Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 5.2e-70 267.7 145 100.0
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 4.1e-14 82.0 80 55.0
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 9.0e-14 80.9 135 40.7
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 1.3e-12 77.0 111 39.6
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 2.2e-12 76.3 144 34.0
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 6.5e-12 74.7 121 38.8
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 6.5e-12 74.7 117 41.0
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 1.1e-11 73.9 69 46.4
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 1.9e-11 73.2 144 35.4
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 1.9e-11 73.2 114 43.0
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 1.9e-11 73.2 69 46.4
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 2.5e-11 72.8 134 36.6
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 2.5e-11 72.8 126 38.9
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 3.2e-11 72.4 64 51.6
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 3.2e-11 72.4 134 36.6
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 4.2e-11 72.0 132 38.6
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 5.5e-11 71.6 162 37.0
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 5.5e-11 71.6 142 39.4
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 5.5e-11 71.6 78 46.2
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 7.2e-11 71.2 136 35.3
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 7.2e-11 71.2 110 40.9
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 1.6e-10 70.1 110 40.9
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 1.6e-10 70.1 61 57.4
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 1.6e-10 70.1 130 37.7
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 2.1e-10 69.7 132 40.9
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.1e-10 69.7 127 38.6
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.1e-10 69.7 141 39.0
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 2.1e-10 69.7 141 39.0
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 2.1e-10 69.7 114 37.7
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.7e-10 69.3 65 49.2
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 3.6e-10 68.9 141 36.9
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 3.6e-10 68.9 113 37.2
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 4.6e-10 68.6 140 37.9
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 4.6e-10 68.6 147 34.7
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 4.6e-10 68.6 126 36.5
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 4.6e-10 68.6 124 37.9
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 6.1e-10 68.2 61 55.7
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 6.1e-10 68.2 132 40.9
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 7.9e-10 67.8 49 65.3
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 7.9e-10 67.8 120 35.8
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 7.9e-10 67.8 63 47.6
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 7.9e-10 67.8 63 47.6
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 7.9e-10 67.8 49 63.3
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 1.0e-09 67.4 53 62.3
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 1.0e-09 67.4 84 44.0
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.0e-09 67.4 78 48.7
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 1.4e-09 67.0 125 36.8
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 1.4e-09 67.0 162 36.4
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 1.8e-09 66.6 149 32.2
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 1.8e-09 66.6 79 50.6
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 1.8e-09 66.6 123 39.0
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 1.8e-09 66.6 114 42.1
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 1.8e-09 66.6 132 36.4
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 1.8e-09 66.6 57 52.6
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 2.3e-09 66.2 65 52.3
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 2.3e-09 66.2 65 52.3
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 3.0e-09 65.9 49 63.3
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 3.0e-09 65.9 70 42.9
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 3.9e-09 65.5 132 33.3
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 3.9e-09 65.5 128 35.2
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 3.9e-09 65.5 48 56.2
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 5.1e-09 65.1 49 63.3
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 5.1e-09 65.1 147 34.7
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 5.1e-09 65.1 122 37.7
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 5.1e-09 65.1 136 39.0
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 5.1e-09 65.1 139 35.3
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 5.1e-09 65.1 126 35.7
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 6.7e-09 64.7 118 40.7
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 6.7e-09 64.7 158 32.9
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 6.7e-09 64.7 96 37.5
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 1.1e-08 63.9 140 34.3
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 1.5e-08 63.5 125 36.0
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 1.5e-08 63.5 128 36.7
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 1.5e-08 63.5 60 53.3
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.5e-08 63.5 128 39.8
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 1.5e-08 63.5 102 37.3
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 1.5e-08 63.5 59 49.2
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 1.5e-08 63.5 57 50.9
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 2.0e-08 63.2 102 40.2
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 2.0e-08 63.2 102 40.2
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 2.0e-08 63.2 49 59.2
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 2.5e-08 62.8 87 44.8
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 2.5e-08 62.8 160 33.1
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 2.5e-08 62.8 117 34.2
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 3.3e-08 62.4 94 41.5
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 4.3e-08 62.0 139 36.7
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 5.7e-08 61.6 97 37.1
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 7.4e-08 61.2 143 37.1
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 7.4e-08 61.2 126 34.9
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 9.7e-08 60.8 54 50.0
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 9.7e-08 60.8 54 50.0
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 1.3e-07 60.5 75 48.0
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.7e-07 60.1 75 49.3
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 1.7e-07 60.1 54 50.0
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 2.2e-07 59.7 149 33.6
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 2.8e-07 59.3 118 33.1
CDE04G0766 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 3.7e-07 58.9 74 45.9
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 4.8e-07 58.5 68 44.1
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 6.3e-07 58.2 84 40.5
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 6.3e-07 58.2 126 33.3
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 8.2e-07 57.8 71 47.9
CDE06G1771 Ceratophyllum demersum HOM05D000110 ORTHO05D000024 8.2e-07 57.8 57 49.1
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 8.2e-07 57.8 119 34.5
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 1.1e-06 57.4 110 36.4
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 1.4e-06 57.0 47 53.2
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 1.8e-06 56.6 95 35.8
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 1.8e-06 56.6 131 35.1
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 2.4e-06 56.2 111 36.0
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 4.1e-06 55.5 108 35.2
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 4.1e-06 55.5 60 50.0
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 4.1e-06 55.5 72 44.4
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 6.9e-06 54.7 83 36.1
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 6.9e-06 54.7 45 53.3
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 9.1e-06 54.3 175 26.9


User provided reference genes

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