Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 7.6e-101 370.5 193 100.0
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 7.0e-54 214.5 191 61.3
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 4.7e-50 201.8 193 58.5
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 1.1e-46 190.7 194 55.7
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 1.1e-46 190.7 194 56.2
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 1.4e-46 190.3 193 56.0
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 3.1e-46 189.1 197 56.9
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 3.8e-44 182.2 156 60.3
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 5.0e-44 181.8 180 57.2
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 5.0e-44 181.8 186 54.3
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 1.5e-43 180.3 198 54.0
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 3.2e-43 179.1 196 52.6
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 5.5e-43 178.3 131 67.2
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 9.4e-43 177.6 196 52.0
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 1.6e-42 176.8 195 52.8
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 3.6e-42 175.6 206 52.9
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 1.4e-41 173.7 187 52.9
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 8.8e-41 171.0 197 50.8
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.5e-40 170.2 196 51.5
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 2.0e-40 169.9 187 53.5
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 2.0e-40 169.9 196 52.6
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 2.0e-40 169.9 136 64.7
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 2.6e-40 169.5 196 54.6
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 9.8e-40 167.5 195 50.3
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 1.8e-38 163.3 127 68.5
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 2.4e-38 162.9 161 60.9
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 4.1e-38 162.2 194 49.5
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 2.7e-37 159.5 144 59.7
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 5.9e-37 158.3 187 51.3
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 1.3e-36 157.1 196 52.6
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 8.6e-36 154.5 196 51.0
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 3.3e-35 152.5 188 50.0
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 1.6e-34 150.2 123 69.9
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 5.2e-33 145.2 195 49.2
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 6.8e-33 144.8 194 47.9
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 1.5e-32 143.7 173 50.9
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 2.0e-32 143.3 158 54.4
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 2.6e-32 142.9 194 47.9
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 3.4e-32 142.5 147 57.8
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 3.4e-32 142.5 147 57.8
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 7.5e-32 141.4 189 45.5
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 9.8e-32 141.0 193 49.2
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 4.9e-31 138.7 188 46.8
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 1.4e-30 137.1 146 59.6
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 3.2e-30 136.0 140 55.0
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 9.2e-30 134.4 195 46.2
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 1.2e-29 134.0 158 51.3
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 3.5e-29 132.5 196 44.4
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 4.6e-29 132.1 196 44.4
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 5.9e-29 131.7 125 63.2
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 5.9e-29 131.7 194 46.9
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 7.8e-29 131.3 198 46.5
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 1.3e-28 130.6 195 45.1
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 1.3e-28 130.6 194 45.9
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 2.9e-28 129.4 197 43.1
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 5.0e-28 128.6 196 44.9
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 5.0e-28 128.6 197 45.2
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 5.0e-28 128.6 197 44.2
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 3.3e-27 125.9 158 50.6
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 5.6e-27 125.2 193 39.9
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 2.1e-26 123.2 130 56.9
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 2.1e-26 123.2 134 55.2
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 2.8e-26 122.9 197 44.7
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 3.6e-26 122.5 197 44.7
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 8.0e-26 121.3 199 42.7
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 1.0e-25 120.9 196 40.3
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 1.0e-25 120.9 190 42.1
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 1.4e-25 120.6 145 51.0
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 1.4e-25 120.6 194 42.3
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 3.1e-25 119.4 131 55.7
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 6.8e-25 118.2 133 57.9
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 3.4e-24 115.9 194 41.2
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 1.3e-23 114.0 194 42.3
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 1.7e-23 113.6 94 67.0
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 1.7e-23 113.6 126 55.6
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 1.7e-23 113.6 195 42.1
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 2.2e-23 113.2 138 48.6
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 2.2e-23 113.2 125 56.0
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 3.7e-23 112.5 185 43.8
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 3.7e-23 112.5 136 52.9
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 3.7e-23 112.5 169 43.8
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 4.9e-23 112.1 126 55.6
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 4.9e-23 112.1 171 45.0
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 4.9e-23 112.1 174 46.6
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 1.1e-22 110.9 146 47.9
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 3.2e-22 109.4 142 51.4
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 3.2e-22 109.4 171 43.9
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 4.1e-22 109.0 163 46.0
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 7.0e-22 108.2 196 40.3
arahy.Tifrunner.gnm1.ann1.N1BBZF Arachis hypogaea HOM05D007139 ORTHO05D009171 1.6e-21 107.1 129 49.6
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 1.6e-21 107.1 183 42.1
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 3.5e-21 105.9 78 69.2
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 1.3e-20 104.0 192 38.5
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 2.3e-20 103.2 94 61.7
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 6.6e-20 101.7 197 38.6
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 2.1e-18 96.7 196 36.7
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 4.0e-17 92.4 142 45.8
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 8.9e-17 91.3 131 42.7
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 1.3e-15 87.4 126 45.2
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 4.9e-15 85.5 110 50.9
BraA10t43560Z Brassica rapa HOM05D007139 ORTHO05D009171 8.3e-15 84.7 51 76.5
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 1.1e-14 84.3 186 37.1
CBR_g22376 Chara braunii HOM05D007139 ORTHO05D009171 3.6e-10 69.3 158 36.1
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 4.7e-10 68.9 72 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2913 Anthoceros agrestis HOM05D007139 ORTHO05D009171 5.4e-06 55.5 139 39.6


User provided reference genes

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