Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 1.8e-87 325.9 162 100.0
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 2.4e-39 166.0 150 54.0
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 2.7e-35 152.5 155 49.7
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 2.3e-34 149.4 156 48.7
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 2.6e-33 146.0 156 48.1
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 4.4e-33 145.2 150 47.3
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 9.7e-33 144.1 156 46.2
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 8.2e-32 141.0 149 45.6
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 2.4e-31 139.4 150 47.3
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 2.4e-31 139.4 156 46.2
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 7.0e-31 137.9 150 48.7
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 9.1e-31 137.5 150 46.7
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 5.9e-30 134.8 159 44.0
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.9e-29 132.5 150 44.7
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 8.5e-29 131.0 156 44.2
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 1.1e-28 130.6 156 43.6
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 1.1e-28 130.6 150 45.3
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 2.5e-28 129.4 150 44.0
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.5e-28 129.4 150 44.0
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 2.5e-28 129.4 149 47.7
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 2.5e-28 129.4 150 44.0
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 3.2e-28 129.0 151 46.4
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 7.2e-28 127.9 151 42.4
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 9.4e-28 127.5 150 43.3
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 9.4e-28 127.5 148 43.2
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 1.2e-27 127.1 151 45.0
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 2.1e-27 126.3 140 44.3
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 2.7e-27 125.9 150 42.0
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 2.7e-27 125.9 149 45.6
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 4.7e-27 125.2 146 41.1
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 6.1e-27 124.8 146 43.8
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 2.3e-26 122.9 150 42.0
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 2.3e-26 122.9 156 39.1
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 1.1e-25 120.6 156 38.5
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 1.5e-25 120.2 148 42.6
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 2.0e-25 119.8 146 41.8
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 2.0e-25 119.8 151 45.7
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 2.6e-25 119.4 157 44.6
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 2.6e-25 119.4 146 45.2
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 5.7e-25 118.2 149 40.3
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 5.7e-25 118.2 151 45.0
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 5.7e-25 118.2 168 36.3
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 5.7e-25 118.2 145 44.1
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 5.7e-25 118.2 145 42.8
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 9.7e-25 117.5 157 38.9
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 9.7e-25 117.5 150 39.3
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 3.7e-24 115.5 150 39.3
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 4.8e-24 115.2 151 37.1
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 4.8e-24 115.2 150 39.3
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 5.3e-23 111.7 141 39.7
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 7.0e-23 111.3 149 41.6
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 1.7e-21 106.7 150 34.7
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 1.1e-20 104.0 150 39.3
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 1.5e-20 103.6 167 36.5
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.9e-20 103.2 146 39.7
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 3.2e-20 102.4 147 35.4
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 9.4e-20 100.9 153 35.9
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 1.6e-19 100.1 146 38.4
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.6e-19 100.1 146 38.4
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 2.1e-19 99.8 146 38.4
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 3.6e-19 99.0 154 35.7
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 6.1e-19 98.2 141 39.0
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 6.1e-19 98.2 149 39.6
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 1.0e-18 97.4 148 37.2
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 1.4e-18 97.1 147 33.3
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 1.8e-18 96.7 147 39.5
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 3.0e-18 95.9 146 33.6
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 1.2e-17 94.0 141 36.2
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.0e-17 93.2 91 44.0
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 3.4e-17 92.4 158 37.3
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 5.7e-17 91.7 144 35.4
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 5.7e-17 91.7 144 33.3
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 7.5e-17 91.3 147 35.4
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.3e-16 90.5 142 34.5
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 6.3e-16 88.2 144 37.5
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 1.8e-15 86.7 152 32.2
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 2.4e-15 86.3 160 33.1
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 2.4e-15 86.3 143 35.0
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 3.1e-15 85.9 112 36.6
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 9.1e-15 84.3 159 32.1
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 3.5e-14 82.4 71 46.5
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 7.7e-14 81.3 145 32.4
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 2.7e-11 72.8 87 36.8
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 4.7e-11 72.0 162 31.5
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 8.0e-11 71.2 85 38.8
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 8.0e-11 71.2 85 38.8
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.2e-09 67.4 103 41.7
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 7.5e-09 64.7 67 41.8
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 5.4e-07 58.5 81 39.5
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 5.4e-07 58.5 79 38.0
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 9.2e-07 57.8 77 40.3
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 1.6e-06 57.0 151 29.8
MD07G1251800 Malus domestica HOM05D007633 ORTHO05D008817 1.6e-06 57.0 74 37.8
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 2.0e-06 56.6 84 38.1
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 4.5e-06 55.5 80 37.5
Os10g0430800 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 5.9e-06 55.1 151 28.5


User provided reference genes

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