Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.5e-122 442.2 236 100.0
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.2e-76 290.4 171 89.5
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.4e-24 117.5 148 46.6
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.2e-23 114.4 170 47.1
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 3.5e-23 112.8 146 46.6
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 3.9e-22 109.4 146 44.5
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 8.6e-22 108.2 154 44.8
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 1.9e-21 107.1 162 42.6
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 2.5e-21 106.7 172 43.6
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 2.5e-21 106.7 152 46.7
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 3.3e-21 106.3 152 46.7
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 5.6e-21 105.5 149 45.0
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 7.3e-21 105.1 152 42.1
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 1.2e-20 104.4 171 43.3
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.6e-20 104.0 158 46.8
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.6e-20 104.0 158 46.8
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 2.8e-20 103.2 151 46.4
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 3.6e-20 102.8 151 40.4
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 4.7e-20 102.4 168 42.9
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.7e-20 102.4 168 42.9
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 6.2e-20 102.1 153 45.8
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.1e-20 101.7 172 43.6
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 1.1e-19 101.3 137 48.2
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.3e-19 100.1 171 42.7
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 2.3e-19 100.1 167 41.3
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.1e-19 99.8 169 42.6
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 4.0e-19 99.4 156 43.6
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 4.0e-19 99.4 149 40.9
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 5.2e-19 99.0 150 42.7
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 5.2e-19 99.0 156 40.4
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.2e-19 99.0 153 42.5
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 5.2e-19 99.0 162 40.7
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 5.2e-19 99.0 166 44.6
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 6.8e-19 98.6 161 42.2
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 6.8e-19 98.6 158 39.2
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 6.8e-19 98.6 148 46.6
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.9e-19 98.2 153 42.5
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.9e-19 98.2 169 42.0
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 2.6e-18 96.7 159 43.4
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 4.4e-18 95.9 148 41.9
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 5.8e-18 95.5 171 39.8
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.8e-18 95.5 153 41.2
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 9.8e-18 94.7 181 39.8
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 1.7e-17 94.0 156 41.0
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.2e-17 93.6 151 40.4
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.2e-17 93.6 164 40.9
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 2.2e-17 93.6 158 42.4
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 2.9e-17 93.2 145 42.1
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 2.9e-17 93.2 148 43.2
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 2.9e-17 93.2 160 42.5
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 2.9e-17 93.2 164 40.9
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 3.7e-17 92.8 146 40.4
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.7e-17 92.8 164 40.2
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 4.9e-17 92.4 153 43.1
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 4.9e-17 92.4 141 46.8
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 8.3e-17 91.7 169 40.2
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 1.4e-16 90.9 131 44.3
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 1.9e-16 90.5 163 39.9
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 3.2e-16 89.7 166 40.4
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 3.2e-16 89.7 118 44.9
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 3.2e-16 89.7 182 38.5
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 4.1e-16 89.4 156 39.7
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 5.4e-16 89.0 157 38.9
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 5.4e-16 89.0 158 39.2
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 5.4e-16 89.0 180 36.1
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 9.2e-16 88.2 145 38.6
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 9.2e-16 88.2 177 37.3
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 9.2e-16 88.2 150 38.7
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 1.2e-15 87.8 163 39.3
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.7e-15 86.7 148 39.2
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.5e-15 86.3 177 37.3
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 3.5e-15 86.3 146 41.8
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 4.6e-15 85.9 151 41.7
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 4.6e-15 85.9 165 40.0
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 6.0e-15 85.5 134 44.8
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 7.8e-15 85.1 177 36.7
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 1.0e-14 84.7 150 39.3
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 1.0e-14 84.7 148 41.2
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 1.3e-14 84.3 144 44.4
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 1.3e-14 84.3 151 37.1
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 1.3e-14 84.3 147 41.5
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 1.7e-14 84.0 177 35.0
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 2.3e-14 83.6 155 38.7
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.3e-14 83.6 150 36.0
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 3.0e-14 83.2 156 40.4
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 3.0e-14 83.2 172 34.9
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 6.6e-14 82.0 173 35.8
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 8.6e-14 81.6 151 42.4
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 2.5e-13 80.1 147 38.8
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 2.5e-13 80.1 154 39.6
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.3e-13 79.3 108 47.2
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 5.6e-13 79.0 143 39.9
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 9.5e-13 78.2 160 40.0
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 2.1e-12 77.0 145 36.6
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 2.1e-12 77.0 153 37.3
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 2.1e-12 77.0 119 45.4
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 3.6e-12 76.3 149 37.6
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 8.1e-12 75.1 148 37.8
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 1.1e-11 74.7 177 34.5
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 1.1e-11 74.7 168 32.1
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 1.4e-11 74.3 169 35.5
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 1.8e-11 73.9 118 40.7
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 2.3e-11 73.6 113 43.4
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 3.1e-11 73.2 143 39.9
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 5.2e-11 72.4 149 36.2
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 5.2e-11 72.4 149 36.2
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 1.2e-10 71.2 145 35.9
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 1.5e-10 70.9 151 37.7
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 1.5e-10 70.9 157 37.6
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 1.5e-10 70.9 141 40.4
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 2.6e-10 70.1 149 36.9
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 2.6e-10 70.1 149 36.9
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 4.4e-10 69.3 110 42.7
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 5.8e-10 68.9 103 39.8
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 9.9e-10 68.2 149 36.9
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 1.7e-09 67.4 154 36.4
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 3.7e-09 66.2 119 36.1
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 1.1e-08 64.7 168 35.1
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 1.4e-08 64.3 102 42.2
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 1.4e-08 64.3 171 30.4
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 2.4e-08 63.5 161 32.3
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 3.2e-08 63.2 93 41.9
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 3.2e-08 63.2 148 33.1
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 3.2e-08 63.2 148 33.1
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 3.2e-08 63.2 152 34.2
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 3.2e-08 63.2 88 43.2
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 1.6e-07 60.8 148 31.8
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 1.6e-07 60.8 148 31.8
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 1.6e-07 60.8 116 39.7
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 1.6e-07 60.8 146 32.2
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 2.7e-07 60.1 147 32.7
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 2.7e-07 60.1 142 35.9
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 2.7e-07 60.1 142 35.9
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 4.6e-07 59.3 154 32.5
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 6.0e-07 58.9 59 54.2
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 6.0e-07 58.9 136 35.3
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 6.0e-07 58.9 147 34.7
QL10p006175 Quercus lobata HOM05D000022 ORTHO05D006148 7.8e-07 58.5 108 40.7
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 3.0e-06 56.6 88 38.6
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.6e-06 55.5 100 42.0
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 8.6e-06 55.1 103 36.9


User provided reference genes

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