Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0873 Ceratophyllum demersum HOM05D004249 ORTHO05D005015 2.1e-157 558.9 272 100.0
Prupe.7G269600 Prunus persica HOM05D004249 ORTHO05D005015 6.3e-85 318.2 232 65.5
MD15G1143500 Malus domestica HOM05D004249 ORTHO05D005015 8.2e-85 317.8 236 65.7
Ciclev10024361m.g Citrus clementina HOM05D004249 ORTHO05D005015 1.6e-83 313.5 237 64.1
Thecc.05G001900 Theobroma cacao HOM05D004249 ORTHO05D005015 7.7e-83 311.2 239 61.9
Atru.chr3.2004 Acer truncatum HOM05D004249 ORTHO05D005015 2.2e-82 309.7 235 64.7
Actinidia34567 Actinidia chinensis HOM05D004249 ORTHO05D005015 2.5e-81 306.2 237 60.3
Cfa008510 Carpinus fangiana HOM05D004249 ORTHO05D005015 2.5e-81 306.2 236 60.6
Duzib093G0712 Durio zibethinus HOM05D004249 ORTHO05D005015 2.5e-81 306.2 236 60.2
MBI10_g45897_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 3.2e-81 305.8 248 57.7
RcHm_v2.0_Chr2g0084541 Rosa chinensis HOM05D004249 ORTHO05D005015 4.2e-81 305.4 253 60.1
Haze_11142 Corylus avellana HOM05D004249 ORTHO05D005015 5.5e-81 305.1 260 56.5
Potri.017G007000 Populus trichocarpa HOM05D004249 ORTHO05D005015 5.5e-81 305.1 238 61.3
Haze_11140 Corylus avellana HOM05D004249 ORTHO05D005015 9.4e-81 304.3 260 56.5
Cpa.g.sc151.3 Carica papaya HOM05D004249 ORTHO05D005015 1.2e-80 303.9 216 66.2
PGSC0003DMG400025227 Solanum tuberosum HOM05D004249 ORTHO05D005015 2.7e-80 302.8 219 62.1
Peaxi162Scf01205g00038 Petunia axillaris HOM05D004249 ORTHO05D005015 3.6e-80 302.4 218 63.8
PGR042G1833 Punica granatum HOM05D004249 ORTHO05D005015 4.7e-80 302.0 236 60.2
Sopen08g005580 Solanum pennellii HOM05D004249 ORTHO05D005015 4.7e-80 302.0 222 62.6
FvH4_1g00240 Fragaria vesca HOM05D004249 ORTHO05D005015 6.1e-80 301.6 238 60.5
Migut.G00862 Erythranthe guttata HOM05D004249 ORTHO05D005015 8.0e-80 301.2 225 62.7
Cpa.g.sc151.2 Carica papaya HOM05D004249 ORTHO05D005015 1.4e-79 300.4 190 71.6
FAN26G1858 Fragaria x ananassa HOM05D004249 ORTHO05D005015 1.4e-79 300.4 212 65.1
Manes.01G010300 Manihot esculenta HOM05D004249 ORTHO05D005015 1.8e-79 300.1 239 59.8
QL10p064195 Quercus lobata HOM05D004249 ORTHO05D005015 1.8e-79 300.1 249 58.2
AUR62002468 Chenopodium quinoa HOM05D004249 ORTHO05D005015 2.3e-79 299.7 232 59.1
Hma1.2p1_0872F.1_g231130 Hydrangea macrophylla HOM05D004249 ORTHO05D005015 2.3e-79 299.7 199 67.8
GSVIVG01038246001 Vitis vinifera HOM05D004249 ORTHO05D005015 5.2e-79 298.5 217 63.6
Gorai.006G186800 Gossypium raimondii HOM05D004249 ORTHO05D005015 1.5e-78 297.0 255 56.5
Sed0024580 Sechium edule HOM05D004249 ORTHO05D005015 1.5e-78 297.0 248 57.7
TAR633G0865 Trochodendron aralioides HOM05D004249 ORTHO05D005015 3.4e-78 295.8 200 67.5
Solyc08g014600.4 Solanum lycopersicum HOM05D004249 ORTHO05D005015 7.5e-78 294.7 222 61.7
CAN.G607.4 Capsicum annuum HOM05D004249 ORTHO05D005015 9.8e-78 294.3 222 60.4
Eucgr.A00430 Eucalyptus grandis HOM05D004249 ORTHO05D005015 1.7e-77 293.5 208 63.5
Aqoxy5G00067 Aquilegia oxysepala HOM05D004249 ORTHO05D005015 6.3e-77 291.6 199 67.8
Cpa.g.sc151.4 Carica papaya HOM05D004249 ORTHO05D005015 2.4e-76 289.7 220 62.3
Cc03_g16020 Coffea canephora HOM05D004249 ORTHO05D005015 3.1e-76 289.3 213 64.3
SalBow3G0617 Salvia bowleyana HOM05D004249 ORTHO05D005015 3.5e-75 285.8 213 60.1
FAN28G1175 Fragaria x ananassa HOM05D004249 ORTHO05D005015 4.5e-75 285.4 190 67.9
PSO675G2456 Papaver somniferum HOM05D004249 ORTHO05D005015 4.5e-75 285.4 233 57.5
CARHR139100 Cardamine hirsuta HOM05D004249 ORTHO05D005015 7.7e-75 284.6 219 60.3
GSVIVG01038247001 Vitis vinifera HOM05D004249 ORTHO05D005015 7.7e-75 284.6 214 61.2
Dinv24754 Davidia involucrata HOM05D004249 ORTHO05D005015 1.3e-74 283.9 238 59.2
vmacro05005 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 2.2e-74 283.1 199 64.3
MSTRG.9267 Avicennia marina HOM05D004249 ORTHO05D005015 2.9e-74 282.7 245 56.3
AUR62002469 Chenopodium quinoa HOM05D004249 ORTHO05D005015 3.8e-74 282.3 196 64.8
Thhalv10001619m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 1.1e-73 280.8 191 66.0
PSO675G8665 Papaver somniferum HOM05D004249 ORTHO05D005015 1.1e-73 280.8 217 58.5
Os06g0153900 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 1.5e-73 280.4 222 58.6
ATR0743G017 Amborella trichopoda HOM05D004249 ORTHO05D005015 1.9e-73 280.0 211 60.2
SEGI_12768 Sequoiadendron giganteum HOM05D004249 ORTHO05D005015 1.9e-73 280.0 203 62.6
AT2G43910 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 2.5e-73 279.6 227 58.1
Aa31LG1G25620 Aethionema arabicum HOM05D004249 ORTHO05D005015 3.2e-73 279.3 192 64.1
AT2G43940 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 5.5e-73 278.5 191 64.9
BcaC02g07142 Brassica carinata HOM05D004249 ORTHO05D005015 7.2e-73 278.1 216 60.2
BolC4t28585H Brassica oleracea HOM05D004249 ORTHO05D005015 7.2e-73 278.1 216 60.2
AL4G42810 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 9.4e-73 277.7 196 64.3
A04p33130 Brassica napus HOM05D004249 ORTHO05D005015 9.4e-73 277.7 216 61.1
Oeu064015.2 Olea europaea HOM05D004249 ORTHO05D005015 1.2e-72 277.3 204 59.3
Aa31LG1G25630 Aethionema arabicum HOM05D004249 ORTHO05D005015 1.6e-72 276.9 191 64.9
AUR62023721 Chenopodium quinoa HOM05D004249 ORTHO05D005015 1.6e-72 276.9 220 57.7
unitig_0.g2413 Utricularia gibba HOM05D004249 ORTHO05D005015 2.1e-72 276.6 208 60.6
AL4G42780 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 2.7e-72 276.2 227 57.7
PSO541G6333 Papaver somniferum HOM05D004249 ORTHO05D005015 2.7e-72 276.2 209 60.3
Sp4g26030 Schrenkiella parvula HOM05D004249 ORTHO05D005015 2.7e-72 276.2 216 60.6
CsaV3_4G029860 Cucumis sativus L. HOM05D004249 ORTHO05D005015 3.6e-72 275.8 238 57.1
BraA04t18772Z Brassica rapa HOM05D004249 ORTHO05D005015 4.7e-72 275.4 216 60.6
Carub.0004s2647 Capsella rubella HOM05D004249 ORTHO05D005015 4.7e-72 275.4 202 61.4
PSO675G2958 Papaver somniferum HOM05D004249 ORTHO05D005015 6.1e-72 275.0 221 57.9
Carub.0004s2650 Capsella rubella HOM05D004249 ORTHO05D005015 1.4e-71 273.9 191 63.9
EL10Ac3g06159 Beta vulgaris HOM05D004249 ORTHO05D005015 2.3e-71 273.1 207 60.9
BcaB06g29506 Brassica carinata HOM05D004249 ORTHO05D005015 2.3e-71 273.1 192 60.9
C04p70830 Brassica napus HOM05D004249 ORTHO05D005015 2.3e-71 273.1 216 58.8
CSS0044272 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 2.3e-71 273.1 176 71.0
Thhalv10001612m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 3.0e-71 272.7 192 61.5
PSO541G3219 Papaver somniferum HOM05D004249 ORTHO05D005015 4.0e-71 272.3 233 57.5
PSO675G1470 Papaver somniferum HOM05D004249 ORTHO05D005015 5.2e-71 271.9 195 62.1
THA.LOC104802342 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 6.8e-71 271.6 205 58.0
Sabra17G0007900 Salix brachista HOM05D001637 ORTHO05D002178 8.8e-71 271.2 199 62.3
PSO675G5594 Papaver somniferum HOM05D004249 ORTHO05D005015 1.5e-70 270.4 228 56.6
THA.LOC104804252 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 1.5e-70 270.4 191 62.3
C04p70820 Brassica napus HOM05D004249 ORTHO05D005015 2.0e-70 270.0 195 60.0
A05p04060 Brassica napus HOM05D004249 ORTHO05D005015 2.6e-70 269.6 192 60.4
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-70 269.6 206 59.7
Sp4g26000 Schrenkiella parvula HOM05D004249 ORTHO05D005015 2.6e-70 269.6 192 61.5
THA.LOC104804276 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 2.6e-70 269.6 201 59.7
BcaB06g29508 Brassica carinata HOM05D004249 ORTHO05D005015 4.4e-70 268.9 188 63.8
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 7.5e-70 268.1 221 57.9
BcaC02g07143 Brassica carinata HOM05D004249 ORTHO05D005015 9.8e-70 267.7 192 59.9
BcaC02g12353 Brassica carinata HOM05D004249 ORTHO05D005015 9.8e-70 267.7 217 56.2
C04p04840 Brassica napus HOM05D004249 ORTHO05D005015 9.8e-70 267.7 217 56.2
SGA_v2.0_scaffold37G14935 Striga asiatica HOM05D004249 ORTHO05D005015 9.8e-70 267.7 202 60.4
Sp4g26010 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.3e-69 267.3 192 61.5
Hund12312 Selenicereus undatus HOM05D004249 ORTHO05D005015 1.3e-69 267.3 224 58.0
CARHR139110 Cardamine hirsuta HOM05D004249 ORTHO05D005015 1.7e-69 266.9 211 59.2
Carub.0004s2648 Capsella rubella HOM05D004249 ORTHO05D005015 2.2e-69 266.5 192 59.9
Sp4g26020 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.4e-68 263.8 197 58.9
DCAR_027496 Daucus carota HOM05D004249 ORTHO05D005015 3.1e-68 262.7 207 58.9
AT2G43920 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 2.0e-67 260.0 192 59.4
Lj6A284T20 Lonicera japonica HOM05D004249 ORTHO05D005015 7.7e-67 258.1 249 52.6
BcaB06g29349 Brassica carinata HOM05D004249 ORTHO05D005015 1.1e-65 254.2 199 60.8
FAN23G1087 Fragaria x ananassa HOM05D004249 ORTHO05D005015 2.8e-64 249.6 225 54.2
TWI15G0032 Tripterygium wilfordii HOM05D004249 ORTHO05D005015 2.8e-64 249.6 242 51.7
BolC4t28584H Brassica oleracea HOM05D004249 ORTHO05D005015 3.6e-64 249.2 184 58.7
PSO541G5503 Papaver somniferum HOM05D004249 ORTHO05D005015 6.1e-64 248.4 195 56.9
BraA04t18771Z Brassica rapa HOM05D004249 ORTHO05D005015 1.8e-63 246.9 184 58.2
BraA05t19394Z Brassica rapa HOM05D004249 ORTHO05D005015 1.8e-63 246.9 181 58.6
C04p04870 Brassica napus HOM05D004249 ORTHO05D005015 2.3e-63 246.5 198 55.6
BolC4t22117H Brassica oleracea HOM05D004249 ORTHO05D005015 2.3e-63 246.5 198 55.6
Thhalv10019674m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 4.0e-63 245.7 192 57.3
BcaB02g08894 Brassica carinata HOM05D004249 ORTHO05D005015 8.9e-63 244.6 193 56.0
SMO144G0018 Selaginella moellendorffii HOM05D004249 ORTHO05D005015 8.9e-63 244.6 191 57.6
Mapoly0115s0024 Marchantia polymorpha HOM05D004249 ORTHO05D005015 1.5e-62 243.8 212 52.8
A04p33120 Brassica napus HOM05D004249 ORTHO05D005015 2.6e-62 243.0 230 49.1
BcaC02g12352 Brassica carinata HOM05D004249 ORTHO05D005015 3.4e-62 242.7 192 56.2
A05p04090 Brassica napus HOM05D004249 ORTHO05D005015 3.7e-61 239.2 198 54.5
BraA05t19396Z Brassica rapa HOM05D004249 ORTHO05D005015 3.7e-61 239.2 198 54.5
C04p04860 Brassica napus HOM05D004249 ORTHO05D005015 8.3e-61 238.0 251 46.2
BcaB02g08889 Brassica carinata HOM05D004249 ORTHO05D005015 1.4e-60 237.3 201 54.2
Os03g0843800 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 1.8e-60 236.9 223 50.7
CiPaw.01G201200 Carya illinoinensis HOM05D004249 ORTHO05D005015 4.1e-60 235.7 250 49.6
BolC4t22116H Brassica oleracea HOM05D004249 ORTHO05D005015 3.5e-59 232.6 190 54.7
Nitab4.5_0000013g0070 Nicotiana tabacum HOM05D004249 ORTHO05D005015 7.8e-59 231.5 181 61.3
Nitab4.5_0007944g0050 Nicotiana tabacum HOM05D004249 ORTHO05D005015 6.6e-58 228.4 181 60.8
BcaB02g08886 Brassica carinata HOM05D004249 ORTHO05D005015 1.9e-57 226.9 178 57.9
AagrBONN_evm.TU.Sc2ySwM_117.2259 Anthoceros agrestis HOM05D004249 ORTHO05D005015 3.3e-57 226.1 216 48.6
PSO541G0314 Papaver somniferum HOM05D004249 ORTHO05D005015 6.2e-56 221.9 153 66.7
BcaB02g08885 Brassica carinata HOM05D004249 ORTHO05D005015 2.3e-55 219.9 197 50.8
PSO541G3414 Papaver somniferum HOM05D004249 ORTHO05D005015 5.2e-55 218.8 200 53.0
BcaB02g08891 Brassica carinata HOM05D004249 ORTHO05D005015 4.9e-53 212.2 175 56.6
HPP92_011584 Vanilla planifolia HOM05D004249 ORTHO05D005015 6.4e-53 211.8 188 54.3
BcaB06g29507 Brassica carinata HOM05D004249 ORTHO05D005015 1.1e-52 211.1 177 53.7
Nn1g09449 Nelumbo nucifera HOM05D004249 ORTHO05D005015 1.2e-51 207.6 144 66.0
Gohir.A09G169300 Gossypium hirsutum HOM05D004249 ORTHO05D005015 2.7e-51 206.5 196 52.0
Pp3c2_32550 Physcomitrium patens HOM05D004249 ORTHO05D005015 2.7e-51 206.5 217 46.5
CSS0037089 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 1.1e-49 201.1 162 61.1
Gohir.D09G165000 Gossypium hirsutum HOM05D004249 ORTHO05D005015 1.9e-49 200.3 255 44.3
COL.COLO4_19904 Corchorus olitorius HOM05D004249 ORTHO05D005015 1.2e-40 171.0 119 66.4
BolC4t22114H Brassica oleracea HOM05D004249 ORTHO05D005015 4.7e-40 169.1 123 58.5
COL.COLO4_14412 Corchorus olitorius HOM05D001637 ORTHO05D002178 1.1e-36 157.9 223 40.4
THA.LOC104824126 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 1.1e-36 157.9 113 64.6
C02p63480 Brassica napus HOM05D004249 ORTHO05D005015 5.6e-33 145.6 180 43.9
BolC8t49376H Brassica oleracea HOM05D004249 ORTHO05D005015 4.7e-32 142.5 215 40.5
C09p12990 Brassica napus HOM05D004249 ORTHO05D024151 8.1e-32 141.7 211 39.3
MCO07G181 Micromonas commoda HOM05D004249 ORTHO05D005015 1.8e-31 140.6 205 38.5
BolC7t41877H Brassica oleracea HOM05D004249 ORTHO05D005015 5.8e-30 135.6 225 39.6
PRCOL_00002738 Prasinoderma coloniale HOM05D004249 ORTHO05D005015 3.8e-29 132.9 199 36.7
AUR62023720 Chenopodium quinoa HOM05D004249 ORTHO05D005015 5.4e-28 129.0 96 61.5
HPP92_011580 Vanilla planifolia HOM05D004249 ORTHO05D005015 4.3e-25 119.4 112 53.6
MELO3C033208.2 Cucumis melo HOM05D004249 ORTHO05D005015 7.3e-25 118.6 110 54.5
ClCG04G002900 Citrullus lanatus HOM05D004249 ORTHO05D005015 8.1e-24 115.2 111 53.2
vmacro00720 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 1.1e-23 114.8 83 60.2
THA.LOC104824119 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 1.4e-23 114.4 86 57.0
Cre04.g215600 Chlamydomonas reinhardtii HOM05D004249 ORTHO05D005015 4.5e-22 109.4 214 32.7
HPP92_011579 Vanilla planifolia HOM05D004249 ORTHO05D005015 6.4e-21 105.5 78 61.5
MBI10_g23575_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 1.1e-20 104.8 117 43.6
Thhalv10001708m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 4.2e-20 102.8 69 63.8
C08p17510 Brassica napus HOM05D004249 ORTHO05D005015 9.3e-20 101.7 75 60.0
EL10Ac3g06161 Beta vulgaris HOM05D004249 ORTHO05D005015 3.0e-18 96.7 151 39.1
C08p48990 Brassica napus HOM05D004249 ORTHO05D005015 6.7e-18 95.5 74 58.1
SGA_v2.0_scaffold37G14917 Striga asiatica HOM05D004249 ORTHO05D005015 5.6e-17 92.4 170 35.3
Nn1g09453 Nelumbo nucifera HOM05D004249 ORTHO05D005015 2.8e-16 90.1 60 63.3
C03p29320 Brassica napus HOM05D004249 ORTHO05D005015 2.4e-15 87.0 148 34.5
BolC3t15278H Brassica oleracea HOM05D004249 ORTHO05D005015 2.4e-15 87.0 148 34.5
HPP92_011581 Vanilla planifolia HOM05D004249 ORTHO05D005015 9.9e-14 81.6 54 57.4
FAN23G1236 Fragaria x ananassa HOM05D004249 ORTHO05D005015 3.3e-09 66.6 44 68.2
BraA03t09486Z Brassica rapa HOM05D004249 ORTHO05D005015 3.1e-07 60.1 45 55.6
Cfa025661 Carpinus fangiana HOM05D004249 ORTHO05D005015 5.3e-07 59.3 134 31.3


User provided reference genes

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