Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0950 Ceratophyllum demersum HOM05D005320 ORTHO05D007922 6.7e-167 590.5 278 100.0
CDE06G1896 Ceratophyllum demersum HOM05D005320 ORTHO05D007922 7.5e-126 454.1 227 95.2
Nn2g11189 Nelumbo nucifera HOM05D005320 ORTHO05D007922 3.8e-109 398.7 222 82.9
PSO339G2759 Papaver somniferum HOM05D005320 ORTHO05D007922 2.4e-108 396.0 215 85.6
Gohir.A04G083900 Gossypium hirsutum HOM05D005320 ORTHO05D007922 9.2e-108 394.0 215 83.7
Actinidia05326 Actinidia chinensis HOM05D005320 ORTHO05D007922 1.2e-107 393.7 215 84.7
PSO063G2683 Papaver somniferum HOM05D005320 ORTHO05D007922 1.6e-107 393.3 215 85.1
GSVIVG01034127001 Vitis vinifera HOM05D005320 ORTHO05D007922 2.7e-107 392.5 215 83.7
Aqoxy1G00876 Aquilegia oxysepala HOM05D005320 ORTHO05D007922 4.6e-107 391.7 218 83.5
Dinv35573 Davidia involucrata HOM05D005320 ORTHO05D007922 4.6e-107 391.7 215 82.8
Gohir.D04G122700 Gossypium hirsutum HOM05D005320 ORTHO05D007922 4.6e-107 391.7 215 83.3
MD04G1133400 Malus domestica HOM05D005320 ORTHO05D007922 4.6e-107 391.7 215 84.2
Thecc.05G035400 Theobroma cacao HOM05D005320 ORTHO05D007922 6.0e-107 391.3 216 84.3
CSS0049441 Camellia sinensis var. sinensis HOM05D005320 ORTHO05D007922 1.0e-106 390.6 219 82.2
MD12G1146200 Malus domestica HOM05D005320 ORTHO05D007922 1.7e-106 389.8 245 74.7
Hma1.2p1_1082F.1_g255150 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 3.0e-106 389.0 216 83.3
Manes.09G092200 Manihot esculenta HOM05D005320 ORTHO05D007922 3.9e-106 388.7 215 83.7
Gorai.012G105600 Gossypium raimondii HOM05D005320 ORTHO05D007922 5.1e-106 388.3 219 82.2
Rhsim05G0195000 Rhododendron simsii HOM05D005320 ORTHO05D007922 5.1e-106 388.3 215 82.8
CiPaw.09G195900 Carya illinoinensis HOM05D005320 ORTHO05D007922 6.6e-106 387.9 215 82.8
MBI05_g35634_MAGBIO Magnolia biondii HOM05D005320 ORTHO05D007922 8.7e-106 387.5 216 84.3
Nitab4.5_0000770g0150 Nicotiana tabacum HOM05D005320 ORTHO05D007922 1.1e-105 387.1 216 83.8
QL07p030104 Quercus lobata HOM05D005320 ORTHO05D007922 3.3e-105 385.6 214 81.8
QL07p030908 Quercus lobata HOM05D005320 ORTHO05D007922 3.3e-105 385.6 214 81.8
PGR031G0341 Punica granatum HOM05D005320 ORTHO05D007922 4.3e-105 385.2 215 82.3
Ciclev10012735m.g Citrus clementina HOM05D005320 ORTHO05D007922 9.6e-105 384.0 215 81.4
COL.COLO4_14757 Corchorus olitorius HOM05D005320 ORTHO05D007922 1.2e-104 383.6 215 82.3
TAR623G0888 Trochodendron aralioides HOM05D005320 ORTHO05D007922 1.2e-104 383.6 200 87.5
Prupe.6G259400 Prunus persica HOM05D005320 ORTHO05D007922 2.1e-104 382.9 215 82.3
SGA_v2.0_scaffold126G33759 Striga asiatica HOM05D005320 ORTHO05D007922 2.8e-104 382.5 215 81.4
Sc07g0007050 Simmondsia chinensis HOM05D005320 ORTHO05D007922 4.7e-104 381.7 213 81.7
Dinv37147 Davidia involucrata HOM05D005320 ORTHO05D007922 6.2e-104 381.3 237 75.5
Migut.J00304 Erythranthe guttata HOM05D005320 ORTHO05D007922 8.1e-104 380.9 215 80.5
TWI74G0393 Tripterygium wilfordii HOM05D005320 ORTHO05D007922 8.1e-104 380.9 215 81.9
unitig_21.g21010 Utricularia gibba HOM05D005320 ORTHO05D007922 8.1e-104 380.9 215 80.9
MSTRG.19072 Avicennia marina HOM05D005320 ORTHO05D007922 2.4e-103 379.4 215 81.4
Glyma.03G068800 Glycine max HOM05D005320 ORTHO05D007922 4.0e-103 378.6 217 81.6
arahy.Tifrunner.gnm1.ann1.AE34S8 Arachis hypogaea HOM05D005320 ORTHO05D007922 6.9e-103 377.9 216 81.0
Cc06_g02320 Coffea canephora HOM05D005320 ORTHO05D007922 9.0e-103 377.5 215 80.9
vmacro20179 Vaccinium macrocarpon HOM05D005320 ORTHO05D007922 9.0e-103 377.5 231 76.2
CANSAT35G1431 Cannabis sativa HOM05D005320 ORTHO05D007922 1.5e-102 376.7 216 81.0
arahy.Tifrunner.gnm1.ann1.SHW8SI Arachis hypogaea HOM05D005320 ORTHO05D007922 2.0e-102 376.3 216 80.6
Glyma.01G100200 Glycine max HOM05D005320 ORTHO05D007922 2.6e-102 375.9 218 80.3
CAN.G324.16 Capsicum annuum HOM05D005320 ORTHO05D007922 3.4e-102 375.6 216 81.9
Lalb_Chr01g0013501 Lupinus albus HOM05D005320 ORTHO05D007922 7.6e-102 374.4 215 80.9
Ca_20076_v3 Cicer arietinum L. HOM05D005320 ORTHO05D007922 2.9e-101 372.5 217 79.7
Sp4g20060 Schrenkiella parvula HOM05D005320 ORTHO05D007922 2.9e-101 372.5 216 79.6
Lsat_1_v5_gn_5_153940 Lactuca sativa HOM05D005320 ORTHO05D007922 3.8e-101 372.1 215 80.9
Atru.chr8.2015 Acer truncatum HOM05D005320 ORTHO05D007922 4.9e-101 371.7 216 80.6
Sopen10g034290 Solanum pennellii HOM05D005320 ORTHO05D007922 4.9e-101 371.7 216 81.5
HanXRQChr13g0406901 Helianthus annuus HOM05D005320 ORTHO05D007922 6.4e-101 371.3 215 80.5
Solyc10g084850.2 Solanum lycopersicum HOM05D005320 ORTHO05D007922 6.4e-101 371.3 216 81.5
PGSC0003DMG400011070 Solanum tuberosum HOM05D005320 ORTHO05D007922 6.4e-101 371.3 216 81.5
Thhalv10017226m.g Eutrema salsugineum HOM05D005320 ORTHO05D007922 8.4e-101 370.9 216 79.2
AL4G34610 Arabidopsis lyrata HOM05D005320 ORTHO05D007922 1.9e-100 369.8 216 78.7
AT2G37680 Arabidopsis thaliana HOM05D005320 ORTHO05D007922 1.9e-100 369.8 216 78.7
THA.LOC104823414 Tarenaya hassleriana HOM05D005320 ORTHO05D007922 1.9e-100 369.8 216 79.2
ClCG04G008030 Citrullus lanatus HOM05D005320 ORTHO05D007922 2.4e-100 369.4 215 80.0
Lj3A964T54 Lonicera japonica HOM05D005320 ORTHO05D007922 3.2e-100 369.0 200 84.0
BcaB06g29019 Brassica carinata HOM05D005320 ORTHO05D007922 4.2e-100 368.6 216 78.7
Medtr4g020460 Medicago truncatula HOM05D005320 ORTHO05D007922 4.2e-100 368.6 217 79.3
TPR.G17890 Trifolium pratense HOM05D005320 ORTHO05D007922 4.2e-100 368.6 218 78.9
Psat7g239840 Pisum sativum HOM05D005320 ORTHO05D007922 9.3e-100 367.5 217 78.3
VMungo0331G1509 Vigna mungo HOM05D005320 ORTHO05D007922 9.3e-100 367.5 210 80.0
ECA248G2752 Erigeron canadensis HOM05D005320 ORTHO05D007922 1.2e-99 367.1 216 80.6
Os03g0679000 Oryza sativa ssp. japonica HOM05D005320 ORTHO05D007922 1.2e-99 367.1 219 77.6
RcHm_v2.0_Chr3g0466041 Rosa chinensis HOM05D005320 ORTHO05D007922 1.2e-99 367.1 216 80.1
BcaC02g07499 Brassica carinata HOM05D005320 ORTHO05D007922 1.6e-99 366.7 216 78.2
Potri.016G100600 Populus trichocarpa HOM05D005320 ORTHO05D007922 1.6e-99 366.7 225 76.9
CARHR131860 Cardamine hirsuta HOM05D005320 ORTHO05D007922 2.7e-99 365.9 217 78.8
CsaV3_4G025180 Cucumis sativus L. HOM05D005320 ORTHO05D007922 4.6e-99 365.2 215 79.1
Lj3g0008944 Lotus japonicus HOM05D005320 ORTHO05D007922 1.3e-98 363.6 216 79.2
BraA04t18363Z Brassica rapa HOM05D005320 ORTHO05D007922 5.1e-98 361.7 216 77.3
Carub.0004s1963 Capsella rubella HOM05D005320 ORTHO05D007922 1.9e-97 359.8 217 77.0
FAN02G2927 Fragaria x ananassa HOM05D005320 ORTHO05D007922 2.5e-97 359.4 216 78.2
Os01g0144200 Oryza sativa ssp. japonica HOM05D005320 ORTHO05D007922 3.3e-97 359.0 219 76.3
FvH4_6g13220 Fragaria vesca HOM05D005320 ORTHO05D007922 5.6e-97 358.2 216 77.8
Peaxi162Scf00094g00911 Petunia axillaris HOM05D005320 ORTHO05D007922 1.1e-95 354.0 182 88.5
Sed0022090 Sechium edule HOM05D005320 ORTHO05D007922 1.1e-95 354.0 215 79.1
Aa31sc70G70 Aethionema arabicum HOM05D005320 ORTHO05D007922 4.0e-95 352.1 218 77.5
DCAR_012114 Daucus carota HOM05D005320 ORTHO05D007922 1.5e-94 350.1 220 75.0
Eucgr.K01475 Eucalyptus grandis HOM05D005320 ORTHO05D007922 1.5e-94 350.1 241 69.7
FAN14G1919 Fragaria x ananassa HOM05D005320 ORTHO05D007922 2.0e-94 349.7 200 80.0
CSS0000536 Camellia sinensis var. sinensis HOM05D005320 ORTHO05D007922 4.5e-94 348.6 196 80.6
BolC4t28116H Brassica oleracea HOM05D005320 ORTHO05D007922 5.8e-94 348.2 211 75.8
Duzib128G0467 Durio zibethinus HOM05D005320 ORTHO05D007922 1.7e-93 346.7 188 83.5
C04p66130 Brassica napus HOM05D005320 ORTHO05D007922 6.4e-93 344.7 203 77.3
A04p28870 Brassica napus HOM05D005320 ORTHO05D007922 1.1e-92 344.0 214 74.3
Phvul.010G015600 Phaseolus vulgaris HOM05D005320 ORTHO05D007922 1.4e-92 343.6 188 83.0
Nitab4.5_0005100g0070 Nicotiana tabacum HOM05D005320 ORTHO05D007922 3.2e-92 342.4 190 83.2
Duzib093G0721 Durio zibethinus HOM05D005320 ORTHO05D007922 1.2e-91 340.5 189 82.5
Oeu007799.1 Olea europaea HOM05D005320 ORTHO05D007922 1.2e-91 340.5 186 83.3
AUR62043523 Chenopodium quinoa HOM05D005320 ORTHO05D007922 2.1e-91 339.7 176 86.9
RcHm_v2.0_Chr3g0466001 Rosa chinensis HOM05D005320 ORTHO05D007922 2.7e-91 339.3 199 79.4
Atru.chr8.2014 Acer truncatum HOM05D005320 ORTHO05D007922 6.0e-91 338.2 190 81.6
AUR62042382 Chenopodium quinoa HOM05D005320 ORTHO05D007922 1.0e-90 337.4 177 85.9
HPP92_026786 Vanilla planifolia HOM05D005320 ORTHO05D007922 1.0e-90 337.4 196 78.6
FAN05G0090 Fragaria x ananassa HOM05D005320 ORTHO05D007922 1.1e-89 334.0 190 79.5
Zm00001eb124510 Zea mays HOM05D005320 ORTHO05D007922 3.7e-88 328.9 192 78.6
ATR0559G120 Amborella trichopoda HOM05D005320 ORTHO05D007922 1.8e-87 326.6 188 79.3
SMO356G0269 Selaginella moellendorffii HOM05D005320 ORTHO05D007922 1.9e-84 316.6 197 71.1
Mapoly0038s0068 Marchantia polymorpha HOM05D005320 ORTHO05D007922 1.6e-83 313.5 197 69.0
Pp3c6_13830 Physcomitrium patens HOM05D005320 ORTHO05D007922 2.5e-81 306.2 216 64.4
AagrBONN_evm.TU.Sc2ySwM_117.2668 Anthoceros agrestis HOM05D005320 ORTHO05D007922 1.3e-80 303.9 197 68.0
CBR_g30417 Chara braunii HOM05D005320 ORTHO05D007922 8.7e-74 281.2 200 63.0
Cpa.g.c45575 Carica papaya HOM05D005320 ORTHO05D007922 3.3e-73 279.3 145 86.9
Hma1.2p1_0936F.1_g239015 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 2.8e-72 276.2 170 76.5
Hma1.2p1_1082F.1_g255160 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 2.8e-72 276.2 170 76.5
Zm00001eb335820 Zea mays HOM05D005320 ORTHO05D007922 3.7e-72 275.8 145 85.5
EL10As1g23111 Beta vulgaris HOM05D005320 ORTHO05D007922 7.9e-67 258.1 133 87.2
Sabra16G0101600 Salix brachista HOM05D005320 ORTHO05D007922 8.2e-64 248.1 133 84.2
RcHm_v2.0_Chr3g0465971 Rosa chinensis HOM05D005320 ORTHO05D007922 3.1e-63 246.1 133 83.5
HPP92_000741 Vanilla planifolia HOM05D005320 ORTHO05D007922 1.8e-58 230.3 130 79.2
Haze_20829 Corylus avellana HOM05D005320 ORTHO05D007922 1.1e-57 227.6 131 78.6
Hma1.2p1_1082F.1_g255140 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 2.0e-54 216.9 125 77.6
RcHm_v2.0_Chr3g0465901 Rosa chinensis HOM05D005320 ORTHO05D007922 1.0e-50 204.5 142 67.6
Hma1.2p1_0766F.1_g215380 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 6.5e-45 185.3 106 79.2
RcHm_v2.0_Chr3g0465921 Rosa chinensis HOM05D005320 ORTHO05D007922 5.3e-39 165.6 89 85.4
HPP92_000739 Vanilla planifolia HOM05D005320 ORTHO05D007922 3.5e-38 162.9 93 82.8
EL10As1g23112 Beta vulgaris HOM05D005320 ORTHO05D007922 5.4e-31 139.0 86 74.4
Haze_20831 Corylus avellana HOM05D000026 ORTHO05D000094 7.7e-30 135.2 85 71.8
Cre17.g744497 Chlamydomonas reinhardtii HOM05D005320 ORTHO05D007922 3.3e-28 129.8 206 35.9
Mapoly0050s0129 Marchantia polymorpha HOM05D005320 ORTHO05D007922 3.5e-22 109.8 189 35.4
MELO3C003145.2 Cucumis melo HOM05D000231 ORTHO05D000132 3.5e-14 83.2 40 92.5
RcHm_v2.0_Chr4g0436891 Rosa chinensis HOM05D005320 ORTHO05D007922 3.3e-12 76.6 64 60.9
RcHm_v2.0_Chr7g0189661 Rosa chinensis HOM05D005320 ORTHO05D007922 9.5e-12 75.1 63 55.6
Pp3c27_5960 Physcomitrium patens HOM05D005320 ORTHO05D007922 1.6e-06 57.8 47 51.1


User provided reference genes

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