Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 1.7e-73 279.3 140 100.0
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 2.2e-65 252.3 140 90.7
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 3.2e-40 168.7 141 66.0
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 1.6e-39 166.4 144 63.9
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.6e-39 166.4 141 65.2
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 2.1e-39 166.0 101 81.2
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 6.6e-38 161.0 101 79.2
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 2.5e-37 159.1 102 80.4
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 2.5e-37 159.1 131 61.1
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 3.3e-37 158.7 94 80.9
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 4.3e-37 158.3 102 77.5
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 4.3e-37 158.3 96 81.2
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 7.3e-37 157.5 95 82.1
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 7.3e-37 157.5 90 84.4
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 9.6e-37 157.1 93 82.8
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 9.6e-37 157.1 96 80.2
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 9.6e-37 157.1 91 82.4
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 1.3e-36 156.8 96 83.3
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 1.3e-36 156.8 96 78.1
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 1.6e-36 156.4 94 79.8
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 2.1e-36 156.0 118 66.1
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 2.8e-36 155.6 101 76.2
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.8e-36 155.6 98 80.6
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 2.8e-36 155.6 104 74.0
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 3.6e-36 155.2 106 75.5
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 3.6e-36 155.2 95 78.9
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 3.6e-36 155.2 125 64.8
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 3.6e-36 155.2 148 58.8
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 3.6e-36 155.2 118 66.9
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 4.8e-36 154.8 101 74.3
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 4.8e-36 154.8 96 79.2
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 4.8e-36 154.8 118 64.4
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 6.2e-36 154.5 112 68.8
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 6.2e-36 154.5 89 85.4
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 6.2e-36 154.5 90 81.1
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 8.1e-36 154.1 132 58.3
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 8.1e-36 154.1 99 78.8
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 8.1e-36 154.1 140 60.0
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 8.1e-36 154.1 94 78.7
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 1.4e-35 153.3 96 76.0
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 1.4e-35 153.3 106 70.8
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.8e-35 152.9 104 76.9
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 1.8e-35 152.9 104 72.1
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 1.8e-35 152.9 142 58.5
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 2.4e-35 152.5 93 79.6
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.4e-35 152.5 107 71.0
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 2.4e-35 152.5 96 79.2
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 3.1e-35 152.1 104 74.0
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 3.1e-35 152.1 99 73.7
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 4.0e-35 151.8 101 73.3
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 4.0e-35 151.8 94 78.7
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 6.9e-35 151.0 93 79.6
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 1.2e-34 150.2 90 81.1
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 1.2e-34 150.2 112 68.8
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 1.2e-34 150.2 106 68.9
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 1.5e-34 149.8 104 73.1
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 2.0e-34 149.4 89 78.7
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.6e-34 149.1 102 72.5
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 2.6e-34 149.1 89 78.7
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 2.6e-34 149.1 94 77.7
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 3.4e-34 148.7 140 58.6
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 3.4e-34 148.7 94 75.5
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 4.5e-34 148.3 92 77.2
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 5.8e-34 147.9 130 60.0
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 5.8e-34 147.9 88 80.7
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 5.8e-34 147.9 88 80.7
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 5.8e-34 147.9 95 73.7
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 7.6e-34 147.5 95 73.7
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 9.9e-34 147.1 90 80.0
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 9.9e-34 147.1 90 80.0
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 9.9e-34 147.1 90 80.0
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 9.9e-34 147.1 90 80.0
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 1.3e-33 146.7 92 76.1
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 1.3e-33 146.7 84 82.1
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 1.7e-33 146.4 95 72.6
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.7e-33 146.4 95 72.6
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 1.7e-33 146.4 92 77.2
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 2.2e-33 146.0 95 76.8
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.8e-33 145.2 95 72.6
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 3.8e-33 145.2 108 65.7
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 3.8e-33 145.2 93 76.3
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 6.4e-33 144.4 82 85.4
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 6.4e-33 144.4 100 71.0
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 8.4e-33 144.1 93 69.9
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 1.4e-32 143.3 106 71.7
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.9e-32 142.9 131 54.2
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 2.4e-32 142.5 84 78.6
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 3.2e-32 142.1 90 76.7
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 3.2e-32 142.1 95 71.6
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 5.4e-32 141.4 130 56.9
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 1.2e-31 140.2 82 81.7
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 1.6e-31 139.8 92 73.9
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 1.6e-31 139.8 83 81.9
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 2.1e-31 139.4 94 72.3
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 2.7e-31 139.0 86 77.9
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 4.6e-31 138.3 87 75.9
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 7.9e-31 137.5 90 73.3
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 7.9e-31 137.5 83 78.3
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.3e-30 136.7 84 79.8
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 2.3e-30 136.0 90 73.3
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 1.9e-29 132.9 87 73.6
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.2e-26 123.6 100 62.0
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 2.5e-21 105.9 91 61.5
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 1.9e-16 89.7 46 87.0
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 4.2e-16 88.6 84 57.1
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 2.4e-11 72.8 82 47.6
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 8.5e-09 64.3 59 61.0


User provided reference genes

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