Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 2.1e-181 639.0 362 100.0
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 4.8e-165 584.7 352 95.2
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 1.0e-146 523.9 352 84.1
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 8.8e-143 510.8 352 79.0
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 2.2e-141 506.1 351 80.6
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 2.8e-141 505.8 352 81.8
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 3.7e-141 505.4 352 79.5
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 4.8e-141 505.0 352 79.5
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 1.1e-140 503.8 352 79.3
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 1.1e-140 503.8 352 79.0
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 1.4e-140 503.4 352 80.7
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 3.1e-140 502.3 352 80.4
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 5.4e-140 501.5 353 76.5
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 7.0e-140 501.1 352 80.7
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 9.1e-140 500.7 351 82.6
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 9.1e-140 500.7 352 75.9
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 9.1e-140 500.7 352 75.9
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 9.1e-140 500.7 352 80.1
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 2.0e-139 499.6 352 76.1
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 7.7e-139 497.7 352 76.4
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 1.0e-138 497.3 352 78.7
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 8.5e-138 494.2 352 76.7
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 1.9e-137 493.0 352 75.3
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 3.2e-137 492.3 352 75.0
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 4.2e-137 491.9 352 75.3
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 1.6e-136 490.0 352 77.3
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 2.1e-136 489.6 352 78.4
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 2.8e-136 489.2 353 74.2
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 3.6e-136 488.8 353 75.4
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 4.7e-136 488.4 351 74.1
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 8.0e-136 487.6 352 73.0
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 8.0e-136 487.6 348 75.6
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 8.0e-136 487.6 352 74.4
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 8.0e-136 487.6 353 79.9
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 1.0e-135 487.3 352 73.6
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 1.4e-135 486.9 354 77.7
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 1.8e-135 486.5 352 77.8
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 2.3e-135 486.1 353 75.1
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 5.2e-135 485.0 354 74.6
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 3.4e-134 482.3 352 72.7
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 4.4e-134 481.9 348 74.7
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 5.7e-134 481.5 354 74.3
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 7.5e-134 481.1 352 72.7
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 7.5e-134 481.1 361 75.3
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 9.8e-134 480.7 352 78.1
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 1.3e-133 480.3 340 79.7
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 1.3e-133 480.3 352 72.2
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 2.2e-133 479.6 352 78.7
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 2.2e-133 479.6 352 76.7
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 2.8e-133 479.2 352 72.7
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 4.9e-133 478.4 353 77.3
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 4.9e-133 478.4 353 74.2
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 8.3e-133 477.6 349 73.9
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 1.4e-132 476.9 351 76.6
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 3.1e-132 475.7 353 77.1
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 3.1e-132 475.7 352 73.0
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.2e-131 473.8 351 76.4
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 2.0e-131 473.0 354 78.5
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 2.0e-131 473.0 354 78.5
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 4.5e-131 471.9 350 76.0
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 7.8e-131 471.1 355 78.0
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 1.0e-130 470.7 349 74.8
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 5.0e-130 468.4 350 74.3
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 6.6e-130 468.0 352 70.5
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 8.6e-130 467.6 349 77.9
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.1e-129 467.2 352 76.4
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 1.5e-129 466.8 350 74.9
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 2.5e-129 466.1 341 78.3
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 5.6e-129 464.9 353 75.9
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 7.3e-129 464.5 348 71.8
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 4.7e-128 461.8 350 74.3
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 6.1e-128 461.5 333 73.9
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 6.1e-128 461.5 327 82.9
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 8.0e-128 461.1 350 74.3
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 8.0e-128 461.1 352 74.4
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 8.0e-128 461.1 350 74.6
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 1.0e-127 460.7 350 70.9
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 2.3e-127 459.5 348 77.3
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 1.5e-126 456.8 350 70.9
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 1.5e-126 456.8 350 74.6
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 3.4e-126 455.7 330 76.7
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 9.8e-126 454.1 331 74.9
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 1.7e-125 453.4 329 76.6
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 2.2e-125 453.0 333 73.0
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 3.7e-125 452.2 329 76.3
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 2.7e-123 446.0 351 75.5
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 2.3e-122 443.0 329 80.2
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 3.9e-122 442.2 355 75.2
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.5e-121 440.3 351 74.4
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 2.5e-121 439.5 389 65.6
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 3.3e-121 439.1 345 71.6
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 7.3e-121 438.0 352 68.8
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 9.5e-121 437.6 352 69.0
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 1.2e-120 437.2 352 71.9
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 1.6e-120 436.8 351 72.6
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 6.2e-120 434.9 317 79.2
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 8.0e-120 434.5 351 73.8
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 6.8e-119 431.4 350 67.4
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 1.7e-117 426.8 353 70.3
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 1.7e-117 426.8 350 73.1
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 1.7e-117 426.8 351 70.9
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 3.7e-117 425.6 349 69.9
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 1.9e-116 423.3 312 71.5
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 5.4e-116 421.8 352 73.3
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 6.0e-115 418.3 349 66.8
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 1.0e-114 417.5 329 75.1
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 1.0e-114 417.5 329 75.1
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 1.0e-114 417.5 329 70.5
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 2.3e-114 416.4 336 65.2
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 3.9e-114 415.6 357 69.5
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 8.6e-114 414.5 353 64.9
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 1.5e-113 413.7 329 73.3
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 1.9e-113 413.3 351 67.5
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 6.2e-112 408.3 285 79.6
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 5.2e-111 405.2 290 82.4
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 8.9e-111 404.4 332 73.2
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 9.2e-108 394.4 379 66.0
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.3e-106 390.6 330 69.1
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 5.1e-106 388.7 352 59.7
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 3.3e-105 386.0 345 62.9
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 9.9e-102 374.4 286 71.3
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 9.9e-102 374.4 350 58.9
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 1.7e-98 363.6 332 59.9
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.5e-97 360.5 352 56.2
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 4.3e-97 359.0 267 72.7
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 9.6e-97 357.8 354 65.0
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.4e-95 353.2 321 58.3
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 7.6e-94 348.2 307 70.4
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 3.8e-93 345.9 278 69.4
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 1.1e-92 344.4 304 60.5
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 2.3e-90 336.7 329 56.2
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 7.3e-89 331.6 267 67.4
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 1.1e-87 327.8 357 58.0
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.4e-87 327.4 356 52.2
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 3.1e-87 326.2 205 84.9
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 4.2e-84 315.8 232 75.0
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 5.1e-82 308.9 224 75.9
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 2.1e-80 303.5 309 59.5
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 5.5e-60 235.7 159 78.0
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 6.1e-51 205.7 125 86.4
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 1.6e-35 154.5 142 66.2
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 1.4e-34 151.4 107 73.8
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 2.0e-33 147.5 107 72.9
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.2e-30 138.3 105 70.5
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 4.5e-30 136.3 102 73.5
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 5.5e-28 129.4 97 69.1
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 8.0e-27 125.6 70 84.3
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 8.0e-27 125.6 70 84.3
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 1.2e-25 121.7 70 82.9
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 4.7e-19 99.8 130 47.7
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 4.9e-16 89.7 58 86.2
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.4e-15 88.2 97 45.4
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 1.2e-14 85.1 92 51.1
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 1.2e-14 85.1 55 80.0
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 2.7e-14 84.0 81 58.0
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.8e-13 80.1 97 51.5
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 2.8e-11 73.9 42 85.7
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 5.2e-10 69.7 74 47.3
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 3.7e-08 63.5 89 43.8
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 3.2e-07 60.5 40 85.0
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 1.6e-06 58.2 38 84.2
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 2.0e-06 57.8 47 59.6
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 4.6e-06 56.6 246 25.6


User provided reference genes

Program Settings