Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 6.7e-185 651.0 444 100.0
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 8.1e-122 441.4 447 67.3
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.6e-93 347.4 416 63.2
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.1e-86 324.7 243 77.8
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.1e-86 324.7 243 77.8
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.6e-85 320.9 243 77.4
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 6.7e-84 315.5 256 76.2
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 1.1e-83 314.7 406 65.5
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 1.5e-83 314.3 249 72.7
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 1.6e-82 310.8 410 67.6
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 2.4e-81 307.0 206 83.0
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 4.0e-81 306.2 406 64.5
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 5.3e-81 305.8 209 84.2
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 1.2e-80 304.7 249 71.1
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 3.4e-80 303.1 415 60.0
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 4.5e-80 302.8 264 71.2
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 7.6e-80 302.0 255 71.8
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.3e-79 301.2 410 64.1
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 1.7e-79 300.8 406 62.1
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 1.7e-79 300.8 253 71.5
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 2.2e-79 300.4 206 83.0
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 3.8e-79 299.7 401 66.6
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 5.0e-79 299.3 412 61.7
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 5.0e-79 299.3 439 62.6
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 5.0e-79 299.3 255 68.6
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 6.5e-79 298.9 412 66.3
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 1.1e-78 298.1 412 66.0
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.4e-78 297.7 208 80.8
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 1.4e-78 297.7 243 76.1
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 1.9e-78 297.4 255 71.0
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 3.2e-78 296.6 206 81.6
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 4.2e-78 296.2 249 70.7
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 4.2e-78 296.2 411 61.1
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 7.1e-78 295.4 244 70.9
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 9.3e-78 295.0 243 72.8
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.2e-77 294.7 206 80.6
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 2.1e-77 293.9 243 73.7
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 2.1e-77 293.9 245 73.1
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 2.1e-77 293.9 251 72.1
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 3.5e-77 293.1 255 69.8
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 4.6e-77 292.7 407 58.0
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 6.1e-77 292.4 451 53.7
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 6.1e-77 292.4 251 70.9
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 6.1e-77 292.4 419 64.9
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 6.1e-77 292.4 410 61.5
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 1.3e-76 291.2 243 73.3
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.3e-76 291.2 208 81.7
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.3e-76 291.2 257 69.6
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.8e-76 290.8 415 61.7
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 3.9e-76 289.7 395 62.8
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 3.9e-76 289.7 406 55.9
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 5.1e-76 289.3 413 60.3
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 6.7e-76 288.9 209 80.4
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 6.7e-76 288.9 261 67.4
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 8.7e-76 288.5 243 71.6
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.1e-75 288.1 409 61.4
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 1.5e-75 287.7 270 68.9
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 3.3e-75 286.6 419 57.8
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 4.3e-75 286.2 447 53.5
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 1.3e-74 284.6 251 70.9
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 1.3e-74 284.6 252 67.5
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 1.6e-74 284.3 454 51.5
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 3.7e-74 283.1 207 77.8
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 4.8e-74 282.7 429 55.5
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 6.3e-74 282.3 456 51.3
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 8.2e-74 282.0 197 80.7
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 1.1e-73 281.6 407 58.7
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.1e-73 281.6 465 59.4
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 1.1e-73 281.6 262 65.6
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 1.8e-73 280.8 259 65.6
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 1.8e-73 280.8 242 68.2
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 2.4e-73 280.4 264 67.4
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 2.4e-73 280.4 248 66.5
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 6.9e-73 278.9 409 60.9
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 7.7e-72 275.4 269 64.7
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.7e-71 274.2 206 79.1
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 3.8e-71 273.1 211 73.5
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 6.5e-71 272.3 266 65.8
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 6.5e-71 272.3 420 61.0
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 1.9e-70 270.8 269 64.3
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.5e-70 270.4 206 76.7
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 2.5e-70 270.4 267 64.0
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.5e-70 270.4 147 91.2
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 3.2e-70 270.0 189 77.8
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 9.4e-70 268.5 160 81.2
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.1e-69 267.3 160 81.2
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 6.1e-69 265.8 160 81.2
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 5.1e-68 262.7 161 80.1
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.3e-66 258.1 222 69.8
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 7.7e-64 248.8 272 63.6
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 1.0e-63 248.4 227 66.5
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 5.0e-63 246.1 160 75.6
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 8.5e-63 245.4 160 74.4
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 8.5e-63 245.4 160 74.4
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 8.5e-63 245.4 160 74.4
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 8.5e-63 245.4 226 65.9
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 7.2e-62 242.3 160 73.8
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 3.6e-61 240.0 160 73.1
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 3.6e-61 240.0 159 74.2
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 1.2e-56 224.9 160 71.9
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 1.5e-54 218.0 160 68.8
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 1.9e-54 217.6 201 58.2
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.1e-46 191.8 159 62.3
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.1e-46 191.8 159 62.3
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 3.6e-45 186.8 155 72.3
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.8e-44 184.5 161 60.2
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.8e-44 184.5 161 60.2
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 3.1e-41 173.7 152 62.5
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 1.1e-30 138.7 222 44.6
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 2.2e-26 124.4 162 46.3
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 9.2e-25 119.0 161 43.5
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 2.5e-22 110.9 158 43.7
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 6.0e-16 89.7 139 39.6
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 1.6e-13 81.6 57 70.2
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 4.0e-12 77.0 156 34.6
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 2.0e-11 74.7 95 49.5
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.9e-09 68.2 109 55.0
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 1.0e-07 62.4 82 45.1
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 1.1e-06 58.9 111 34.2
HPP92_023605 Vanilla planifolia HOM05D006571 ORTHO05D007771 1.5e-06 58.5 113 54.9


User provided reference genes

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