Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0927 Ceratophyllum demersum HOM05D005487 ORTHO05D007280 1.8e-264 915.2 429 100.0
Nn1g07355 Nelumbo nucifera HOM05D005487 ORTHO05D007280 3.5e-199 698.4 432 75.0
TAR724G0004 Trochodendron aralioides HOM05D005487 ORTHO05D007280 3.0e-198 695.3 429 76.0
Cfa000109 Carpinus fangiana HOM05D005487 ORTHO05D007280 2.5e-197 692.2 428 75.9
TAR629G3393 Trochodendron aralioides HOM05D005487 ORTHO05D007280 1.4e-195 686.4 431 74.5
QL05p069756 Quercus lobata HOM05D005487 ORTHO05D007280 3.4e-194 681.8 428 75.2
Duzib192G1033 Durio zibethinus HOM05D005487 ORTHO05D007280 7.6e-194 680.6 427 75.2
MBI19_g29429_MAGBIO Magnolia biondii HOM05D005487 ORTHO05D007280 1.0e-193 680.2 428 75.0
CiPaw.10G077700 Carya illinoinensis HOM05D005487 ORTHO05D007280 2.9e-193 678.7 428 75.0
Nn1g03329 Nelumbo nucifera HOM05D005487 ORTHO05D007280 4.9e-193 677.9 431 74.2
CSS0007892 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 8.4e-193 677.2 429 73.9
Oeu044422.1 Olea europaea HOM05D005487 ORTHO05D007280 4.2e-192 674.9 428 74.1
Thecc.06G232800 Theobroma cacao HOM05D005487 ORTHO05D007280 4.2e-192 674.9 428 74.3
Manes.09G070300 Manihot esculenta HOM05D005487 ORTHO05D007280 5.5e-192 674.5 428 75.0
Hma1.2p1_0135F.1_g061730 Hydrangea macrophylla HOM05D005487 ORTHO05D007280 1.2e-191 673.3 425 74.6
Actinidia26862 Actinidia chinensis HOM05D005487 ORTHO05D007280 6.0e-191 671.0 428 73.8
Actinidia11881 Actinidia chinensis HOM05D005487 ORTHO05D007280 7.9e-191 670.6 426 73.9
Nitab4.5_0000143g0260 Nicotiana tabacum HOM05D005487 ORTHO05D007280 7.9e-191 670.6 428 73.6
TWI38G0871 Tripterygium wilfordii HOM05D005487 ORTHO05D007280 3.0e-190 668.7 428 74.1
Nitab4.5_0001198g0060 Nicotiana tabacum HOM05D005487 ORTHO05D007280 3.9e-190 668.3 428 73.8
PGR004G0814 Punica granatum HOM05D005487 ORTHO05D007280 1.9e-189 666.0 428 73.1
Rhsim13G0146300 Rhododendron simsii HOM05D005487 ORTHO05D007280 1.9e-189 666.0 456 70.0
RhsimUnG0109400 Rhododendron simsii HOM05D005487 ORTHO05D007280 3.3e-189 665.2 456 69.7
Solyc11g012160.2 Solanum lycopersicum HOM05D005487 ORTHO05D007280 3.3e-189 665.2 431 72.4
Sopen11g006950 Solanum pennellii HOM05D005487 ORTHO05D007280 5.7e-189 664.5 431 72.9
Gorai.010G250300 Gossypium raimondii HOM05D005487 ORTHO05D007280 1.6e-188 662.9 425 72.2
Atru.chr1.2460 Acer truncatum HOM05D005487 ORTHO05D007280 2.8e-188 662.1 428 73.8
FvH4_3g01030 Fragaria vesca HOM05D005487 ORTHO05D007280 2.8e-188 662.1 427 73.3
Cc09_g00910 Coffea canephora HOM05D005487 ORTHO05D007280 3.7e-188 661.8 431 72.6
RcHm_v2.0_Chr5g0001571 Rosa chinensis HOM05D005487 ORTHO05D007280 3.7e-188 661.8 427 72.8
Cpa.g.sc75.119 Carica papaya HOM05D005487 ORTHO05D007280 8.2e-188 660.6 427 72.8
Gohir.A06G205600 Gossypium hirsutum HOM05D005487 ORTHO05D007280 8.2e-188 660.6 425 72.0
Potri.006G009200 Populus trichocarpa HOM05D005487 ORTHO05D007280 1.4e-187 659.8 426 71.8
Gohir.D06G215900 Gossypium hirsutum HOM05D005487 ORTHO05D007280 3.1e-187 658.7 425 71.8
ClCG01G021500 Citrullus lanatus HOM05D005487 ORTHO05D007280 4.1e-187 658.3 428 72.4
Ciclev10015367m.g Citrus clementina HOM05D005487 ORTHO05D007280 5.3e-187 657.9 427 72.1
FAN21G2054 Fragaria x ananassa HOM05D005487 ORTHO05D007280 5.3e-187 657.9 427 72.8
Prupe.4G011100 Prunus persica HOM05D005487 ORTHO05D007280 6.9e-187 657.5 428 72.4
GSVIVG01003351001 Vitis vinifera HOM05D005487 ORTHO05D007280 1.5e-186 656.4 427 71.7
PSO764G0115 Papaver somniferum HOM05D005487 ORTHO05D007280 3.4e-186 655.2 429 71.6
Gorai.009G182900 Gossypium raimondii HOM05D005487 ORTHO05D007280 5.9e-186 654.4 427 72.4
Sed0025030 Sechium edule HOM05D005487 ORTHO05D007280 7.7e-186 654.1 429 71.6
EL10Ac8g20177 Beta vulgaris HOM05D005487 ORTHO05D007280 1.3e-185 653.3 426 72.3
CAN.G1186.29 Capsicum annuum HOM05D005487 ORTHO05D007280 1.3e-185 653.3 432 72.2
CANSAT56G2574 Cannabis sativa HOM05D005487 ORTHO05D007280 5.0e-185 651.4 427 69.8
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 5.0e-185 651.4 424 71.0
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 5.0e-185 651.4 421 72.0
CsaV3_6G048520 Cucumis sativus L. HOM05D005487 ORTHO05D007280 6.5e-185 651.0 429 71.1
Gohir.A05G174500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 6.5e-185 651.0 427 71.9
MD10G1331100 Malus domestica HOM05D005487 ORTHO05D007280 1.1e-184 650.2 428 71.3
MSTRG.16025 Avicennia marina HOM05D005487 ORTHO05D007280 1.4e-184 649.8 428 71.5
Dinv07399 Davidia involucrata HOM05D005487 ORTHO05D007280 3.2e-184 648.7 410 75.1
Gohir.D05G177500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 5.5e-184 647.9 427 71.7
arahy.Tifrunner.gnm1.ann1.61KG5W Arachis hypogaea HOM05D005487 ORTHO05D007280 7.2e-184 647.5 429 69.5
PSO210G3736 Papaver somniferum HOM05D005487 ORTHO05D007280 7.2e-184 647.5 425 71.1
MELO3C007433.2 Cucumis melo HOM05D005487 ORTHO05D007280 9.4e-184 647.1 428 71.0
SalBow8G2024 Salvia bowleyana HOM05D005487 ORTHO05D007280 1.6e-183 646.4 428 70.8
CARHR012410 Cardamine hirsuta HOM05D005487 ORTHO05D007280 2.1e-183 646.0 427 70.5
ATR1101G021 Amborella trichopoda HOM05D005487 ORTHO05D007280 2.7e-183 645.6 428 70.6
arahy.Tifrunner.gnm1.ann1.8PBE23 Arachis hypogaea HOM05D005487 ORTHO05D007280 4.6e-183 644.8 429 69.2
Thhalv10007724m.g Eutrema salsugineum HOM05D005487 ORTHO05D007280 3.0e-182 642.1 427 70.3
AUR62021869 Chenopodium quinoa HOM05D005487 ORTHO05D007280 3.9e-182 641.7 427 71.9
Peaxi162Scf00558g00518 Petunia axillaris HOM05D005487 ORTHO05D007280 3.9e-182 641.7 468 66.5
AL1G23300 Arabidopsis lyrata HOM05D005487 ORTHO05D007280 8.8e-182 640.6 427 69.8
BcaB02g06431 Brassica carinata HOM05D005487 ORTHO05D007280 1.1e-181 640.2 428 69.6
PGSC0003DMG400013273 Solanum tuberosum HOM05D005487 ORTHO05D007280 2.0e-181 639.4 504 62.5
AT1G12050 Arabidopsis thaliana HOM05D005487 ORTHO05D007280 2.5e-181 639.0 427 70.0
BolC5t29858H Brassica oleracea HOM05D005487 ORTHO05D007280 2.5e-181 639.0 427 69.6
THA.LOC104809472 Tarenaya hassleriana HOM05D005487 ORTHO05D007280 2.5e-181 639.0 425 71.1
HanXRQChr10g0284101 Helianthus annuus HOM05D005487 ORTHO05D007280 3.3e-181 638.6 430 70.2
Psat1g176520 Pisum sativum HOM05D005487 ORTHO05D007280 3.3e-181 638.6 428 67.8
Aqoxy1G04106 Aquilegia oxysepala HOM05D005487 ORTHO05D007280 4.3e-181 638.3 430 69.3
Eucgr.L00543 Eucalyptus grandis HOM05D005487 ORTHO05D007280 5.7e-181 637.9 461 66.8
Sp1g10720 Schrenkiella parvula HOM05D005487 ORTHO05D007280 7.4e-181 637.5 427 69.6
Carub.0001s1173 Capsella rubella HOM05D005487 ORTHO05D007280 9.7e-181 637.1 427 69.3
Lalb_Chr15g0087971 Lupinus albus HOM05D005487 ORTHO05D007280 9.7e-181 637.1 425 68.7
Ca_00719_v3 Cicer arietinum L. HOM05D005487 ORTHO05D007280 1.8e-179 632.9 426 67.8
TPR.G13057 Trifolium pratense HOM05D005487 ORTHO05D007280 4.1e-179 631.7 428 67.1
Lj6g0015557 Lotus japonicus HOM05D005487 ORTHO05D007280 6.9e-179 630.9 426 68.5
Phvul.006G143500 Phaseolus vulgaris HOM05D005487 ORTHO05D007280 6.9e-179 630.9 428 67.5
Glyma.09G010000 Glycine max HOM05D005487 ORTHO05D007280 1.2e-178 630.2 428 67.3
HPP92_027542 Vanilla planifolia HOM05D005487 ORTHO05D007280 1.2e-178 630.2 434 67.5
HPP92_003014 Vanilla planifolia HOM05D005487 ORTHO05D007280 2.6e-178 629.0 433 67.4
Medtr2g025640 Medicago truncatula HOM05D005487 ORTHO05D007280 4.5e-178 628.2 424 66.7
VMungo0540G1792 Vigna mungo HOM05D005487 ORTHO05D007280 1.0e-177 627.1 428 67.5
CAN.G1263.14 Capsicum annuum HOM05D005487 ORTHO05D007280 1.7e-177 626.3 427 68.9
Lsat_1_v5_gn_8_64401 Lactuca sativa HOM05D005487 ORTHO05D007280 1.7e-177 626.3 434 69.6
Glyma.15G114300 Glycine max HOM05D005487 ORTHO05D007280 2.2e-177 625.9 428 66.6
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 6.5e-177 624.4 406 73.2
Peaxi162Scf00442g00414 Petunia axillaris HOM05D005487 ORTHO05D007280 7.2e-176 620.9 459 64.7
vmacro03645 Vaccinium macrocarpon HOM05D005487 ORTHO05D007280 1.6e-175 619.8 412 71.4
Haze_06922 Corylus avellana HOM05D005487 ORTHO05D007280 4.7e-175 618.2 442 68.8
Sopen04g006840 Solanum pennellii HOM05D005487 ORTHO05D007280 4.7e-175 618.2 426 68.1
Os02g0196800 Oryza sativa ssp. japonica HOM05D005487 ORTHO05D007280 3.0e-174 615.5 429 65.5
Aa31LG1G2680 Aethionema arabicum HOM05D005487 ORTHO05D007280 3.9e-174 615.1 425 67.3
DCAR_027826 Daucus carota HOM05D005487 ORTHO05D007280 5.1e-174 614.8 426 68.8
PGSC0003DMG400023608 Solanum tuberosum HOM05D005487 ORTHO05D007280 8.8e-174 614.0 426 67.6
BcaC05g25225 Brassica carinata HOM05D005487 ORTHO05D007280 7.4e-173 610.9 413 69.0
Haze_06917 Corylus avellana HOM05D005487 ORTHO05D007280 7.4e-173 610.9 468 65.0
C05p11110 Brassica napus HOM05D005487 ORTHO05D007280 1.7e-172 609.8 413 69.0
Hund23409 Selenicereus undatus HOM05D005487 ORTHO05D007280 4.8e-172 608.2 402 71.1
BraA06t24129Z Brassica rapa HOM05D005487 ORTHO05D007280 6.3e-172 607.8 410 68.8
Zm00001eb236160 Zea mays HOM05D005487 ORTHO05D007280 8.2e-172 607.4 430 64.9
SGA_v2.0_scaffold7G03757 Striga asiatica HOM05D005487 ORTHO05D007280 1.8e-171 606.3 438 67.4
A06p09440 Brassica napus HOM05D005487 ORTHO05D007280 3.1e-171 605.5 412 68.9
Solyc04g014730.4 Solanum lycopersicum HOM05D005487 ORTHO05D007280 2.6e-170 602.4 420 66.9
unitig_0.g999 Utricularia gibba HOM05D005487 ORTHO05D007280 1.9e-168 596.3 413 68.3
Sabra06G0007000 Salix brachista HOM05D005487 ORTHO05D007280 7.2e-168 594.3 425 67.1
Pp3c4_7990 Physcomitrium patens HOM05D005487 ORTHO05D007280 4.7e-159 565.1 427 63.0
SMO137G0224 Selaginella moellendorffii HOM05D005487 ORTHO05D007280 7.0e-155 551.2 425 63.1
Mapoly0022s0035 Marchantia polymorpha HOM05D005487 ORTHO05D007280 3.5e-154 548.9 423 59.6
AUR62012785 Chenopodium quinoa HOM05D005487 ORTHO05D007280 5.9e-154 548.1 409 66.0
Duzib235G0086 Durio zibethinus HOM05D005487 ORTHO05D007280 8.5e-153 544.3 349 73.6
Sc17g0007720 Simmondsia chinensis HOM05D005487 ORTHO05D007280 8.0e-151 537.7 302 80.8
AagrBONN_evm.TU.Sc2ySwM_344.3343 Anthoceros agrestis HOM05D005487 ORTHO05D007280 1.5e-149 533.5 429 59.9
Zm00001eb205930 Zea mays HOM05D005487 ORTHO05D007280 2.3e-145 519.6 367 64.6
Ah.09g234260 Amaranthus hybridus HOM05D005487 ORTHO05D007280 2.5e-144 516.2 429 61.3
Migut.M01391 Erythranthe guttata HOM05D005487 ORTHO05D007280 4.0e-142 508.8 431 59.2
CSS0007230 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 6.1e-135 485.0 452 56.2
Pp3c13_16620 Physcomitrium patens HOM05D005487 ORTHO05D007280 1.7e-132 476.9 366 60.9
Haze_26411 Corylus avellana HOM05D005487 ORTHO05D007280 2.2e-132 476.5 428 53.0
CBR_g46703 Chara braunii HOM05D005487 ORTHO05D007280 9.2e-115 417.9 468 46.4
Cre17.g732802 Chlamydomonas reinhardtii HOM05D005487 ORTHO05D007280 6.0e-114 415.2 479 47.4
ECA236G3803 Erigeron canadensis HOM05D005487 ORTHO05D007280 4.7e-111 405.6 277 69.3
RcHm_v2.0_Chr3g0484131 Rosa chinensis HOM05D005487 ORTHO05D007280 6.0e-106 388.7 473 48.2
RcHm_v2.0_Chr3g0477951 Rosa chinensis HOM05D005487 ORTHO05D007280 4.3e-104 382.5 479 47.2
PRCOL_00001448 Prasinoderma coloniale HOM05D005487 ORTHO05D007280 4.2e-99 365.9 432 45.8
Gorai.001G209700 Gossypium raimondii HOM05D005487 ORTHO05D007280 4.4e-48 196.4 116 75.0
Gohir.D07G188750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 6.8e-33 146.0 116 59.5
RcHm_v2.0_Chr5g0003621 Rosa chinensis HOM05D005487 ORTHO05D007280 2.9e-28 130.6 105 62.9
C06p15210 Brassica napus HOM05D005487 ORTHO05D042797 3.5e-21 107.1 92 56.5
BolC6t36696H Brassica oleracea HOM05D005487 ORTHO05D042797 3.5e-21 107.1 92 56.5
Gohir.D13G151750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.2e-18 98.6 55 80.0
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 2.8e-18 97.4 136 43.4
SEGI_36702 Sequoiadendron giganteum HOM05D005487 ORTHO05D007280 3.6e-18 97.1 76 60.5
BcaC08g44100 Brassica carinata HOM05D005487 ORTHO05D027150 1.4e-14 85.1 63 60.3
BolC9t55424H Brassica oleracea HOM05D005487 ORTHO05D027150 2.4e-14 84.3 67 58.2
BcaC04g21976 Brassica carinata HOM05D005487 ORTHO05D027150 4.1e-14 83.6 67 58.2
C09p25260 Brassica napus HOM05D005487 ORTHO05D027150 1.7e-12 78.2 65 55.4
Pp3c6_20080 Physcomitrium patens HOM05D004309 ORTHO05D005588 7.5e-08 62.8 204 26.5
MCO13G238 Micromonas commoda HOM05D004309 ORTHO05D005588 1.7e-07 61.6 194 29.4
SMO353G0001 Selaginella moellendorffii HOM05D004309 ORTHO05D005588 2.4e-06 57.8 186 27.4
TAR381G0287 Trochodendron aralioides HOM05D005487 ORTHO05D415274 5.4e-06 56.6 25 92.0


User provided reference genes

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