Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0712 Ceratophyllum demersum HOM05D003119 ORTHO05D003559 1.7e-215 752.3 353 100.0
Hma1.2p1_1042F.1_g251140 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 7.8e-152 540.8 309 77.7
GSVIVG01032165001 Vitis vinifera HOM05D003119 ORTHO05D003559 1.9e-150 536.2 309 76.4
TAR633G1226 Trochodendron aralioides HOM05D003119 ORTHO05D003559 2.5e-150 535.8 307 77.9
Nn7g36274 Nelumbo nucifera HOM05D003119 ORTHO05D003559 6.2e-149 531.2 308 76.9
Dinv43414 Davidia involucrata HOM05D003119 ORTHO05D003559 8.0e-149 530.8 308 77.3
Manes.10G139100 Manihot esculenta HOM05D003119 ORTHO05D003559 4.0e-148 528.5 308 76.3
Lj3g0004567 Lotus japonicus HOM05D003119 ORTHO05D003559 1.5e-147 526.6 308 76.3
TPR.G28382 Trifolium pratense HOM05D000009 ORTHO05D003559 2.0e-147 526.2 308 76.0
Cpa.g.sc125.32 Carica papaya HOM05D003119 ORTHO05D003559 4.4e-147 525.0 308 75.6
Glyma.10G091000 Glycine max HOM05D003119 ORTHO05D003559 9.8e-147 523.9 308 75.6
Lsat_1_v5_gn_4_32101 Lactuca sativa HOM05D003119 ORTHO05D003559 2.9e-146 522.3 308 76.3
Thecc.01G407300 Theobroma cacao HOM05D003119 ORTHO05D003559 2.9e-146 522.3 308 75.0
Atru.chr11.2581 Acer truncatum HOM05D003119 ORTHO05D003559 3.7e-146 521.9 339 70.8
arahy.Tifrunner.gnm1.ann1.SMYW0Q Arachis hypogaea HOM05D003119 ORTHO05D003559 3.7e-146 521.9 309 74.1
Psat5g211360 Pisum sativum HOM05D003119 ORTHO05D003559 8.3e-146 520.8 308 75.3
Duzib133G0610 Durio zibethinus HOM05D003119 ORTHO05D003559 1.1e-145 520.4 308 76.0
TWI60G0203 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 1.4e-145 520.0 308 75.3
CSS0008603 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 1.9e-145 519.6 308 74.0
CSS0027617 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 1.9e-145 519.6 308 74.0
Phvul.005G023300 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 1.9e-145 519.6 308 74.7
RcHm_v2.0_Chr1g0317311 Rosa chinensis HOM05D003119 ORTHO05D003559 1.9e-145 519.6 308 75.6
CiPaw.13G007600 Carya illinoinensis HOM05D003119 ORTHO05D003559 2.4e-145 519.2 308 74.7
Ca_14529_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 3.2e-145 518.8 308 75.0
Ciclev10030724m.g Citrus clementina HOM05D003119 ORTHO05D003559 4.1e-145 518.5 308 74.7
arahy.Tifrunner.gnm1.ann1.X582RR Arachis hypogaea HOM05D003119 ORTHO05D003559 7.0e-145 517.7 308 74.0
COL.COLO4_04878 Corchorus olitorius HOM05D003119 ORTHO05D003559 9.2e-145 517.3 309 75.7
HanXRQChr16g0524981 Helianthus annuus HOM05D003119 ORTHO05D003559 9.2e-145 517.3 308 75.0
Medtr3g032980 Medicago truncatula HOM05D003119 ORTHO05D003559 9.2e-145 517.3 308 74.7
Potri.009G058100 Populus trichocarpa HOM05D003119 ORTHO05D003559 9.2e-145 517.3 309 76.1
VMungo1080G0526 Vigna mungo HOM05D003119 ORTHO05D003559 1.2e-144 516.9 307 74.6
Gorai.004G170700 Gossypium raimondii HOM05D003119 ORTHO05D003559 2.0e-144 516.2 308 75.3
Aqoxy4G00031 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 2.7e-144 515.8 308 74.7
Rhsim07G0058300 Rhododendron simsii HOM05D003119 ORTHO05D003559 3.5e-144 515.4 308 74.7
EL10Ac2g04355 Beta vulgaris HOM05D003119 ORTHO05D003559 6.0e-144 514.6 308 74.7
THA.LOC104809848 Tarenaya hassleriana HOM05D003119 ORTHO05D003559 3.0e-143 512.3 308 75.3
CiPaw.14G002300 Carya illinoinensis HOM05D003119 ORTHO05D003559 5.0e-143 511.5 308 74.0
Gohir.A08G142900 Gossypium hirsutum HOM05D003119 ORTHO05D003559 5.0e-143 511.5 308 74.7
Migut.B01276 Erythranthe guttata HOM05D003119 ORTHO05D003559 6.6e-143 511.1 308 74.4
Lalb_Chr04g0263891 Lupinus albus HOM05D003119 ORTHO05D003559 6.6e-143 511.1 308 73.4
ECA234G0904 Erigeron canadensis HOM05D003119 ORTHO05D003559 1.5e-142 510.0 307 74.6
CAN.G219.63 Capsicum annuum HOM05D003119 ORTHO05D003559 2.5e-142 509.2 308 74.4
ATR0626G097 Amborella trichopoda HOM05D003119 ORTHO05D003559 5.6e-142 508.1 306 73.9
Sp6g30330 Schrenkiella parvula HOM05D003119 ORTHO05D003559 9.5e-142 507.3 308 73.1
Sc10g0000230 Simmondsia chinensis HOM05D003119 ORTHO05D003559 9.5e-142 507.3 308 73.1
Sopen01g034580 Solanum pennellii HOM05D003119 ORTHO05D003559 1.2e-141 506.9 308 74.4
QL04p009441 Quercus lobata HOM05D003119 ORTHO05D003559 1.6e-141 506.5 308 73.1
CsaV3_7G030810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 2.1e-141 506.1 308 73.4
SGA_v2.0_scaffold119G32756 Striga asiatica HOM05D003119 ORTHO05D003559 2.8e-141 505.8 308 72.7
Sed0001972 Sechium edule HOM05D003119 ORTHO05D003559 3.6e-141 505.4 308 72.4
Solyc01g087610.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 3.6e-141 505.4 308 74.0
FvH4_7g01470 Fragaria vesca HOM05D003119 ORTHO05D003559 8.1e-141 504.2 308 73.7
Cc02_g29010 Coffea canephora HOM05D003119 ORTHO05D003559 1.1e-140 503.8 309 73.5
FAN06G3340 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.1e-140 503.8 308 73.7
CARHR199750 Cardamine hirsuta HOM05D003119 ORTHO05D003559 1.4e-140 503.4 301 74.1
PSO063G0387 Papaver somniferum HOM05D003119 ORTHO05D003559 1.4e-140 503.4 333 68.5
BraA02t05183Z Brassica rapa HOM05D003119 ORTHO05D003559 1.8e-140 503.1 308 72.7
FAN10G2435 Fragaria x ananassa HOM05D003119 ORTHO05D003559 4.0e-140 501.9 312 72.8
AL6G24300 Arabidopsis lyrata HOM05D003119 ORTHO05D003559 8.9e-140 500.7 308 72.4
Thhalv10012727m.g Eutrema salsugineum HOM05D003119 ORTHO05D003559 8.9e-140 500.7 307 72.6
A02p02110 Brassica napus HOM05D003119 ORTHO05D003559 1.5e-139 500.0 308 72.1
PGR031G0137 Punica granatum HOM05D003119 ORTHO05D003559 2.0e-139 499.6 309 72.2
AT5G13690 Arabidopsis thaliana HOM05D003119 ORTHO05D003559 4.4e-139 498.4 308 72.4
C02p06360 Brassica napus HOM05D003119 ORTHO05D003559 4.4e-139 498.4 308 72.4
BcaNung04192 Brassica carinata HOM05D003119 ORTHO05D003559 5.8e-139 498.0 308 72.4
BolC2t06579H Brassica oleracea HOM05D003119 ORTHO05D003559 5.8e-139 498.0 308 72.4
Nitab4.5_0008441g0010 Nicotiana tabacum HOM05D003119 ORTHO05D003559 5.8e-139 498.0 299 74.6
Sabra09G0042700 Salix brachista HOM05D003119 ORTHO05D003559 5.8e-139 498.0 309 74.4
MSTRG.20565 Avicennia marina HOM05D003119 ORTHO05D003559 1.3e-138 496.9 309 73.1
Carub.0006s1185 Capsella rubella HOM05D003119 ORTHO05D003559 2.9e-138 495.7 308 72.1
Cfa010802 Carpinus fangiana HOM05D003119 ORTHO05D003559 2.4e-137 492.7 308 71.4
Zm00001eb394460 Zea mays HOM05D003119 ORTHO05D003559 4.1e-137 491.9 312 72.8
SalBow5G4976 Salvia bowleyana HOM05D003119 ORTHO05D003559 7.1e-137 491.1 336 66.7
ClCG09G003910 Citrullus lanatus HOM05D003119 ORTHO05D003559 2.3e-135 486.1 296 72.3
CANSAT80G1880 Cannabis sativa HOM05D003119 ORTHO05D003559 3.3e-134 482.3 309 70.2
vmacro13692 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 5.6e-134 481.5 397 58.4
Potri.012G075932 Populus trichocarpa HOM05D003119 ORTHO05D003559 2.8e-133 479.2 305 69.8
Dinv20699 Davidia involucrata HOM05D003119 ORTHO05D003559 8.1e-133 477.6 305 70.5
GSVIVG01007826001 Vitis vinifera HOM05D003119 ORTHO05D003559 1.4e-132 476.9 305 70.8
Actinidia04960 Actinidia chinensis HOM05D003119 ORTHO05D003559 1.8e-132 476.5 305 68.9
CSS0022012 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 2.0e-131 473.0 305 68.2
Peaxi162Scf00017g02524 Petunia axillaris HOM05D003119 ORTHO05D003559 5.8e-131 471.5 305 68.5
Thecc.03G004100 Theobroma cacao HOM05D003119 ORTHO05D003559 7.6e-131 471.1 306 69.0
PGR083G0248 Punica granatum HOM05D003119 ORTHO05D003559 9.9e-131 470.7 307 66.8
Solyc03g150154.1 Solanum lycopersicum HOM05D003119 ORTHO05D003559 2.2e-130 469.5 306 69.0
FAN01G3156 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.1e-129 467.2 332 65.7
Sopen03g032890 Solanum pennellii HOM05D003119 ORTHO05D003559 1.1e-129 467.2 305 68.9
Cc04_g12970 Coffea canephora HOM05D003119 ORTHO05D003559 1.4e-129 466.8 347 63.7
QL10p012342 Quercus lobata HOM05D003119 ORTHO05D003559 1.9e-129 466.5 305 67.9
Prupe.5G179300 Prunus persica HOM05D003119 ORTHO05D003559 3.2e-129 465.7 305 67.2
Lsat_1_v5_gn_4_73520 Lactuca sativa HOM05D003119 ORTHO05D003559 4.1e-129 465.3 335 65.1
Eucgr.B00338 Eucalyptus grandis HOM05D003119 ORTHO05D003559 7.1e-129 464.5 306 68.0
SEGI_13141 Sequoiadendron giganteum HOM05D003119 ORTHO05D003559 7.1e-129 464.5 309 66.3
Sed0021395 Sechium edule HOM05D003119 ORTHO05D003559 9.2e-129 464.2 340 62.4
TAR629G2536 Trochodendron aralioides HOM05D003119 ORTHO05D003559 1.6e-128 463.4 305 68.5
HanXRQChr09g0271871 Helianthus annuus HOM05D003119 ORTHO05D003559 2.1e-128 463.0 305 67.9
Gohir.D07G074200 Gossypium hirsutum HOM05D003119 ORTHO05D003559 3.5e-128 462.2 306 67.3
CAN.G853.14 Capsicum annuum HOM05D003119 ORTHO05D003559 4.6e-128 461.8 305 67.9
Rhsim08G0167900 Rhododendron simsii HOM05D003119 ORTHO05D003559 4.6e-128 461.8 305 65.6
CsaV3_1G001810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 7.8e-128 461.1 345 60.9
Atru.chr9.2402 Acer truncatum HOM05D003119 ORTHO05D003559 2.3e-127 459.5 306 67.0
Ciclev10018883m.g Citrus clementina HOM05D003119 ORTHO05D003559 2.3e-127 459.5 338 62.1
ECA232G0870 Erigeron canadensis HOM05D003119 ORTHO05D003559 3.9e-127 458.8 305 66.9
Manes.14G070200 Manihot esculenta HOM05D003119 ORTHO05D003559 3.9e-127 458.8 305 66.9
PSO832G2904 Papaver somniferum HOM05D003119 ORTHO05D003559 3.9e-127 458.8 305 67.9
RcHm_v2.0_Chr7g0179731 Rosa chinensis HOM05D003119 ORTHO05D003559 3.9e-127 458.8 305 67.2
Oeu018528.1 Olea europaea HOM05D003119 ORTHO05D003559 8.6e-127 457.6 314 65.6
MD14G1187100 Malus domestica HOM05D003119 ORTHO05D003559 1.1e-126 457.2 351 61.0
Duzib205G0437 Durio zibethinus HOM05D003119 ORTHO05D003559 1.9e-126 456.4 305 66.2
Nitab4.5_0003386g0030 Nicotiana tabacum HOM05D003119 ORTHO05D003559 1.9e-126 456.4 293 69.6
Lj1g0014859 Lotus japonicus HOM05D003119 ORTHO05D003559 2.5e-126 456.1 306 66.7
arahy.Tifrunner.gnm1.ann1.7YSS56 Arachis hypogaea HOM05D003119 ORTHO05D003559 3.3e-126 455.7 306 67.3
FAN18G1370 Fragaria x ananassa HOM05D003119 ORTHO05D003559 4.3e-126 455.3 306 67.0
TWI15G0194 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 5.6e-126 454.9 305 66.6
AagrBONN_evm.TU.Sc2ySwM_362.673 Anthoceros agrestis HOM05D003119 ORTHO05D003559 1.2e-125 453.8 315 65.7
FvH4_5g16380 Fragaria vesca HOM05D003119 ORTHO05D003559 1.2e-125 453.8 306 67.0
FAN13G2511 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.2e-125 453.8 306 67.0
Glyma.06G186000 Glycine max HOM05D003119 ORTHO05D003559 1.6e-125 453.4 307 66.8
Mapoly0144s0027 Marchantia polymorpha HOM05D003119 ORTHO05D003559 1.6e-125 453.4 317 64.4
TPR.G31478 Trifolium pratense HOM05D003119 ORTHO05D003559 8.1e-125 451.1 307 65.5
Psat0s489g0080 Pisum sativum HOM05D003119 ORTHO05D003559 1.1e-124 450.7 306 67.0
Aqoxy3G03116 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 1.4e-124 450.3 340 61.8
SalBow3G3123 Salvia bowleyana HOM05D003119 ORTHO05D003559 2.4e-124 449.5 318 64.5
HPP92_012082 Vanilla planifolia HOM05D003119 ORTHO05D003559 2.4e-124 449.5 276 71.4
Haze_03156 Corylus avellana HOM05D003119 ORTHO05D003559 1.5e-123 446.8 445 50.1
Gorai.001G078400 Gossypium raimondii HOM05D003119 ORTHO05D003559 5.8e-123 444.9 294 67.7
ClCG06G016700 Citrullus lanatus HOM05D003119 ORTHO05D003559 1.4e-121 440.3 325 61.5
Pp3c17_12040 Physcomitrium patens HOM05D003119 ORTHO05D003559 3.2e-121 439.1 344 59.9
Lj7C574T11 Lonicera japonica HOM05D003119 ORTHO05D003559 2.1e-120 436.4 245 77.6
Medtr3g078410 Medicago truncatula HOM05D003119 ORTHO05D003559 3.9e-119 432.2 305 65.2
VMungo1309G0904 Vigna mungo HOM05D003119 ORTHO05D003559 3.9e-119 432.2 304 65.1
Zm00001eb068240 Zea mays HOM05D003119 ORTHO05D003559 6.2e-117 424.9 305 63.3
SMO141G0099 Selaginella moellendorffii HOM05D003119 ORTHO05D003559 3.4e-115 419.1 298 63.1
vmacro19356 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 2.2e-114 416.4 290 64.1
AUR62009404 Chenopodium quinoa HOM05D003119 ORTHO05D003559 1.4e-113 413.7 246 75.2
Aa31sc576G10 Aethionema arabicum HOM05D003119 ORTHO05D003559 4.2e-113 412.1 319 63.3
Sabra12G0054100 Salix brachista HOM05D003119 ORTHO05D003559 7.4e-110 401.4 245 71.0
ATR0712G088 Amborella trichopoda HOM05D003119 ORTHO05D003559 9.6e-110 401.0 245 70.2
Peaxi162Scf00694g00125 Petunia axillaris HOM05D003119 ORTHO05D003559 9.6e-110 401.0 296 63.9
Ca_16209_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 6.2e-109 398.3 246 71.5
MBI14_g41235_MAGBIO Magnolia biondii HOM05D003119 ORTHO05D003559 1.8e-108 396.7 245 71.4
Lj9C454T4 Lonicera japonica HOM05D003119 ORTHO05D003559 6.9e-108 394.8 305 61.3
FAN08G2581 Fragaria x ananassa HOM05D003119 ORTHO05D003559 3.4e-107 392.5 307 59.6
Eucgr.G03358 Eucalyptus grandis HOM05D003119 ORTHO05D003559 4.5e-107 392.1 308 60.4
QL04p009329 Quercus lobata HOM05D003119 ORTHO05D003559 7.6e-107 391.3 295 64.1
Nitab4.5_0008927g0020 Nicotiana tabacum HOM05D003119 ORTHO05D003559 1.3e-106 390.6 233 73.4
AUR62023087 Chenopodium quinoa HOM05D003119 ORTHO05D003559 5.5e-105 385.2 308 59.7
FAN01G1325 Fragaria x ananassa HOM05D003119 ORTHO05D003559 5.5e-105 385.2 321 57.6
AUR62029809 Chenopodium quinoa HOM05D003119 ORTHO05D003559 1.8e-100 370.2 329 55.0
MELO3C017123.2 Cucumis melo HOM05D003119 ORTHO05D003559 9.0e-100 367.9 362 50.8
unitig_61.g26361 Utricularia gibba HOM05D003119 ORTHO05D003559 1.2e-99 367.5 320 57.5
arahy.Tifrunner.gnm1.ann1.MYUF54 Arachis hypogaea HOM05D003119 ORTHO05D003559 2.1e-93 346.7 233 69.5
MELO3C023569.2 Cucumis melo HOM05D003119 ORTHO05D003559 6.5e-90 335.1 207 72.9
Cpa.g.sc35.44 Carica papaya HOM05D003119 ORTHO05D003559 3.2e-89 332.8 231 66.2
Migut.D01907 Erythranthe guttata HOM05D003119 ORTHO05D003559 8.5e-82 308.1 310 48.4
MBI17_g12872_MAGBIO Magnolia biondii HOM05D003119 ORTHO05D003559 7.2e-81 305.1 184 74.5
Haze_07437 Corylus avellana HOM05D003119 ORTHO05D003559 2.7e-80 303.1 260 57.3
DCAR_026104 Daucus carota HOM05D003119 ORTHO05D003559 3.6e-80 302.8 222 64.0
HanXRQChr09g0271861 Helianthus annuus HOM05D003119 ORTHO05D003559 1.5e-78 297.4 186 71.5
MD07G1018700 Malus domestica HOM05D003119 ORTHO05D003559 2.0e-75 287.0 174 73.0
Nitab4.5_0000707g0180 Nicotiana tabacum HOM05D003119 ORTHO05D003559 1.9e-73 280.4 184 70.7
Prupe.2G020300 Prunus persica HOM05D003119 ORTHO05D003559 2.1e-72 276.9 157 77.7
Gohir.D08G163800 Gossypium hirsutum HOM05D003119 ORTHO05D003559 6.1e-72 275.4 157 78.3
DCAR_003225 Daucus carota HOM05D003119 ORTHO05D003559 1.1e-68 264.6 141 79.4
COL.COLO4_21430 Corchorus olitorius HOM05D003119 ORTHO05D003559 1.4e-68 264.2 177 68.4
Phvul.009G182100 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 5.2e-63 245.7 158 69.6
MCO16G065 Micromonas commoda HOM05D003119 ORTHO05D003559 2.4e-52 210.3 254 43.7
Os04g0650900 Oryza sativa ssp. japonica HOM05D003119 ORTHO05D003559 1.6e-51 207.6 127 70.1
HPP92_012081 Vanilla planifolia HOM05D003119 ORTHO05D003559 7.8e-43 178.7 116 68.1
HPP92_012079 Vanilla planifolia HOM05D003119 ORTHO05D003559 1.1e-41 174.9 103 72.8
TPR.G228 Trifolium pratense HOM05D003119 ORTHO05D003559 2.4e-36 157.1 97 70.1
Psat1g147240 Pisum sativum HOM05D003119 ORTHO05D003559 4.1e-36 156.4 229 37.6
Solyc03g113840.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 7.0e-36 155.6 102 65.7
QL04p008931 Quercus lobata HOM05D003119 ORTHO05D003559 6.0e-35 152.5 95 71.6
Nitab4.5_0000707g0160 Nicotiana tabacum HOM05D003119 ORTHO05D003559 3.5e-27 126.7 69 75.4
Actinidia33038 Actinidia chinensis HOM05D003119 ORTHO05D003559 6.6e-26 122.5 84 67.9
Cpa.g.sc35.41 Carica papaya HOM05D003119 ORTHO05D003559 9.2e-20 102.1 66 63.6
BcaC04g24265 Brassica carinata HOM05D003119 ORTHO05D003559 1.1e-15 88.6 51 68.6
Eucgr.J01382 Eucalyptus grandis HOM05D003119 ORTHO05D003559 2.4e-15 87.4 75 53.3
MD02G1306300 Malus domestica HOM05D003119 ORTHO05D003559 5.4e-12 76.3 38 73.7
Hma1.2p1_0002F.1_g002830 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 1.6e-11 74.7 41 73.2
arahy.Tifrunner.gnm1.ann1.P53GXH Arachis hypogaea HOM05D003119 ORTHO05D003559 3.0e-10 70.5 40 67.5
QL04p009277 Quercus lobata HOM05D003119 ORTHO05D003559 2.4e-07 60.8 34 64.7
Hund06126 Selenicereus undatus HOM05D003119 ORTHO05D003559 2.0e-06 57.8 37 67.6


User provided reference genes

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