Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0597 Ceratophyllum demersum HOM05D005850 ORTHO05D007405 3.6e-45 184.5 89 100.0
Prupe.7G227200 Prunus persica HOM05D005850 ORTHO05D007405 5.9e-24 114.0 101 58.4
CSS0027687 Camellia sinensis var. sinensis HOM05D005850 ORTHO05D007405 1.3e-23 112.8 102 55.9
FvH4_1g05370 Fragaria vesca HOM05D005850 ORTHO05D007405 1.3e-23 112.8 91 62.6
Cpa.g.sc23.140 Carica papaya HOM05D005850 ORTHO05D007405 2.9e-23 111.7 90 62.2
FAN19G1578 Fragaria x ananassa HOM05D005850 ORTHO05D007405 2.9e-23 111.7 91 61.5
FAN28G1812 Fragaria x ananassa HOM05D005850 ORTHO05D007405 5.0e-23 110.9 91 61.5
THA.LOC104808745 Tarenaya hassleriana HOM05D005850 ORTHO05D007405 6.5e-23 110.5 94 59.6
CSS0006300 Camellia sinensis var. sinensis HOM05D005850 ORTHO05D007405 1.1e-22 109.8 102 54.9
CSS0015458 Camellia sinensis var. sinensis HOM05D005850 ORTHO05D007405 1.1e-22 109.8 102 54.9
FAN26G3074 Fragaria x ananassa HOM05D005850 ORTHO05D007405 1.5e-22 109.4 91 60.4
Nitab4.5_0004979g0100 Nicotiana tabacum HOM05D005850 ORTHO05D007405 1.5e-22 109.4 101 55.4
Hma1.2p1_1968F.1_g309450 Hydrangea macrophylla HOM05D005850 ORTHO05D007405 3.2e-22 108.2 96 57.3
Atru.chr7.1296 Acer truncatum HOM05D005850 ORTHO05D007405 4.2e-22 107.8 96 57.3
Dinv41576 Davidia involucrata HOM05D005850 ORTHO05D007405 4.2e-22 107.8 91 58.2
Potri.018G076700 Populus trichocarpa HOM05D005850 ORTHO05D007405 4.2e-22 107.8 93 57.0
HPP92_003437 Vanilla planifolia HOM05D005850 ORTHO05D007405 4.2e-22 107.8 100 57.0
FAN26G0510 Fragaria x ananassa HOM05D005850 ORTHO05D007405 5.5e-22 107.5 91 59.3
Ciclev10008544m.g Citrus clementina HOM05D005850 ORTHO05D007405 7.2e-22 107.1 91 59.3
Aqoxy7G01830 Aquilegia oxysepala HOM05D005850 ORTHO05D007405 9.4e-22 106.7 98 56.1
Nitab4.5_0010299g0010 Nicotiana tabacum HOM05D005850 ORTHO05D007405 9.4e-22 106.7 101 53.5
Eucgr.C04135 Eucalyptus grandis HOM05D005850 ORTHO05D007405 1.2e-21 106.3 90 56.7
Glyma.09G227900 Glycine max HOM05D005850 ORTHO05D007405 1.2e-21 106.3 100 54.0
Glyma.12G008700 Glycine max HOM05D005850 ORTHO05D007405 1.2e-21 106.3 100 54.0
QL02p086096 Quercus lobata HOM05D005850 ORTHO05D007405 1.2e-21 106.3 97 53.6
Rhsim01G0091700 Rhododendron simsii HOM05D005850 ORTHO05D007405 1.6e-21 105.9 91 56.0
CiPaw.03G235100 Carya illinoinensis HOM05D005850 ORTHO05D007405 2.1e-21 105.5 93 57.0
RcHm_v2.0_Chr2g0091051 Rosa chinensis HOM05D005850 ORTHO05D007405 2.1e-21 105.5 91 58.2
AT4G13400 Arabidopsis thaliana HOM05D005850 ORTHO05D007405 2.7e-21 105.1 90 60.0
BcaC02g09427 Brassica carinata HOM05D005850 ORTHO05D007405 2.7e-21 105.1 99 56.6
C04p42500 Brassica napus HOM05D005850 ORTHO05D007405 2.7e-21 105.1 99 56.6
BolC4t25826H Brassica oleracea HOM05D005850 ORTHO05D007405 2.7e-21 105.1 99 56.6
Cc06_g09340 Coffea canephora HOM05D005850 ORTHO05D007405 2.7e-21 105.1 90 56.7
Nn8g39265 Nelumbo nucifera HOM05D005850 ORTHO05D007405 2.7e-21 105.1 91 59.3
Sabra18G0064500 Salix brachista HOM05D005850 ORTHO05D007405 2.7e-21 105.1 91 56.0
AUR62033401 Chenopodium quinoa HOM05D005850 ORTHO05D007405 3.6e-21 104.8 93 54.8
PSO782G2614 Papaver somniferum HOM05D005850 ORTHO05D007405 4.7e-21 104.4 100 54.0
MD00G1220200 Malus domestica HOM05D005850 ORTHO05D007405 8.0e-21 103.6 91 57.1
MD02G1062200 Malus domestica HOM05D005850 ORTHO05D007405 8.0e-21 103.6 91 57.1
Hund09181 Selenicereus undatus HOM05D005850 ORTHO05D007405 1.0e-20 103.2 90 54.4
A04p08720 Brassica napus HOM05D005850 ORTHO05D007405 1.4e-20 102.8 99 55.6
BraA04t16569Z Brassica rapa HOM05D005850 ORTHO05D007405 1.4e-20 102.8 99 55.6
Aa31LG9G4350 Aethionema arabicum HOM05D005850 ORTHO05D007405 2.3e-20 102.1 90 57.8
AL9U10250 Arabidopsis lyrata HOM05D005850 ORTHO05D007405 2.3e-20 102.1 90 57.8
VMungo1127G0399 Vigna mungo HOM05D005850 ORTHO05D007405 3.0e-20 101.7 100 52.0
Os05g0556000 Oryza sativa ssp. japonica HOM05D005850 ORTHO05D007405 4.0e-20 101.3 101 51.5
Phvul.011G012400 Phaseolus vulgaris HOM05D005850 ORTHO05D007405 4.0e-20 101.3 93 55.9
AUR62011029 Chenopodium quinoa HOM05D005850 ORTHO05D007405 5.2e-20 100.9 102 51.0
BcaB03g16095 Brassica carinata HOM05D005850 ORTHO05D007405 6.8e-20 100.5 90 57.8
Thhalv10025099m.g Eutrema salsugineum HOM05D005850 ORTHO05D007405 6.8e-20 100.5 90 57.8
Sp7g10960 Schrenkiella parvula HOM05D005850 ORTHO05D007405 6.8e-20 100.5 90 56.7
Thecc.09G114700 Theobroma cacao HOM05D005850 ORTHO05D007405 6.8e-20 100.5 99 50.5
GSVIVG01015433001 Vitis vinifera HOM05D005850 ORTHO05D007405 6.8e-20 100.5 102 51.0
Carub.0007s2916 Capsella rubella HOM05D005850 ORTHO05D007405 8.8e-20 100.1 90 60.0
CANSAT56G0565 Cannabis sativa HOM05D005850 ORTHO05D007405 1.2e-19 99.8 101 50.5
MD02G1050500 Malus domestica HOM05D005850 ORTHO05D007405 1.2e-19 99.8 91 56.0
DCAR_028730 Daucus carota HOM05D005850 ORTHO05D007405 2.0e-19 99.0 90 54.4
ECA234G3981 Erigeron canadensis HOM05D005850 ORTHO05D007405 2.0e-19 99.0 91 53.8
Lj3g0026332 Lotus japonicus HOM05D005850 ORTHO05D007405 2.0e-19 99.0 101 52.5
Sopen04g019720 Solanum pennellii HOM05D005850 ORTHO05D007405 2.6e-19 98.6 89 55.1
Actinidia20338 Actinidia chinensis HOM05D005850 ORTHO05D007405 3.4e-19 98.2 91 54.9
COL.COLO4_34934 Corchorus olitorius HOM05D005850 ORTHO05D007405 3.4e-19 98.2 100 51.0
CsaV3_2G002440 Cucumis sativus L. HOM05D005850 ORTHO05D007405 3.4e-19 98.2 93 53.8
Duzib168G1614 Durio zibethinus HOM05D005850 ORTHO05D007405 3.4e-19 98.2 92 54.3
Gohir.D06G059100 Gossypium hirsutum HOM05D005850 ORTHO05D007405 3.4e-19 98.2 97 51.5
Gorai.010G068900 Gossypium raimondii HOM05D005850 ORTHO05D007405 3.4e-19 98.2 97 51.5
arahy.Tifrunner.gnm1.ann1.2WTJ41 Arachis hypogaea HOM05D005850 ORTHO05D007405 5.7e-19 97.4 101 49.5
arahy.Tifrunner.gnm1.ann1.JQ4W8U Arachis hypogaea HOM05D005850 ORTHO05D007405 5.7e-19 97.4 101 49.5
MELO3C004544.2 Cucumis melo HOM05D005850 ORTHO05D007405 9.8e-19 96.7 90 53.3
FAN23G2543 Fragaria x ananassa HOM05D005850 ORTHO05D007405 1.3e-18 96.3 88 56.8
Sed0018565 Sechium edule HOM05D005850 ORTHO05D007405 1.3e-18 96.3 93 50.5
Ca_14665_v3 Cicer arietinum L. HOM05D005850 ORTHO05D007405 1.7e-18 95.9 86 57.0
MBI01_g03369_MAGBIO Magnolia biondii HOM05D005850 ORTHO05D007405 1.7e-18 95.9 90 55.6
Migut.J01174 Erythranthe guttata HOM05D005850 ORTHO05D007405 2.8e-18 95.1 93 51.6
TPR.G30190 Trifolium pratense HOM05D005850 ORTHO05D007405 2.8e-18 95.1 87 55.2
MSTRG.19610 Avicennia marina HOM05D005850 ORTHO05D007405 3.7e-18 94.7 94 50.0
HanXRQChr12g0355831 Helianthus annuus HOM05D005850 ORTHO05D007405 4.8e-18 94.4 91 52.7
unitig_22.g6630 Utricularia gibba HOM05D005850 ORTHO05D007405 4.8e-18 94.4 91 52.7
Lsat_1_v5_gn_5_100240 Lactuca sativa HOM05D005850 ORTHO05D007405 6.3e-18 94.0 106 47.2
Cfa003291 Carpinus fangiana HOM05D005850 ORTHO05D007405 1.1e-17 93.2 120 45.0
Medtr0314s0030 Medicago truncatula HOM05D005850 ORTHO05D007405 1.1e-17 93.2 86 55.8
Psat0s3467g0080 Pisum sativum HOM05D005850 ORTHO05D007405 1.8e-17 92.4 86 54.7
vmacro20668 Vaccinium macrocarpon HOM05D005850 ORTHO05D007405 3.1e-17 91.7 77 58.4
Sc07g0007400 Simmondsia chinensis HOM05D005850 ORTHO05D007405 4.1e-17 91.3 91 51.6
ATR0037G042 Amborella trichopoda HOM05D005850 ORTHO05D007405 5.4e-17 90.9 93 53.8
Lalb_Chr19g0140271 Lupinus albus HOM05D005850 ORTHO05D007405 1.2e-16 89.7 93 49.5
MD02G1053400 Malus domestica HOM05D005850 ORTHO05D007405 3.5e-16 88.2 85 51.8
PGR102G2365 Punica granatum HOM05D005850 ORTHO05D007405 7.7e-16 87.0 70 62.9
Haze_25682 Corylus avellana HOM05D005850 ORTHO05D007405 1.7e-15 85.9 144 36.8
PSO063G4477 Papaver somniferum HOM05D005850 ORTHO05D007405 2.9e-15 85.1 70 60.0
Thhalv10025558m.g Eutrema salsugineum HOM05D005850 ORTHO05D007405 3.8e-15 84.7 73 58.9
Zm00001eb343200 Zea mays HOM05D005850 ORTHO05D007405 1.5e-14 82.8 88 46.6
Gohir.A06G060700 Gossypium hirsutum HOM05D005850 ORTHO05D007405 9.5e-14 80.1 70 57.1
CBR_g37310 Chara braunii HOM05D005850 ORTHO05D007405 4.0e-12 74.7 88 43.2
EL10Ac8g18542 Beta vulgaris HOM05D005850 ORTHO05D007405 7.5e-11 70.5 56 53.6
MD02G1055700 Malus domestica HOM05D005850 ORTHO05D007405 2.8e-10 68.6 73 50.7
Mapoly0029s0010 Marchantia polymorpha HOM05D005850 ORTHO05D007405 1.8e-09 65.9 88 39.8
SMO266G0057 Selaginella moellendorffii HOM05D005850 ORTHO05D007405 1.8e-09 65.9 70 48.6
Cre02.g104100 Chlamydomonas reinhardtii HOM05D005850 ORTHO05D007405 1.7e-07 59.3 87 37.9
FvH4_4g25970 Fragaria vesca HOM05D005850 ORTHO05D007405 3.3e-06 55.1 66 47.0
Peaxi162Scf00560g00069 Petunia axillaris HOM05D005850 ORTHO05D036566 5.6e-06 54.3 49 51.0
Ah.14g081400 Amaranthus hybridus HOM05D005850 ORTHO05D007405 7.3e-06 53.9 54 51.9


User provided reference genes

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