Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0886 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 7.2e-134 480.7 266 100.0
CDE04G1023 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 4.7e-117 424.9 266 84.6
TAR623G0045 Trochodendron aralioides HOM05D005413 ORTHO05D006536 6.7e-47 191.8 286 44.4
MBI15_g31416_MAGBIO Magnolia biondii HOM05D005413 ORTHO05D006536 8.7e-47 191.4 278 45.7
Nn2g14375 Nelumbo nucifera HOM05D005413 ORTHO05D006536 2.4e-44 183.3 284 43.7
GSVIVG01037530001 Vitis vinifera HOM05D005413 ORTHO05D006536 1.1e-38 164.5 279 39.4
CSS0023574 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 4.1e-36 156.0 275 40.4
Dinv18856 Davidia involucrata HOM05D005413 ORTHO05D006536 4.5e-35 152.5 270 41.1
ATR1120G017 Amborella trichopoda HOM05D005413 ORTHO05D006536 1.0e-34 151.4 283 38.2
CiPaw.14G092700 Carya illinoinensis HOM05D005413 ORTHO05D006536 1.3e-34 151.0 287 39.4
Ciclev10028962m.g Citrus clementina HOM05D005413 ORTHO05D006536 2.2e-34 150.2 284 37.7
Dinv04422 Davidia involucrata HOM05D005413 ORTHO05D006536 2.2e-34 150.2 285 39.6
TAR633G2414 Trochodendron aralioides HOM05D005413 ORTHO05D006536 1.6e-32 144.1 224 42.4
Aqoxy1G00612 Aquilegia oxysepala HOM05D005413 ORTHO05D006536 6.1e-32 142.1 293 36.2
COL.COLO4_00160 Corchorus olitorius HOM05D005413 ORTHO05D006536 3.0e-31 139.8 227 41.9
Thecc.09G267600 Theobroma cacao HOM05D005413 ORTHO05D006536 3.0e-31 139.8 290 36.9
Actinidia37056 Actinidia chinensis HOM05D005413 ORTHO05D006536 6.7e-31 138.7 284 37.0
Duzib170G0305 Durio zibethinus HOM05D005413 ORTHO05D006536 8.8e-31 138.3 290 35.5
ECA238G0598 Erigeron canadensis HOM05D005413 ORTHO05D006536 8.8e-31 138.3 277 38.6
QL01p019216 Quercus lobata HOM05D005413 ORTHO05D006536 1.9e-30 137.1 219 42.9
Hund06812 Selenicereus undatus HOM05D005413 ORTHO05D006536 5.7e-30 135.6 271 40.2
TWI79G1192 Tripterygium wilfordii HOM05D005413 ORTHO05D006536 5.7e-30 135.6 277 37.2
MSTRG.12398 Avicennia marina HOM05D005413 ORTHO05D006536 7.4e-30 135.2 272 38.2
Duzib168G1403 Durio zibethinus HOM05D005413 ORTHO05D006536 7.4e-30 135.2 290 36.6
Hma1.2p1_0101F.1_g049660 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 9.7e-30 134.8 280 35.7
SEGI_03865 Sequoiadendron giganteum HOM05D005413 ORTHO05D006536 1.7e-29 134.0 303 36.6
PSO339G2181 Papaver somniferum HOM05D005413 ORTHO05D006536 2.2e-29 133.7 287 40.1
CSS0050484 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 2.8e-29 133.3 281 35.6
Prupe.6G147200 Prunus persica HOM05D005413 ORTHO05D006536 6.3e-29 132.1 277 36.5
Medtr4g050330 Medicago truncatula HOM05D005413 ORTHO05D006536 1.8e-28 130.6 283 35.0
Actinidia11676 Actinidia chinensis HOM05D005413 ORTHO05D006536 3.1e-28 129.8 276 36.2
Potri.008G001700 Populus trichocarpa HOM05D005413 ORTHO05D006536 3.1e-28 129.8 280 38.2
Potri.008G015500 Populus trichocarpa HOM05D005413 ORTHO05D006536 3.1e-28 129.8 280 38.2
PSO384G0849 Papaver somniferum HOM05D005413 ORTHO05D006536 6.9e-28 128.6 279 43.0
Atru.chr3.3078 Acer truncatum HOM05D005413 ORTHO05D006536 9.1e-28 128.3 284 34.9
Atru.chr3.3087 Acer truncatum HOM05D005413 ORTHO05D006536 9.1e-28 128.3 284 34.9
FvH4_3g26150 Fragaria vesca HOM05D005413 ORTHO05D006536 9.1e-28 128.3 285 34.7
Nitab4.5_0000158g0110 Nicotiana tabacum HOM05D005413 ORTHO05D006536 1.2e-27 127.9 234 44.0
TPR.G4599 Trifolium pratense HOM05D005413 ORTHO05D006536 1.5e-27 127.5 279 34.4
MELO3C014525.2 Cucumis melo HOM05D005413 ORTHO05D006536 2.0e-27 127.1 280 35.0
CsaV3_6G038630 Cucumis sativus L. HOM05D005413 ORTHO05D006536 2.0e-27 127.1 280 35.0
Lj2A950G18 Lonicera japonica HOM05D005413 ORTHO05D006536 2.6e-27 126.7 226 40.3
Eucgr.J00585 Eucalyptus grandis HOM05D005413 ORTHO05D006536 3.4e-27 126.3 282 35.1
FAN11G2501 Fragaria x ananassa HOM05D005413 ORTHO05D006536 3.4e-27 126.3 288 34.4
RcHm_v2.0_Chr5g0049091 Rosa chinensis HOM05D005413 ORTHO05D006536 3.4e-27 126.3 291 34.0
Gohir.A05G077100 Gossypium hirsutum HOM05D005413 ORTHO05D006536 4.5e-27 125.9 276 37.7
Gohir.D05G079900 Gossypium hirsutum HOM05D005413 ORTHO05D006536 4.5e-27 125.9 290 36.2
PGSC0003DMG400002998 Solanum tuberosum HOM05D005413 ORTHO05D006536 5.9e-27 125.6 215 40.5
Peaxi162Scf00429g00512 Petunia axillaris HOM05D005413 ORTHO05D006536 1.0e-26 124.8 220 39.1
Oeu031446.2 Olea europaea HOM05D005413 ORTHO05D006536 1.3e-26 124.4 258 36.8
PGR119G0748 Punica granatum HOM05D005413 ORTHO05D006536 1.3e-26 124.4 280 35.7
Sabra10G0191100 Salix brachista HOM05D005413 ORTHO05D006536 1.3e-26 124.4 227 40.1
Gorai.009G081500 Gossypium raimondii HOM05D005413 ORTHO05D006536 1.7e-26 124.0 289 36.0
MD11G1174800 Malus domestica HOM05D005413 ORTHO05D006536 1.7e-26 124.0 290 33.8
Manes.11G103700 Manihot esculenta HOM05D005413 ORTHO05D006536 2.9e-26 123.2 283 36.7
Potri.010G244600 Populus trichocarpa HOM05D005413 ORTHO05D006536 6.5e-26 122.1 252 37.7
Sopen11g029620 Solanum pennellii HOM05D005413 ORTHO05D006536 6.5e-26 122.1 215 40.0
AUR62024117 Chenopodium quinoa HOM05D005413 ORTHO05D006536 1.4e-25 120.9 286 36.4
ClCG02G022490 Citrullus lanatus HOM05D005413 ORTHO05D006536 1.4e-25 120.9 285 35.4
Lalb_Chr19g0136161 Lupinus albus HOM05D005413 ORTHO05D006536 1.9e-25 120.6 279 35.5
Nitab4.5_0008364g0010 Nicotiana tabacum HOM05D005413 ORTHO05D006536 2.5e-25 120.2 215 43.7
Solyc11g071950.3 Solanum lycopersicum HOM05D005413 ORTHO05D006536 2.5e-25 120.2 215 39.5
vmacro07276 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 3.2e-25 119.8 163 46.6
DCAR_018207 Daucus carota HOM05D005413 ORTHO05D006536 4.2e-25 119.4 279 35.5
Ca_19483_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 5.5e-25 119.0 285 33.0
Hma1.2p1_0098F.1_g048260 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 5.5e-25 119.0 279 34.4
Cc01_g07840 Coffea canephora HOM05D005413 ORTHO05D006536 7.2e-25 118.6 233 36.9
FAN25G1874 Fragaria x ananassa HOM05D005413 ORTHO05D006536 9.4e-25 118.2 286 33.2
vmacro14313 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 9.4e-25 118.2 331 32.3
Psat7g200680 Pisum sativum HOM05D005413 ORTHO05D006536 1.6e-24 117.5 282 35.5
HPP92_015644 Vanilla planifolia HOM05D005413 ORTHO05D006536 1.6e-24 117.5 278 36.0
VMungo1127G2102 Vigna mungo HOM05D005413 ORTHO05D006536 2.1e-24 117.1 270 34.1
Migut.D02382 Erythranthe guttata HOM05D005413 ORTHO05D006536 6.1e-24 115.5 166 45.2
Cfa010502 Carpinus fangiana HOM05D005413 ORTHO05D006536 7.9e-24 115.2 278 34.2
Lj3g0006130 Lotus japonicus HOM05D005413 ORTHO05D006536 7.9e-24 115.2 279 33.7
unitig_899.g15382 Utricularia gibba HOM05D005413 ORTHO05D006536 1.4e-23 114.4 215 37.7
Phvul.011G100200 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 1.8e-23 114.0 274 33.9
Haze_03431 Corylus avellana HOM05D005413 ORTHO05D006536 5.1e-23 112.5 205 39.0
SGA_v2.0_scaffold22G09835 Striga asiatica HOM05D005413 ORTHO05D006536 5.1e-23 112.5 212 38.2
Rhsim03G0094100 Rhododendron simsii HOM05D005413 ORTHO05D006536 6.7e-23 112.1 125 52.8
arahy.Tifrunner.gnm1.ann1.K4CWT5 Arachis hypogaea HOM05D005413 ORTHO05D006536 8.8e-23 111.7 272 36.4
Sabra08G0009400 Salix brachista HOM05D005413 ORTHO05D006536 8.8e-23 111.7 286 35.0
arahy.Tifrunner.gnm1.ann1.C0JSMI Arachis hypogaea HOM05D005413 ORTHO05D006536 1.1e-22 111.3 272 36.4
FAN16G0400 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.1e-22 111.3 222 36.5
FAN16G2334 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.1e-22 111.3 222 36.5
Os03g0274700 Oryza sativa ssp. japonica HOM05D005413 ORTHO05D006536 1.5e-22 110.9 275 32.7
Sc09g0004800 Simmondsia chinensis HOM05D005413 ORTHO05D006536 4.4e-22 109.4 209 38.8
QL04p048808 Quercus lobata HOM05D005413 ORTHO05D006536 9.7e-22 108.2 141 47.5
Thhalv10014324m.g Eutrema salsugineum HOM05D005413 ORTHO05D006536 1.3e-21 107.8 279 34.8
DCAR_012252 Daucus carota HOM05D005413 ORTHO05D006536 1.7e-21 107.5 230 36.1
HanXRQChr05g0137071 Helianthus annuus HOM05D005413 ORTHO05D006536 2.2e-21 107.1 283 33.2
Zm00001eb012330 Zea mays HOM05D005413 ORTHO05D006536 2.8e-21 106.7 290 31.7
Glyma.12G095900 Glycine max HOM05D005413 ORTHO05D006536 3.7e-21 106.3 276 32.6
EL10Ac6g13493 Beta vulgaris HOM05D005413 ORTHO05D006536 4.8e-21 105.9 280 34.3
Rhsim01G0199900 Rhododendron simsii HOM05D005413 ORTHO05D006536 1.1e-20 104.8 385 28.8
AUR62005613 Chenopodium quinoa HOM05D005413 ORTHO05D006536 1.4e-20 104.4 229 39.3
SalBow6G6902 Salvia bowleyana HOM05D005413 ORTHO05D006536 2.4e-20 103.6 212 39.2
Oeu033267.1 Olea europaea HOM05D005413 ORTHO05D006536 4.1e-20 102.8 219 38.4
BcaC01g06609 Brassica carinata HOM05D005413 ORTHO05D006536 1.2e-19 101.3 271 33.2
BolC3t13687H Brassica oleracea HOM05D005413 ORTHO05D006536 1.2e-19 101.3 271 33.2
Dinv03807 Davidia involucrata HOM05D005413 ORTHO05D006536 1.5e-19 100.9 199 39.2
MD03G1159500 Malus domestica HOM05D005413 ORTHO05D006536 1.5e-19 100.9 282 31.6
BraA03t10367Z Brassica rapa HOM05D005413 ORTHO05D006536 4.5e-19 99.4 271 32.8
Lj5g0017620 Lotus japonicus HOM05D005413 ORTHO05D006536 7.7e-19 98.6 248 34.7
Rhsim01G0199600 Rhododendron simsii HOM05D005413 ORTHO05D006536 1.3e-18 97.8 400 28.0
C03p12140 Brassica napus HOM05D005413 ORTHO05D006536 1.7e-18 97.4 271 32.5
Ah.03g136210 Amaranthus hybridus HOM05D005413 ORTHO05D006536 2.2e-18 97.1 271 34.7
Glyma.11G171773 Glycine max HOM05D005413 ORTHO05D006536 2.9e-18 96.7 287 30.7
Sed0018758 Sechium edule HOM05D005413 ORTHO05D006536 3.8e-18 96.3 195 37.9
A03p10550 Brassica napus HOM05D005413 ORTHO05D006536 5.0e-18 95.9 271 32.5
Lalb_Chr21g0312751 Lupinus albus HOM05D005413 ORTHO05D006536 5.0e-18 95.9 141 44.0
arahy.Tifrunner.gnm1.ann1.BD57S3 Arachis hypogaea HOM05D005413 ORTHO05D006536 8.5e-18 95.1 196 38.3
Thecc.10G119400 Theobroma cacao HOM05D005413 ORTHO05D006536 8.5e-18 95.1 214 34.6
arahy.Tifrunner.gnm1.ann1.0IPW5R Arachis hypogaea HOM05D005413 ORTHO05D006536 1.4e-17 94.4 92 58.7
Lalb_Chr03g0028501 Lupinus albus HOM05D005413 ORTHO05D006536 1.9e-17 94.0 277 32.9
FAN21G0466 Fragaria x ananassa HOM05D005413 ORTHO05D006536 5.5e-17 92.4 288 32.3
Sp6g23150 Schrenkiella parvula HOM05D005413 ORTHO05D006536 5.5e-17 92.4 283 31.8
CARHR191490 Cardamine hirsuta HOM05D005413 ORTHO05D006536 8.0e-16 88.6 279 30.5
TPR.G10267 Trifolium pratense HOM05D005413 ORTHO05D006536 1.1e-14 84.7 136 39.0
Phvul.007G136700 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 1.5e-14 84.3 90 53.3
Lj2C36T10 Lonicera japonica HOM05D005413 ORTHO05D006536 5.7e-14 82.4 287 29.3
Haze_03425 Corylus avellana HOM05D005413 ORTHO05D006536 9.7e-14 81.6 122 40.2
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 9.7e-14 81.6 91 51.6
Dinv33562 Davidia involucrata HOM05D005413 ORTHO05D006536 1.3e-13 81.3 131 36.6
Medtr1g090350 Medicago truncatula HOM05D005413 ORTHO05D006536 2.8e-13 80.1 130 40.0
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 3.7e-13 79.7 142 37.3
Ca_10423_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 1.1e-12 78.2 201 32.8
Aa31LG1G13390 Aethionema arabicum HOM05D005413 ORTHO05D006536 7.0e-12 75.5 268 30.6
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 2.0e-11 73.9 193 30.6
Oeu029208.1 Olea europaea HOM05D005413 ORTHO05D006536 4.5e-11 72.8 69 52.2
BcaB01g04747 Brassica carinata HOM05D005413 ORTHO05D006536 1.3e-10 71.2 271 29.2
Lsat_1_v5_gn_2_106300 Lactuca sativa HOM05D005413 ORTHO05D006536 1.3e-10 71.2 225 30.7
THA.LOC104815083 Tarenaya hassleriana HOM05D005413 ORTHO05D006536 5.5e-09 65.9 279 27.6
THA.LOC104810942 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 3.6e-08 63.2 139 33.1
AT5G22040 Arabidopsis thaliana HOM05D005413 ORTHO05D006536 4.7e-08 62.8 277 27.4
Cpa.g.sc33.125 Carica papaya HOM05D005413 ORTHO05D006536 8.0e-08 62.0 67 49.3
PGR044G1324 Punica granatum HOM05D003044 ORTHO05D001869 1.0e-07 61.6 69 47.8
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 5.7e-06 55.8 106 37.7
AL6G33000 Arabidopsis lyrata HOM05D005413 ORTHO05D006536 7.5e-06 55.5 277 26.0


User provided reference genes

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