Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0992 Ceratophyllum demersum HOM05D004168 ORTHO05D004999 5.0e-66 254.2 121 100.0
CDE06G0679 Ceratophyllum demersum HOM05D004168 ORTHO05D004999 1.9e-41 172.6 112 78.6
Aqoxy1G00522 Aquilegia oxysepala HOM05D004168 ORTHO05D004999 1.4e-12 76.6 69 53.6
MBI15_g10497_MAGBIO Magnolia biondii HOM05D004168 ORTHO05D004999 7.1e-12 74.3 113 38.9
vmacro21519 Vaccinium macrocarpon HOM05D004168 ORTHO05D004999 7.8e-11 70.9 74 44.6
PSO339G0184 Papaver somniferum HOM05D004168 ORTHO05D004999 1.0e-10 70.5 80 43.8
TAR628G1263 Trochodendron aralioides HOM05D004168 ORTHO05D004999 2.3e-10 69.3 74 43.2
PSO384G0569 Papaver somniferum HOM05D004168 ORTHO05D004999 3.9e-10 68.6 80 42.5
TAR376G0672 Trochodendron aralioides HOM05D004168 ORTHO05D004999 1.1e-09 67.0 68 47.1
FAN20G1800 Fragaria x ananassa HOM05D004168 ORTHO05D004999 1.9e-09 66.2 69 47.8
FAN15G2652 Fragaria x ananassa HOM05D004168 ORTHO05D004999 2.5e-09 65.9 69 47.8
RcHm_v2.0_Chr6g0307961 Rosa chinensis HOM05D004168 ORTHO05D004999 2.5e-09 65.9 69 49.3
Actinidia29872 Actinidia chinensis HOM05D004168 ORTHO05D004999 4.3e-09 65.1 74 43.2
FvH4_2g34410 Fragaria vesca HOM05D004168 ORTHO05D004999 4.3e-09 65.1 69 46.4
FAN24G2672 Fragaria x ananassa HOM05D004168 ORTHO05D004999 4.3e-09 65.1 69 46.4
Actinidia38059 Actinidia chinensis HOM05D004168 ORTHO05D004999 5.6e-09 64.7 74 43.2
Rhsim06G0050100 Rhododendron simsii HOM05D004168 ORTHO05D004999 9.5e-09 63.9 74 44.6
CSS0013402 Camellia sinensis var. sinensis HOM05D004168 ORTHO05D004999 1.2e-08 63.5 76 43.4
Rhsim07G0228300 Rhododendron simsii HOM05D004168 ORTHO05D004999 1.2e-08 63.5 78 43.6
THA.LOC104812820 Tarenaya hassleriana HOM05D004168 ORTHO05D004999 2.1e-08 62.8 71 47.9
AT4G17650 Arabidopsis thaliana HOM05D004168 ORTHO05D004999 6.2e-08 61.2 60 46.7
Aqoxy2G00574 Aquilegia oxysepala HOM05D004168 ORTHO05D004999 8.1e-08 60.8 82 40.2
CAN.G1030.1 Capsicum annuum HOM05D004168 ORTHO05D004999 8.1e-08 60.8 39 69.2
PGR083G0647 Punica granatum HOM05D004168 ORTHO05D004999 8.1e-08 60.8 114 32.5
CSS0011562 Camellia sinensis var. sinensis HOM05D004168 ORTHO05D004999 1.1e-07 60.5 37 64.9
Ciclev10002229m.g Citrus clementina HOM05D004168 ORTHO05D004999 1.1e-07 60.5 37 67.6
GSVIVG01024177001 Vitis vinifera HOM05D004168 ORTHO05D004999 1.1e-07 60.5 38 68.4
Haze_17522 Corylus avellana HOM05D004168 ORTHO05D004999 1.4e-07 60.1 52 51.9
Sed0010101 Sechium edule HOM05D004168 ORTHO05D004999 1.4e-07 60.1 36 66.7
vmacro04448 Vaccinium macrocarpon HOM05D004168 ORTHO05D004999 1.4e-07 60.1 78 42.3
AL7G36940 Arabidopsis lyrata HOM05D004168 ORTHO05D004999 1.8e-07 59.7 60 46.7
ClCG05G019900 Citrullus lanatus HOM05D004168 ORTHO05D004999 1.8e-07 59.7 70 42.9
DCAR_008795 Daucus carota HOM05D004168 ORTHO05D004999 1.8e-07 59.7 73 39.7
MD08G1101200 Malus domestica HOM05D004168 ORTHO05D004999 1.8e-07 59.7 93 36.6
GSVIVG01009491001 Vitis vinifera HOM05D004168 ORTHO05D004999 1.8e-07 59.7 107 38.3
Duzib093G1913 Durio zibethinus HOM05D004168 ORTHO05D004999 2.3e-07 59.3 115 33.9
Nitab4.5_0000287g0250 Nicotiana tabacum HOM05D004168 ORTHO05D004999 4.0e-07 58.5 39 64.1
DCAR_012778 Daucus carota HOM05D004168 ORTHO05D004999 6.8e-07 57.8 34 70.6
Cfa018557 Carpinus fangiana HOM05D004168 ORTHO05D004999 8.9e-07 57.4 52 50.0
Gohir.D05G205800 Gossypium hirsutum HOM05D004168 ORTHO05D004999 8.9e-07 57.4 77 39.0
Oeu043572.2 Olea europaea HOM05D004168 ORTHO05D004999 8.9e-07 57.4 34 67.6
CANSAT25G0219 Cannabis sativa HOM05D004168 ORTHO05D004999 1.2e-06 57.0 36 66.7
Gorai.009G212100 Gossypium raimondii HOM05D004168 ORTHO05D004999 1.2e-06 57.0 77 39.0
Nitab4.5_0002760g0060 Nicotiana tabacum HOM05D004168 ORTHO05D004999 1.2e-06 57.0 39 64.1
Potri.002G126000 Populus trichocarpa HOM05D004168 ORTHO05D004999 1.2e-06 57.0 70 40.0
Sc02g0007150 Simmondsia chinensis HOM05D004168 ORTHO05D004999 1.2e-06 57.0 35 71.4
PGSC0003DMG401007971 Solanum tuberosum HOM05D004168 ORTHO05D004999 1.2e-06 57.0 39 64.1
CiPaw.11G099200 Carya illinoinensis HOM05D004168 ORTHO05D004999 1.5e-06 56.6 36 63.9
COL.COLO4_26513 Corchorus olitorius HOM05D004168 ORTHO05D004999 1.5e-06 56.6 72 38.9
Gohir.A05G202600 Gossypium hirsutum HOM05D004168 ORTHO05D004999 1.5e-06 56.6 77 39.0
Solyc04g078890.4 Solanum lycopersicum HOM05D004168 ORTHO05D004999 1.5e-06 56.6 39 64.1
Sopen04g032490 Solanum pennellii HOM05D004168 ORTHO05D004999 1.5e-06 56.6 39 64.1
Gohir.A06G018666 Gossypium hirsutum HOM05D004168 ORTHO05D004999 2.0e-06 56.2 118 33.1
Lj4A773T42 Lonicera japonica HOM05D004168 ORTHO05D004999 2.0e-06 56.2 34 67.6
Hund00296 Selenicereus undatus HOM05D004168 ORTHO05D004999 2.0e-06 56.2 76 40.8
Hund00303 Selenicereus undatus HOM05D004168 ORTHO05D004999 2.0e-06 56.2 76 40.8
unitig_19.g30012 Utricularia gibba HOM05D004168 ORTHO05D004999 2.0e-06 56.2 47 53.2
unitig_8.g5020 Utricularia gibba HOM05D004168 ORTHO05D004999 2.0e-06 56.2 47 53.2
Lsat_1_v5_gn_4_125661 Lactuca sativa HOM05D004168 ORTHO05D004999 2.6e-06 55.8 53 49.1
Peaxi162Scf00252g00056 Petunia axillaris HOM05D004168 ORTHO05D004999 2.6e-06 55.8 62 50.0
Prupe.1G435200 Prunus persica HOM05D004168 ORTHO05D004999 2.6e-06 55.8 78 38.5
PGR031G2881 Punica granatum HOM05D004168 ORTHO05D004999 2.6e-06 55.8 121 33.9
Thecc.08G006900 Theobroma cacao HOM05D004168 ORTHO05D004999 2.6e-06 55.8 118 33.1
Carub.0007s2373 Capsella rubella HOM05D004168 ORTHO05D004999 3.4e-06 55.5 35 71.4
MD15G1082400 Malus domestica HOM05D004168 ORTHO05D004999 3.4e-06 55.5 55 50.9
TWI36G1266 Tripterygium wilfordii HOM05D004168 ORTHO05D004999 3.4e-06 55.5 34 64.7
CARHR224370 Cardamine hirsuta HOM05D004168 ORTHO05D004999 4.4e-06 55.1 57 47.4
Cpa.g.sc13.291 Carica papaya HOM05D004168 ORTHO05D004999 4.4e-06 55.1 69 43.5
Gohir.D06G017000 Gossypium hirsutum HOM05D004168 ORTHO05D004999 4.4e-06 55.1 118 32.2
Gorai.010G019900 Gossypium raimondii HOM05D004168 ORTHO05D004999 4.4e-06 55.1 118 32.2
MSTRG.1350 Avicennia marina HOM05D004168 ORTHO05D004999 5.8e-06 54.7 33 66.7
Lj1g0018004 Lotus japonicus HOM05D004168 ORTHO05D004999 5.8e-06 54.7 36 69.4
BcaNung06715 Brassica carinata HOM05D004168 ORTHO05D004999 7.6e-06 54.3 56 46.4
Eucgr.F00224 Eucalyptus grandis HOM05D004168 ORTHO05D004999 7.6e-06 54.3 34 64.7
Os01g0772400 Oryza sativa ssp. japonica HOM05D004168 ORTHO05D004999 7.6e-06 54.3 33 66.7
Sp7g16490 Schrenkiella parvula HOM05D004168 ORTHO05D004999 7.6e-06 54.3 42 59.5
AUR62011389 Chenopodium quinoa HOM05D004168 ORTHO05D004999 9.9e-06 53.9 77 42.9
Cc10_g04130 Coffea canephora HOM05D004168 ORTHO05D004999 9.9e-06 53.9 33 66.7


User provided reference genes

Program Settings