 181.8 202 61.4
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 5.3e-44 181.8 154 72.7
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 5.3e-44 181.8 189 65.1
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 5.3e-44 181.8 189 65.1
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 7.0e-44 181.4 173 67.6
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 9.1e-44 181.0 198 61.1
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 9.1e-44 181.0 198 61.1
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 9.1e-44 181.0 168 67.9
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 9.1e-44 181.0 170 69.4
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 9.1e-44 181.0 170 69.4
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 1.2e-43 180.6 189 64.0
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 1.2e-43 180.6 191 62.8
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 1.6e-43 180.3 196 61.2
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 1.6e-43 180.3 196 61.2
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 2.7e-43 179.5 203 62.1
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 2.7e-43 179.5 175 67.4
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 3.5e-43 179.1 192 60.9
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 3.5e-43 179.1 146 78.1
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 4.5e-43 178.7 195 61.5
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 7.7e-43 177.9 192 59.9
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 1.0e-42 177.6 149 75.8
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 1.0e-42 177.6 196 61.7
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.3e-42 177.2 151 74.8
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 1.7e-42 176.8 195 59.5
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 2.2e-42 176.4 203 58.6
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 2.9e-42 176.0 149 75.2
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 2.9e-42 176.0 162 70.4
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 5.0e-42 175.3 202 60.9
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 6.5e-42 174.9 195 59.0
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 6.5e-42 174.9 194 62.4
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 8.5e-42 174.5 161 72.0
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 1.1e-41 174.1 201 61.7
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 4.2e-41 172.2 150 74.7
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 1.2e-40 170.6 148 72.3
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 1.2e-40 170.6 189 59.8
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 1.2e-40 170.6 196 60.7
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 2.1e-40 169.9 196 59.2
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 1.8e-39 166.8 167 64.1
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 2.3e-39 166.4 195 59.5
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 4.0e-39 165.6 198 56.6
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 2.0e-38 163.3 193 57.0
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 5.7e-38 161.8 188 60.1
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 1.7e-37 160.2 169 64.5
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 6.3e-37 158.3 188 60.1
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 9.1e-36 154.5 134 71.6
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 1.6e-35 153.7 161 62.7
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 3.5e-35 152.5 206 52.9
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 2.5e-33 146.4 193 56.5
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 6.8e-31 138.3 180 56.7
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 6.3e-29 131.7 182 53.8
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 9.2e-28 127.9 159 59.1
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 6.6e-26 121.7 158 58.2
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 3.3e-25 119.4 104 62.5
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 7.3e-25 118.2 156 55.8
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 1.5e-22 110.5 150 54.7
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 3.2e-20 102.8 184 46.7
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 2.7e-19 99.8 131 48.9
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 1.0e-18 97.8 95 52.6
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.1e-17 94.4 141 52.5
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 1.5e-17 94.0 140 52.9
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 1.4e-15 87.4 110 50.9
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 4.0e-15 85.9 121 49.6
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.9e-09 67.0 161 41.6


User provided reference genes

Program Settings