Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0642 Ceratophyllum demersum HOM05D001789 ORTHO05D001755 2.8e-114 415.2 204 100.0
CDE06G0784 Ceratophyllum demersum HOM05D001789 ORTHO05D001755 9.1e-28 127.9 300 34.3
Gorai.013G200300 Gossypium raimondii HOM05D001789 ORTHO05D001755 1.0e-18 97.8 136 44.1
Atru.chr2.837 Acer truncatum HOM05D001789 ORTHO05D001755 2.2e-18 96.7 123 48.8
CsaV3_2G003990 Cucumis sativus L. HOM05D001789 ORTHO05D001755 2.9e-18 96.3 57 77.2
Gohir.D13G175000 Gossypium hirsutum HOM05D001789 ORTHO05D001755 5.0e-18 95.5 128 44.5
MELO3C004392.2 Cucumis melo HOM05D001789 ORTHO05D001755 6.5e-18 95.1 57 75.4
ClCG02G016750 Citrullus lanatus HOM05D001789 ORTHO05D001755 8.5e-18 94.7 103 48.5
Duzib128G1133 Durio zibethinus HOM05D001789 ORTHO05D001755 2.5e-17 93.2 58 74.1
Cfa006403 Carpinus fangiana HOM05D001789 ORTHO05D001755 4.2e-17 92.4 93 55.9
Gohir.A13G169500 Gossypium hirsutum HOM05D001789 ORTHO05D001755 7.2e-17 91.7 125 44.0
HPP92_009631 Vanilla planifolia HOM05D001789 ORTHO05D001755 9.4e-17 91.3 57 71.9
BcaC01g04353 Brassica carinata HOM05D001789 ORTHO05D001755 1.2e-16 90.9 93 53.8
A03p33800 Brassica napus HOM05D001789 ORTHO05D001755 1.2e-16 90.9 93 53.8
Manes.09G151500 Manihot esculenta HOM05D001789 ORTHO05D001755 1.6e-16 90.5 57 71.9
Potri.005G054800 Populus trichocarpa HOM05D001789 ORTHO05D001755 1.6e-16 90.5 57 73.7
TAR636G0648 Trochodendron aralioides HOM05D001789 ORTHO05D001755 1.6e-16 90.5 58 69.0
FAN09G2804 Fragaria x ananassa HOM05D001789 ORTHO05D001755 2.1e-16 90.1 99 52.5
Peaxi162Scf00282g00618 Petunia axillaris HOM05D001789 ORTHO05D001755 2.1e-16 90.1 116 42.2
Sed0022842 Sechium edule HOM05D001789 ORTHO05D001755 2.1e-16 90.1 111 44.1
Cpa.g.sc617.3 Carica papaya HOM05D001789 ORTHO05D001755 2.7e-16 89.7 123 43.9
FvH4_6g02680 Fragaria vesca HOM05D001789 ORTHO05D001755 2.7e-16 89.7 99 51.5
Nn1g02587 Nelumbo nucifera HOM05D001789 ORTHO05D001755 2.7e-16 89.7 58 67.2
CANSAT54G0997 Cannabis sativa HOM05D001789 ORTHO05D001755 3.6e-16 89.4 58 69.0
Cc02_g30810 Coffea canephora HOM05D001789 ORTHO05D001755 3.6e-16 89.4 94 48.9
COL.COLO4_15370 Corchorus olitorius HOM05D001789 ORTHO05D001755 3.6e-16 89.4 58 67.2
ECA238G2814 Erigeron canadensis HOM05D001789 ORTHO05D001755 3.6e-16 89.4 97 49.5
FAN02G1989 Fragaria x ananassa HOM05D001789 ORTHO05D001755 3.6e-16 89.4 99 51.5
BraA01t04507Z Brassica rapa HOM05D001789 ORTHO05D001755 6.1e-16 88.6 93 51.6
CiPaw.07G068600 Carya illinoinensis HOM05D001789 ORTHO05D001755 6.1e-16 88.6 150 42.0
C03p41100 Brassica napus HOM05D001789 ORTHO05D001755 8.0e-16 88.2 93 52.7
RcHm_v2.0_Chr3g0450651 Rosa chinensis HOM05D001789 ORTHO05D001755 8.0e-16 88.2 99 50.5
SalBow8G2035 Salvia bowleyana HOM05D001789 ORTHO05D001755 8.0e-16 88.2 58 65.5
PGR004G2017 Punica granatum HOM05D001789 ORTHO05D001755 1.0e-15 87.8 57 70.2
SalBow8G1668 Salvia bowleyana HOM05D001789 ORTHO05D001755 1.0e-15 87.8 110 43.6
BcaB04g19305 Brassica carinata HOM05D001789 ORTHO05D001755 1.4e-15 87.4 60 68.3
Lsat_1_v5_gn_2_64421 Lactuca sativa HOM05D001789 ORTHO05D001755 1.4e-15 87.4 121 43.0
Potri.013G042300 Populus trichocarpa HOM05D001789 ORTHO05D001755 1.4e-15 87.4 55 72.7
CARHR078940 Cardamine hirsuta HOM05D001789 ORTHO05D001755 1.8e-15 87.0 97 50.5
Ciclev10028402m.g Citrus clementina HOM05D001789 ORTHO05D001755 1.8e-15 87.0 59 72.9
Oeu016446.1 Olea europaea HOM05D001789 ORTHO05D000116 1.8e-15 87.0 54 72.2
MSTRG.20457 Avicennia marina HOM05D001789 ORTHO05D001755 4.0e-15 85.9 98 46.9
Thhalv10020698m.g Eutrema salsugineum HOM05D001789 ORTHO05D001755 4.0e-15 85.9 94 51.1
THA.LOC104821668 Tarenaya hassleriana HOM05D001789 ORTHO05D001755 4.0e-15 85.9 58 69.0
Solyc01g097190.4 Solanum lycopersicum HOM05D001789 ORTHO05D001755 5.2e-15 85.5 93 49.5
GSVIVG01036270001 Vitis vinifera HOM05D001789 ORTHO05D001755 5.2e-15 85.5 122 40.2
BcaB04g21349 Brassica carinata HOM05D001789 ORTHO05D001755 6.7e-15 85.1 57 68.4
BcaC09g47780 Brassica carinata HOM05D001789 ORTHO05D001755 6.7e-15 85.1 57 68.4
BNapus_Darmor_BZH_scaffold_78p00990 Brassica napus HOM05D001789 ORTHO05D001755 6.7e-15 85.1 57 68.4
Sopen01g040860 Solanum pennellii HOM05D001789 ORTHO05D001755 6.7e-15 85.1 93 49.5
Sp3g03550 Schrenkiella parvula HOM05D001789 ORTHO05D001755 8.8e-15 84.7 98 50.0
Lju50C34T11 Lonicera japonica HOM05D001789 ORTHO05D001755 1.2e-14 84.3 122 41.8
TAR365G0302 Trochodendron aralioides HOM05D001789 ORTHO05D001755 1.2e-14 84.3 52 73.1
Carub.0003s0386 Capsella rubella HOM05D001789 ORTHO05D001755 1.5e-14 84.0 58 67.2
Eucgr.H04321 Eucalyptus grandis HOM05D001789 ORTHO05D001755 1.5e-14 84.0 52 71.2
PSO384G1410 Papaver somniferum HOM05D001789 ORTHO05D001755 1.5e-14 84.0 99 48.5
Thecc.05G281000 Theobroma cacao HOM05D001789 ORTHO05D001755 1.5e-14 84.0 52 73.1
AT3G04710 Arabidopsis thaliana HOM05D001789 ORTHO05D001755 2.0e-14 83.6 57 68.4
arahy.Tifrunner.gnm1.ann1.JN9GN2 Arachis hypogaea HOM05D001789 ORTHO05D001755 2.0e-14 83.6 61 68.9
CAN.G134.77 Capsicum annuum HOM05D001789 ORTHO05D001755 2.0e-14 83.6 63 61.9
CAN.G134.81 Capsicum annuum HOM05D001789 ORTHO05D001755 2.6e-14 83.2 63 61.9
Migut.B01098 Erythranthe guttata HOM05D001789 ORTHO05D001755 2.6e-14 83.2 58 62.1
Lj1g0007033 Lotus japonicus HOM05D001789 ORTHO05D001755 2.6e-14 83.2 57 70.2
Aa31LG5G15100 Aethionema arabicum HOM05D001789 ORTHO05D001755 3.3e-14 82.8 58 67.2
AL3G14790 Arabidopsis lyrata HOM05D001789 ORTHO05D001755 3.3e-14 82.8 57 68.4
arahy.Tifrunner.gnm1.ann1.K1HEIP Arachis hypogaea HOM05D001789 ORTHO05D001755 3.3e-14 82.8 54 72.2
Haze_04374 Corylus avellana HOM05D001789 ORTHO05D001755 3.3e-14 82.8 118 43.2
Dinv20290 Davidia involucrata HOM05D001789 ORTHO05D001755 3.3e-14 82.8 122 41.8
Psat0s1144g0120 Pisum sativum HOM05D001789 ORTHO05D001755 3.3e-14 82.8 93 48.4
Ca_09427_v3 Cicer arietinum L. HOM05D001789 ORTHO05D001755 4.4e-14 82.4 54 68.5
HanXRQChr14g0446601 Helianthus annuus HOM05D001789 ORTHO05D001755 4.4e-14 82.4 50 74.0
Nitab4.5_0006088g0040 Nicotiana tabacum HOM05D001789 ORTHO05D001755 4.4e-14 82.4 99 44.4
DCAR_006649 Daucus carota HOM05D001789 ORTHO05D001755 7.5e-14 81.6 53 66.0
Nitab4.5_0009495g0030 Nicotiana tabacum HOM05D001789 ORTHO05D001755 7.5e-14 81.6 63 58.7
PSO339G5673 Papaver somniferum HOM05D001789 ORTHO05D001755 7.5e-14 81.6 99 47.5
CSS0016190 Camellia sinensis var. sinensis HOM05D001789 ORTHO05D001755 9.7e-14 81.3 123 42.3
vmacro13812 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 1.3e-13 80.9 52 69.2
unitig_37.g12638 Utricularia gibba HOM05D001789 ORTHO05D001755 2.2e-13 80.1 54 63.0
MD04G1226000 Malus domestica HOM05D001789 ORTHO05D001755 2.8e-13 79.7 50 76.0
Prupe.6G344800 Prunus persica HOM05D001789 ORTHO05D001755 2.8e-13 79.7 50 76.0
TPR.G7003 Trifolium pratense HOM05D001789 ORTHO05D001755 2.8e-13 79.7 58 63.8
Glyma.19G245700 Glycine max HOM05D001789 ORTHO05D001755 4.8e-13 79.0 58 63.8
Phvul.006G102400 Phaseolus vulgaris HOM05D001789 ORTHO05D001755 4.8e-13 79.0 58 65.5
SGA_v2.0_scaffold36G14395 Striga asiatica HOM05D001789 ORTHO05D001755 4.8e-13 79.0 58 58.6
Ah.06g192110 Amaranthus hybridus HOM05D001789 ORTHO05D001755 8.2e-13 78.2 113 41.6
Manes.08G136000 Manihot esculenta HOM05D001789 ORTHO05D001755 8.2e-13 78.2 51 66.7
Sc15g0002530 Simmondsia chinensis HOM05D001789 ORTHO05D001755 8.2e-13 78.2 122 42.6
Glyma.03G247600 Glycine max HOM05D001789 ORTHO05D001755 1.1e-12 77.8 58 63.8
Rhsim07G0074300 Rhododendron simsii HOM05D001789 ORTHO05D001755 1.1e-12 77.8 52 65.4
Actinidia18365 Actinidia chinensis HOM05D001789 ORTHO05D001755 1.4e-12 77.4 52 65.4
Aqoxy2G03554 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 1.4e-12 77.4 53 67.9
AUR62001052 Chenopodium quinoa HOM05D001789 ORTHO05D001755 1.4e-12 77.4 52 67.3
AUR62004900 Chenopodium quinoa HOM05D001789 ORTHO05D001755 1.4e-12 77.4 52 67.3
Haze_04373 Corylus avellana HOM05D001789 ORTHO05D001755 1.8e-12 77.0 92 47.8
Aqoxy4G01666 Aquilegia oxysepala HOM05D001053 ORTHO05D001755 3.1e-12 76.3 125 36.8
VMungo0540G0629 Vigna mungo HOM05D001789 ORTHO05D001755 3.1e-12 76.3 58 62.1
Medtr7g115280 Medicago truncatula HOM05D001789 ORTHO05D001755 4.1e-12 75.9 93 45.2
EL10Ac4g09088 Beta vulgaris HOM05D001789 ORTHO05D001755 5.3e-12 75.5 219 28.3
Aqoxy3G03319 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 7.0e-12 75.1 125 36.8
Dinv34576 Davidia involucrata HOM05D001789 ORTHO05D010416 7.0e-12 75.1 58 51.7
Sabra05G0168200 Salix brachista HOM05D001789 ORTHO05D001755 9.1e-12 74.7 94 44.7
TWI56G1124 Tripterygium wilfordii HOM05D001789 ORTHO05D001755 9.1e-12 74.7 52 63.5
PSO478G4273 Papaver somniferum HOM05D001789 ORTHO05D001755 1.2e-11 74.3 94 43.6
SEGI_21200 Sequoiadendron giganteum HOM05D001789 ORTHO05D001755 1.2e-11 74.3 49 63.3
Rhsim01G0268800 Rhododendron simsii HOM05D001789 ORTHO05D001755 1.6e-11 73.9 119 37.0
Aqoxy4G01760 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 2.0e-11 73.6 125 36.0
Os05g0103600 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 2.7e-11 73.2 59 57.6
Aqoxy7G03203 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 7.7e-11 71.6 125 35.2
Lalb_Chr18g0043931 Lupinus albus HOM05D001789 ORTHO05D001755 7.7e-11 71.6 94 43.6
Sabra05G0047600 Salix brachista HOM05D001789 ORTHO05D001755 7.7e-11 71.6 51 66.7
Solyc01g097220.3 Solanum lycopersicum HOM05D001789 ORTHO05D001755 1.7e-10 70.5 99 39.4
Sopen01g040890 Solanum pennellii HOM05D001789 ORTHO05D001755 1.7e-10 70.5 99 39.4
CAN.G134.83 Capsicum annuum HOM05D001789 ORTHO05D001755 2.2e-10 70.1 56 57.1
vmacro14863 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 3.8e-10 69.3 119 35.3
Psat4g049680 Pisum sativum HOM05D001789 ORTHO05D001755 6.5e-10 68.6 108 37.0
Aqoxy2G03556 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 8.5e-10 68.2 96 36.5
PSO017G4575 Papaver somniferum HOM05D001789 ORTHO05D001755 8.5e-10 68.2 94 38.3
PGSC0003DMG400027510 Solanum tuberosum HOM05D001789 ORTHO05D001755 8.5e-10 68.2 93 38.7
Rhsim01G0268700 Rhododendron simsii HOM05D001789 ORTHO05D001755 1.1e-09 67.8 115 34.8
Cc01_g18750 Coffea canephora HOM05D001789 ORTHO05D001755 1.9e-09 67.0 106 37.7
ATR0665G154 Amborella trichopoda HOM05D001789 ORTHO05D001755 5.5e-09 65.5 119 38.7
AagrBONN_evm.TU.Sc2ySwM_368.3405 Anthoceros agrestis HOM05D001789 ORTHO05D001755 5.5e-09 65.5 90 44.4
PSO017G2802 Papaver somniferum HOM05D001789 ORTHO05D001755 7.2e-09 65.1 92 38.0
PSO339G1265 Papaver somniferum HOM05D001789 ORTHO05D001755 7.2e-09 65.1 122 35.2
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.2e-08 64.3 95 37.9
PSO170G3495 Papaver somniferum HOM05D001789 ORTHO05D001755 2.1e-08 63.5 103 38.8
PSO384G2589 Papaver somniferum HOM05D001789 ORTHO05D001755 2.1e-08 63.5 96 38.5
PSO421G0436 Papaver somniferum HOM05D001789 ORTHO05D001755 2.7e-08 63.2 103 39.8
PGSC0003DMG400019459 Solanum tuberosum HOM05D001789 ORTHO05D001755 2.7e-08 63.2 84 38.1
PSO063G6555 Papaver somniferum HOM05D001789 ORTHO05D001755 3.6e-08 62.8 98 40.8
PSO170G3794 Papaver somniferum HOM05D001789 ORTHO05D001755 3.6e-08 62.8 98 39.8
PSO339G0965 Papaver somniferum HOM05D001789 ORTHO05D001755 3.6e-08 62.8 96 37.5
Nn1g02591 Nelumbo nucifera HOM05D001789 ORTHO05D001755 6.1e-08 62.0 51 56.9
PSO384G4611 Papaver somniferum HOM05D001789 ORTHO05D001755 6.1e-08 62.0 65 44.6
PSO384G0184 Papaver somniferum HOM05D001789 ORTHO05D001755 8.0e-08 61.6 93 36.6
PSO063G5539 Papaver somniferum HOM05D001789 ORTHO05D001755 1.0e-07 61.2 92 40.2
PSO339G3442 Papaver somniferum HOM05D001789 ORTHO05D001755 1.0e-07 61.2 93 36.6
PSO478G0068 Papaver somniferum HOM05D001789 ORTHO05D001755 1.0e-07 61.2 110 39.1
Potri.005G219201 Populus trichocarpa HOM05D001789 ORTHO05D001755 1.0e-07 61.2 87 43.7
CSS0005239 Camellia sinensis var. sinensis HOM05D001789 ORTHO05D001755 1.8e-07 60.5 104 34.6
PSO063G3347 Papaver somniferum HOM05D001789 ORTHO05D001755 1.8e-07 60.5 126 33.3
Aqoxy2G03731 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 2.3e-07 60.1 58 50.0
Aqoxy3G02736 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 2.3e-07 60.1 107 29.9
PSO782G4634 Papaver somniferum HOM05D001789 ORTHO05D001755 2.3e-07 60.1 102 36.3
COL.COLO4_03560 Corchorus olitorius HOM05D001789 ORTHO05D001755 3.0e-07 59.7 58 48.3
Manes.05G085350 Manihot esculenta HOM05D001789 ORTHO05D001755 3.0e-07 59.7 116 35.3
PSO017G4312 Papaver somniferum HOM05D001789 ORTHO05D001755 3.0e-07 59.7 106 38.7
Zm00001eb356200 Zea mays HOM05D001789 ORTHO05D001755 3.0e-07 59.7 93 36.6
Aqoxy5G00331 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 4.0e-07 59.3 88 34.1
PSO017G7195 Papaver somniferum HOM05D001789 ORTHO05D001755 4.0e-07 59.3 106 33.0
PSO675G3161 Papaver somniferum HOM05D001789 ORTHO05D001755 5.2e-07 58.9 91 35.2
PSO782G4460 Papaver somniferum HOM05D001789 ORTHO05D001755 6.8e-07 58.5 58 53.4
CBR_g50831 Chara braunii HOM05D001789 ORTHO05D001755 1.2e-06 57.8 50 50.0
Lj2A1158T42 Lonicera japonica HOM05D001789 ORTHO05D001755 1.2e-06 57.8 72 40.3
PSO675G7970 Papaver somniferum HOM05D001789 ORTHO05D001755 1.2e-06 57.8 91 36.3
Manes.05G085300 Manihot esculenta HOM05D001789 ORTHO05D001755 2.0e-06 57.0 109 33.9
PSO017G4288 Papaver somniferum HOM05D001789 ORTHO05D001755 4.4e-06 55.8 91 35.2
PSO675G2961 Papaver somniferum HOM05D001789 ORTHO05D001755 4.4e-06 55.8 85 37.6
PSO675G9018 Papaver somniferum HOM05D001789 ORTHO05D001755 4.4e-06 55.8 99 37.4
Mapoly0028s0042 Marchantia polymorpha HOM05D001789 ORTHO05D001755 5.7e-06 55.5 55 49.1
PSO017G4820 Papaver somniferum HOM05D001789 ORTHO05D001755 5.7e-06 55.5 81 38.3
PSO782G1762 Papaver somniferum HOM05D001789 ORTHO05D001755 5.7e-06 55.5 58 50.0
Pp3c26_10740 Physcomitrium patens HOM05D001789 ORTHO05D001755 7.5e-06 55.1 56 41.1
PSO675G6771 Papaver somniferum HOM05D001789 ORTHO05D001755 9.8e-06 54.7 47 53.2
PSO675G8957 Papaver somniferum HOM05D001789 ORTHO05D001755 9.8e-06 54.7 114 34.2


User provided reference genes

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