Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 7.4e-189 663.7 328 100.0
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 1.7e-121 439.9 301 67.8
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 5.0e-121 438.3 298 69.1
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 8.6e-121 437.6 276 72.8
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 5.6e-120 434.9 284 70.4
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 7.3e-120 434.5 292 68.2
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 6.2e-119 431.4 284 69.0
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 1.4e-118 430.3 276 70.3
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 5.2e-118 428.3 276 70.3
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 4.4e-117 425.2 281 67.3
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 5.8e-117 424.9 284 67.6
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 7.5e-117 424.5 276 69.9
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 7.5e-117 424.5 276 69.9
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 9.8e-117 424.1 281 67.6
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 1.3e-116 423.7 276 69.2
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 2.2e-116 422.9 264 74.2
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 8.3e-116 421.0 281 68.0
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 1.4e-115 420.2 281 66.5
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 1.9e-115 419.9 285 67.4
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 3.2e-115 419.1 276 68.8
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 9.2e-115 417.5 277 67.9
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 9.2e-115 417.5 301 65.1
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 3.5e-114 415.6 301 63.8
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 7.8e-114 414.5 280 65.7
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 1.0e-113 414.1 302 64.6
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 1.3e-113 413.7 285 67.4
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 1.7e-113 413.3 301 65.1
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 2.3e-113 412.9 284 65.8
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 3.0e-113 412.5 282 67.4
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.3e-112 409.1 285 66.3
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 4.3e-112 408.7 284 66.2
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 5.6e-112 408.3 298 63.4
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 5.6e-112 408.3 263 70.0
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 3.6e-111 405.6 276 67.4
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 6.2e-111 404.8 315 61.6
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 1.1e-110 404.1 275 66.2
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 1.4e-110 403.7 275 66.9
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 5.2e-110 401.7 301 61.1
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 6.8e-110 401.4 265 69.1
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.2e-109 400.6 303 61.4
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.2e-109 400.6 303 62.0
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 1.5e-109 400.2 276 65.2
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 1.5e-109 400.2 318 61.6
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 5.8e-109 398.3 301 64.8
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 9.9e-109 397.5 277 63.5
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 1.7e-108 396.7 264 68.2
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 2.9e-108 396.0 302 61.3
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 2.9e-108 396.0 281 64.8
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 4.9e-108 395.2 264 68.2
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 1.1e-107 394.0 275 64.0
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 1.9e-107 393.3 276 66.7
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 3.2e-107 392.5 276 63.0
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 3.2e-107 392.5 281 64.8
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 3.2e-107 392.5 276 63.8
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 5.4e-107 391.7 285 61.8
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 1.2e-106 390.6 281 63.7
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 1.6e-106 390.2 320 59.1
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 2.1e-106 389.8 264 67.0
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 2.7e-106 389.4 276 63.4
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 4.6e-106 388.7 276 63.0
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 1.0e-105 387.5 264 65.5
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 3.0e-105 386.0 292 60.6
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 3.0e-105 386.0 275 64.4
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 6.6e-105 384.8 301 58.5
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 8.6e-105 384.4 292 60.3
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.1e-104 384.0 301 60.8
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 1.5e-104 383.6 281 62.6
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 2.5e-104 382.9 279 63.4
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 7.3e-104 381.3 366 52.7
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 7.3e-104 381.3 275 62.2
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 9.6e-104 380.9 275 62.5
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 3.6e-103 379.0 277 62.1
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 3.6e-103 379.0 301 58.1
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 3.1e-102 375.9 266 64.7
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 5.2e-102 375.2 264 64.8
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 8.9e-102 374.4 297 58.9
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 3.4e-101 372.5 264 63.3
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 5.8e-101 371.7 264 62.9
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 3.8e-100 369.0 290 60.0
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 9.3e-99 364.4 264 64.8
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 1.3e-92 344.0 241 63.9
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 6.4e-92 341.7 241 63.5
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 7.9e-82 308.1 258 59.3
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 4.8e-79 298.9 316 49.1
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 2.0e-77 293.5 219 62.6
Mapoly0014s0084 Marchantia polymorpha HOM05D006190 ORTHO05D008260 2.3e-73 280.0 285 48.1
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 5.1e-73 278.9 218 59.2
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 3.3e-72 276.2 191 63.4
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 1.3e-71 274.2 190 63.7
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 1.1e-70 271.2 266 51.9
SEGI_33791 Sequoiadendron giganteum HOM05D006190 ORTHO05D008260 1.7e-68 263.8 221 54.8
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 1.0e-65 254.6 298 44.6
TPR.G18389 Trifolium pratense HOM05D006190 ORTHO05D008260 1.1e-64 251.1 205 57.6
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 8.2e-63 245.0 397 37.8
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 4.1e-62 242.7 232 54.3
SHI10056 Sapria himalayana HOM05D006190 ORTHO05D008260 5.1e-57 225.7 212 48.6
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 2.3e-49 200.3 218 47.7
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 5.2e-49 199.1 144 65.3
Oeu015049.1 Olea europaea HOM05D006190 ORTHO05D008260 3.7e-47 193.0 134 63.4
TPR.G36458 Trifolium pratense HOM05D006190 ORTHO05D008260 5.3e-46 189.1 186 51.6
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 1.7e-44 184.1 241 41.5
Sabra14G0120600 Salix brachista HOM05D006190 ORTHO05D008260 1.0e-41 174.9 187 51.3
BcaC01g05972 Brassica carinata HOM05D006190 ORTHO05D008260 1.9e-35 154.1 169 46.7
Lsat_1_v5_gn_5_72540 Lactuca sativa HOM05D006190 ORTHO05D008260 1.4e-25 121.3 91 57.1
SHI10054 Sapria himalayana HOM05D006190 ORTHO05D000001 5.2e-25 119.4 167 40.1
C03p20570 Brassica napus HOM05D006190 ORTHO05D008260 1.3e-23 114.8 149 43.6
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 5.0e-20 102.8 103 48.5
QL08p030629 Quercus lobata HOM05D006190 ORTHO05D027094 2.5e-19 100.5 66 68.2
Hund15364 Selenicereus undatus HOM05D006190 ORTHO05D027094 3.4e-16 90.1 50 76.0
TAR020G0003 Trochodendron aralioides HOM05D006190 ORTHO05D008260 1.4e-14 84.7 55 72.7
A05p14270 Brassica napus HOM05D006190 ORTHO05D008260 1.0e-12 78.6 53 58.5
Oeu015050.1 Olea europaea HOM05D006190 ORTHO05D008260 2.3e-12 77.4 53 58.5
Lsat_1_v5_gn_1_125520 Lactuca sativa HOM05D006190 ORTHO05D008260 5.8e-08 62.8 60 53.3
BcaC02g11231 Brassica carinata HOM05D006190 ORTHO05D027094 2.9e-07 60.5 52 51.9


User provided reference genes

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